RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 RAPGEF2Q9Y4G8 1499 aa2.29□□□□□ -2.04
XRN1-207ENST00000468894 IGHV2OR16-5A0A0B4J2B6 119 aa2.29□□□□□ -2.04
XRN1-207ENST00000468894 DAPL1A0PJW8 107 aa2.29□□□□□ -2.04
XRN1-207ENST00000468894 FAM92AA1XBS5 289 aa2.29□□□□□ -2.04
XRN1-207ENST00000468894 C5orf58C9J3I9 102 aa2.29□□□□□ -2.04
XRN1-207ENST00000468894 RGS5O15539 181 aa2.29□□□□□ -2.04
XRN1-207ENST00000468894 OR7C1O76099 320 aaPredicted RBP2.29□□□□□ -2.04
XRN1-207ENST00000468894 ATG12O94817 140 aa2.29□□□□□ -2.04
XRN1-207ENST00000468894 IFNA4P05014 189 aa2.29□□□□□ -2.04
XRN1-207ENST00000468894 CRYGDP07320 174 aa2.29□□□□□ -2.04
XRN1-207ENST00000468894 ZNF708P17019 499 aa2.29□□□□□ -2.04
XRN1-207ENST00000468894 USF1P22415 310 aaPredicted RBP2.29□□□□□ -2.04
XRN1-207ENST00000468894 HIST1H1TP22492 207 aaPredicted RBP2.29□□□□□ -2.04
XRN1-207ENST00000468894 RBP2P50120 134 aa2.29□□□□□ -2.04
XRN1-207ENST00000468894 GZMMP51124 257 aa2.29□□□□□ -2.04
XRN1-207ENST00000468894 FABP6P51161 128 aa2.29□□□□□ -2.04
XRN1-207ENST00000468894 OR12D2P58182 307 aa2.29□□□□□ -2.04
XRN1-207ENST00000468894 RHOBP62745 196 aa2.29□□□□□ -2.04
XRN1-207ENST00000468894 HIST1H3AP68431 136 aa2.29□□□□□ -2.04
XRN1-207ENST00000468894 HPCAP84074 193 aa2.29□□□□□ -2.04
XRN1-207ENST00000468894 H3F3AP84243 136 aa2.29□□□□□ -2.04
XRN1-207ENST00000468894 SMAGPQ0VAQ4 97 aa2.29□□□□□ -2.04
XRN1-207ENST00000468894 RSU1Q15404 277 aa2.29□□□□□ -2.04
XRN1-207ENST00000468894 TMEM78Q5T7P6 136 aa2.29□□□□□ -2.04
XRN1-207ENST00000468894 N4BP2L1Q5TBK1 243 aaPredicted RBP2.29□□□□□ -2.04
XRN1-207ENST00000468894 ALKAL1Q6UXT8 129 aa2.29□□□□□ -2.04
XRN1-207ENST00000468894 RASSF6Q6ZTQ3 369 aa2.29□□□□□ -2.04
XRN1-207ENST00000468894 HIST2H3AQ71DI3 136 aa2.29□□□□□ -2.04
XRN1-207ENST00000468894 GAPTQ8N292 157 aa2.29□□□□□ -2.04
XRN1-207ENST00000468894 OR1L8Q8NGR8 309 aa2.29□□□□□ -2.04
XRN1-207ENST00000468894 SKA2Q8WVK7 121 aaPredicted RBP2.29□□□□□ -2.04
XRN1-207ENST00000468894 DDIT4LQ96D03 193 aa2.29□□□□□ -2.04
XRN1-207ENST00000468894 SMARCD1Q96GM5 515 aa2.29□□□□□ -2.04
XRN1-207ENST00000468894 C18orf15Q96N68 181 aa2.29□□□□□ -2.04
XRN1-207ENST00000468894 OR52B2Q96RD2 323 aa2.29□□□□□ -2.04
XRN1-207ENST00000468894 MARVELD1Q9BSK0 173 aa2.29□□□□□ -2.04
XRN1-207ENST00000468894 FBXL15Q9H469 300 aa2.29□□□□□ -2.04
XRN1-207ENST00000468894 VSIRQ9H7M9 311 aa2.29□□□□□ -2.04
XRN1-207ENST00000468894 LINC00574Q9H8X3 128 aa2.29□□□□□ -2.04
XRN1-207ENST00000468894 SPANXCQ9NY87 97 aa2.29□□□□□ -2.04
XRN1-207ENST00000468894 ANGPT4Q9Y264 503 aa2.29□□□□□ -2.04
XRN1-207ENST00000468894 BCORL1Q5H9F3 1711 aa2.28□□□□□ -2.04
XRN1-207ENST00000468894 CCDC180Q9P1Z9 1646 aa2.28□□□□□ -2.04
XRN1-207ENST00000468894 HECW2Q9P2P5 1572 aa2.28□□□□□ -2.04
XRN1-207ENST00000468894 FAM240AA0A1B0GVK7 77 aa2.28□□□□□ -2.04
XRN1-207ENST00000468894 A0A1W2PRE2 83 aa2.28□□□□□ -2.04
XRN1-207ENST00000468894 SLC22A1O15245 554 aa2.28□□□□□ -2.04
XRN1-207ENST00000468894 TCF21O43680 179 aa2.28□□□□□ -2.04
XRN1-207ENST00000468894 ORC5O43913 435 aa2.28□□□□□ -2.04
XRN1-207ENST00000468894 PFN1P07737 140 aaKnown RBP2.28□□□□□ -2.04
XRN1-207ENST00000468894 PGA4P0DJD7 388 aa2.28□□□□□ -2.04
XRN1-207ENST00000468894 PGA3P0DJD8 388 aa2.28□□□□□ -2.04
XRN1-207ENST00000468894 OR13C7P0DN81 318 aa2.28□□□□□ -2.04
XRN1-207ENST00000468894 PSMB9P28065 219 aa2.28□□□□□ -2.04
XRN1-207ENST00000468894 SDC4P31431 198 aa2.28□□□□□ -2.04
XRN1-207ENST00000468894 GLRXP35754 106 aa2.28□□□□□ -2.04
XRN1-207ENST00000468894 AKR1D1P51857 326 aa2.28□□□□□ -2.04
XRN1-207ENST00000468894 TCTAP57738 103 aa2.28□□□□□ -2.04
XRN1-207ENST00000468894 TAS2R43P59537 309 aa2.28□□□□□ -2.04
XRN1-207ENST00000468894 MAXP61244 160 aa2.28□□□□□ -2.04
XRN1-207ENST00000468894 RRAS2P62070 204 aaPredicted RBP2.28□□□□□ -2.04
XRN1-207ENST00000468894 CDK10Q15131 360 aa2.28□□□□□ -2.04
XRN1-207ENST00000468894 TNFAIP8L3Q5GJ75 292 aa2.28□□□□□ -2.04
XRN1-207ENST00000468894 CLEC12AQ5QGZ9 265 aa2.28□□□□□ -2.04
XRN1-207ENST00000468894 SPATA31B1PQ5VZV4 182 aa2.28□□□□□ -2.04
XRN1-207ENST00000468894 PRSS54Q6PEW0 395 aa2.28□□□□□ -2.04
XRN1-207ENST00000468894 DOLPP1Q86YN1 238 aa2.28□□□□□ -2.04
XRN1-207ENST00000468894 UMODL1-AS1Q8N2C9 162 aa2.28□□□□□ -2.04
XRN1-207ENST00000468894 OR13C6PQ8NH95 151 aa2.28□□□□□ -2.04
XRN1-207ENST00000468894 C1orf54Q8WWF1 131 aa2.28□□□□□ -2.04
XRN1-207ENST00000468894 TCEAL7Q9BRU2 100 aa2.28□□□□□ -2.04
XRN1-207ENST00000468894 MND1Q9BWT6 205 aa2.28□□□□□ -2.04
XRN1-207ENST00000468894 COA1Q9GZY4 146 aa2.28□□□□□ -2.04
XRN1-207ENST00000468894 NIT2Q9NQR4 276 aa2.28□□□□□ -2.04
XRN1-207ENST00000468894 RBM22Q9NW64 420 aaKnown RBP eCLIP2.28□□□□□ -2.04
XRN1-207ENST00000468894 RAB22AQ9UL26 194 aa2.28□□□□□ -2.04
XRN1-207ENST00000468894 PKIGQ9Y2B9 76 aa2.28□□□□□ -2.04
XRN1-207ENST00000468894 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.28□□□□□ -2.04
XRN1-207ENST00000468894 RBM7Q9Y580 266 aaKnown RBP2.28□□□□□ -2.04
XRN1-207ENST00000468894 NUP210LQ5VU65 1888 aa2.28□□□□□ -2.04
XRN1-207ENST00000468894 SRCAPQ6ZRS2 3230 aa2.28□□□□□ -2.04
XRN1-207ENST00000468894 NUP205Q92621 2012 aa2.27□□□□□ -2.05
XRN1-207ENST00000468894 WRNQ14191 1432 aaPredicted RBP eCLIP2.27□□□□□ -2.05
XRN1-207ENST00000468894 FAM135BQ49AJ0 1406 aa2.27□□□□□ -2.05
XRN1-207ENST00000468894 DOCK4Q8N1I0 1966 aa2.27□□□□□ -2.05
XRN1-207ENST00000468894 ANAPC1Q9H1A4 1944 aa2.27□□□□□ -2.05
XRN1-207ENST00000468894 A0A087WX48 190 aa2.27□□□□□ -2.05
XRN1-207ENST00000468894 OR5H14A6NHG9 310 aa2.27□□□□□ -2.05
XRN1-207ENST00000468894 FAM25AB3EWG3 89 aa2.27□□□□□ -2.05
XRN1-207ENST00000468894 FAM25CB3EWG5 89 aa2.27□□□□□ -2.05
XRN1-207ENST00000468894 FAM25GB3EWG6 89 aa2.27□□□□□ -2.05
XRN1-207ENST00000468894 G3V2T6 193 aa2.27□□□□□ -2.05
XRN1-207ENST00000468894 UPK1BO75841 260 aa2.27□□□□□ -2.05
XRN1-207ENST00000468894 S100A8P05109 93 aa2.27□□□□□ -2.05
XRN1-207ENST00000468894 PGA5P0DJD9 388 aa2.27□□□□□ -2.05
XRN1-207ENST00000468894 CXCL3P19876 107 aa2.27□□□□□ -2.05
XRN1-207ENST00000468894 TSPOP30536 169 aa2.27□□□□□ -2.05
XRN1-207ENST00000468894 PHBP35232 272 aa2.27□□□□□ -2.05
XRN1-207ENST00000468894 MPV17P39210 176 aa2.27□□□□□ -2.05
XRN1-207ENST00000468894 EIF2B2P49770 351 aaKnown RBP2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms