RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 TFF3Q07654 80 aa13.06□□□□□ -0.32
CHD1L-205ENST00000467213 Q6ZWC4 215 aa13.06□□□□□ -0.32
CHD1L-205ENST00000467213 OR4B1Q8NGF8 309 aa13.06□□□□□ -0.32
CHD1L-205ENST00000467213 C11orf52Q96A22 123 aa13.06□□□□□ -0.32
CHD1L-205ENST00000467213 TAAR6Q96RI8 345 aa13.06□□□□□ -0.32
CHD1L-205ENST00000467213 AKIRIN1Q9H9L7 192 aaPredicted RBP13.06□□□□□ -0.32
CHD1L-205ENST00000467213 TP53TG3Q9ULZ0 132 aa13.06□□□□□ -0.32
CHD1L-205ENST00000467213 RBM7Q9Y580 266 aaKnown RBP13.06□□□□□ -0.32
CHD1L-205ENST00000467213 NUPR1O60356 82 aa13.06□□□□□ -0.32
CHD1L-205ENST00000467213 WDR1O75083 606 aa13.06□□□□□ -0.32
CHD1L-205ENST00000467213 IL6RP08887 468 aaPredicted RBP13.06□□□□□ -0.32
CHD1L-205ENST00000467213 KITLGP21583 273 aa13.06□□□□□ -0.32
CHD1L-205ENST00000467213 RPL29P47914 159 aaKnown RBP13.06□□□□□ -0.32
CHD1L-205ENST00000467213 OR10G8Q8NGN5 311 aa13.06□□□□□ -0.32
CHD1L-205ENST00000467213 PARD6AQ9NPB6 346 aa13.06□□□□□ -0.32
CHD1L-205ENST00000467213 AURKAIP1Q9NWT8 199 aaPredicted RBP13.06□□□□□ -0.32
CHD1L-205ENST00000467213 MRPS17Q9Y2R5 130 aaKnown RBP13.06□□□□□ -0.32
CHD1L-205ENST00000467213 ASCC3Q8N3C0 2202 aaKnown RBP13.06□□□□□ -0.32
CHD1L-205ENST00000467213 ZNF891A8MT65 544 aaPredicted RBP13.05□□□□□ -0.32
CHD1L-205ENST00000467213 STAG3L2P0CL84 134 aa13.05□□□□□ -0.32
CHD1L-205ENST00000467213 STAG3L3P0CL85 134 aa13.05□□□□□ -0.32
CHD1L-205ENST00000467213 RPP30P78346 268 aaKnown RBP13.05□□□□□ -0.32
CHD1L-205ENST00000467213 RPL19P84098 196 aaKnown RBP13.05□□□□□ -0.32
CHD1L-205ENST00000467213 TRA2AQ13595 282 aaKnown RBP eCLIP13.05□□□□□ -0.321e-7■■■□□ 17
CHD1L-205ENST00000467213 PRRG4Q9BZD6 226 aa13.05□□□□□ -0.32
CHD1L-205ENST00000467213 NDUFB4O95168 129 aa13.05□□□□□ -0.32
CHD1L-205ENST00000467213 CXorf1O96002 111 aa13.05□□□□□ -0.32
CHD1L-205ENST00000467213 LINC00310P59036 64 aa13.05□□□□□ -0.32
CHD1L-205ENST00000467213 MRPS11P82912 194 aaKnown RBP13.05□□□□□ -0.32
CHD1L-205ENST00000467213 ZNF705AQ6ZN79 300 aaPredicted RBP13.05□□□□□ -0.32
CHD1L-205ENST00000467213 ABHD3Q8WU67 409 aa13.05□□□□□ -0.32
CHD1L-205ENST00000467213 RTL8AQ9BWD3 113 aa13.05□□□□□ -0.32
CHD1L-205ENST00000467213 ZDHHC11Q9H8X9 412 aa13.05□□□□□ -0.32
CHD1L-205ENST00000467213 LPAR2Q9HBW0 351 aa13.05□□□□□ -0.32
CHD1L-205ENST00000467213 EYSQ5T1H1 3165 aa13.04□□□□□ -0.32
CHD1L-205ENST00000467213 OR2H2O95918 312 aa13.04□□□□□ -0.32
CHD1L-205ENST00000467213 IRF2P14316 349 aa13.04□□□□□ -0.32
CHD1L-205ENST00000467213 ZNF16P17020 682 aaPredicted RBP13.04□□□□□ -0.32
CHD1L-205ENST00000467213 EN2P19622 333 aaPredicted RBP13.04□□□□□ -0.32
CHD1L-205ENST00000467213 CD82P27701 267 aa13.04□□□□□ -0.32
CHD1L-205ENST00000467213 CLEC12BQ2HXU8 276 aa13.04□□□□□ -0.32
CHD1L-205ENST00000467213 COL5A1-AS1Q5SY13 56 aa13.04□□□□□ -0.32
CHD1L-205ENST00000467213 FAM180AQ6UWF9 173 aa13.04□□□□□ -0.32
CHD1L-205ENST00000467213 OR5AU1Q8NGC0 362 aa13.04□□□□□ -0.32
CHD1L-205ENST00000467213 OCIAD1Q9NX40 245 aa13.04□□□□□ -0.32
CHD1L-205ENST00000467213 GON4LQ3T8J9 2241 aa13.04□□□□□ -0.32
CHD1L-205ENST00000467213 MT-ND6P03923 174 aa13.04□□□□□ -0.32
CHD1L-205ENST00000467213 CRISP2P16562 243 aa13.04□□□□□ -0.32
CHD1L-205ENST00000467213 PLP2Q04941 152 aa13.04□□□□□ -0.32
CHD1L-205ENST00000467213 VAMP8Q9BV40 100 aa13.04□□□□□ -0.32
CHD1L-205ENST00000467213 QTRT1Q9BXR0 403 aaKnown RBP13.04□□□□□ -0.32
CHD1L-205ENST00000467213 GNB1LQ9BYB4 327 aa13.04□□□□□ -0.32
CHD1L-205ENST00000467213 CLN8Q9UBY8 286 aa13.04□□□□□ -0.32
CHD1L-205ENST00000467213 A0A1W2PR80 420 aa13.03□□□□□ -0.32
CHD1L-205ENST00000467213 CDIPTO14735 213 aa13.03□□□□□ -0.32
CHD1L-205ENST00000467213 SH2D1BO14796 132 aa13.03□□□□□ -0.32
CHD1L-205ENST00000467213 HMGB3O15347 200 aaKnown RBP13.03□□□□□ -0.32
CHD1L-205ENST00000467213 RBFOX2O43251 390 aaKnown RBP eCLIP13.03□□□□□ -0.323e-13■■■■□ 26.2
CHD1L-205ENST00000467213 NXPH2O95156 264 aa13.03□□□□□ -0.32
CHD1L-205ENST00000467213 OR10J4P0C629 311 aa13.03□□□□□ -0.32
CHD1L-205ENST00000467213 C1QTNF9P0C862 333 aa13.03□□□□□ -0.32
CHD1L-205ENST00000467213 RAC2P15153 192 aa13.03□□□□□ -0.32
CHD1L-205ENST00000467213 AREGP15514 252 aa13.03□□□□□ -0.32
CHD1L-205ENST00000467213 TOMM20LQ6UXN7 152 aa13.03□□□□□ -0.32
CHD1L-205ENST00000467213 OR52E5Q8NH55 327 aa13.03□□□□□ -0.32
CHD1L-205ENST00000467213 SDSLQ96GA7 329 aa13.03□□□□□ -0.32
CHD1L-205ENST00000467213 ZNF488Q96MN9 340 aa13.03□□□□□ -0.32
CHD1L-205ENST00000467213 OR2J1Q9GZK6 312 aa13.03□□□□□ -0.32
CHD1L-205ENST00000467213 ZFP30Q9Y2G7 519 aa13.03□□□□□ -0.32
CHD1L-205ENST00000467213 KMT2EQ8IZD2 1858 aa13.03□□□□□ -0.32
CHD1L-205ENST00000467213 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.03□□□□□ -0.32
CHD1L-205ENST00000467213 C15orf62A8K5M9 175 aa13.03□□□□□ -0.32
CHD1L-205ENST00000467213 ZG16O60844 167 aa13.03□□□□□ -0.32
CHD1L-205ENST00000467213 OR10J3Q5JRS4 329 aa13.03□□□□□ -0.32
CHD1L-205ENST00000467213 SLC35E4Q6ICL7 350 aa13.03□□□□□ -0.32
CHD1L-205ENST00000467213 RNF2Q99496 336 aa13.03□□□□□ -0.32
CHD1L-205ENST00000467213 A0A0G2JMM0 328 aa13.03□□□□□ -0.32
CHD1L-205ENST00000467213 A0A1W2PPB8 328 aa13.03□□□□□ -0.32
CHD1L-205ENST00000467213 A0A1W2PPV4 95 aa13.03□□□□□ -0.32
CHD1L-205ENST00000467213 A0A1W2PRS3 328 aa13.03□□□□□ -0.32
CHD1L-205ENST00000467213 KIR3DP1A8MWS1 328 aa13.03□□□□□ -0.32
CHD1L-205ENST00000467213 ATP5G3P48201 142 aa13.03□□□□□ -0.32
CHD1L-205ENST00000467213 COMPP49747 757 aaPredicted RBP13.03□□□□□ -0.32
CHD1L-205ENST00000467213 LGALS4P56470 323 aa13.03□□□□□ -0.32
CHD1L-205ENST00000467213 PMP22Q01453 160 aa13.03□□□□□ -0.32
CHD1L-205ENST00000467213 DCAF12Q5T6F0 453 aa13.03□□□□□ -0.32
CHD1L-205ENST00000467213 GALMQ96C23 342 aa13.03□□□□□ -0.32
CHD1L-205ENST00000467213 HSD17B10Q99714 261 aaKnown RBP13.03□□□□□ -0.32
CHD1L-205ENST00000467213 GP6Q9HCN6 339 aa13.03□□□□□ -0.32
CHD1L-205ENST00000467213 TMEM30CPA0ZSE6 113 aa13.02□□□□□ -0.32
CHD1L-205ENST00000467213 NGFP01138 241 aa13.02□□□□□ -0.32
CHD1L-205ENST00000467213 RFPL3SP0C7P2 107 aa13.02□□□□□ -0.32
CHD1L-205ENST00000467213 G6PCP35575 357 aa13.02□□□□□ -0.32
CHD1L-205ENST00000467213 ZNF718Q3SXZ3 478 aa13.02□□□□□ -0.32
CHD1L-205ENST00000467213 WIPI1Q5MNZ9 446 aaPredicted RBP13.02□□□□□ -0.32
CHD1L-205ENST00000467213 IL17BQ9UHF5 180 aa13.02□□□□□ -0.32
CHD1L-205ENST00000467213 SLC45A2Q9UMX9 530 aa13.02□□□□□ -0.32
CHD1L-205ENST00000467213 TRBV20OR9-2A0A075B6H5 130 aa13.02□□□□□ -0.33
CHD1L-205ENST00000467213 TRGV10A0A0A0MS01 117 aa13.02□□□□□ -0.33
CHD1L-205ENST00000467213 OOEPA6NGQ2 149 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms