RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 AESQ08117 197 aa1.97□□□□□ -2.09
CDC42BPA-211ENST00000466538 SMAGPQ0VAQ4 97 aa1.97□□□□□ -2.09
CDC42BPA-211ENST00000466538 EBPQ15125 230 aaKnown RBP1.97□□□□□ -2.09
CDC42BPA-211ENST00000466538 CCDC112Q8NEF3 446 aa1.97□□□□□ -2.09
CDC42BPA-211ENST00000466538 OR4K13Q8NH42 304 aa1.97□□□□□ -2.09
CDC42BPA-211ENST00000466538 PIGXQ8TBF5 258 aa1.97□□□□□ -2.09
CDC42BPA-211ENST00000466538 SLC37A2Q8TED4 501 aa1.97□□□□□ -2.09
CDC42BPA-211ENST00000466538 ASB13Q8WXK3 278 aa1.97□□□□□ -2.09
CDC42BPA-211ENST00000466538 RAB8BQ92930 207 aa1.97□□□□□ -2.09
CDC42BPA-211ENST00000466538 CAPZA3Q96KX2 299 aa1.97□□□□□ -2.09
CDC42BPA-211ENST00000466538 TBX5Q99593 518 aa1.97□□□□□ -2.09
CDC42BPA-211ENST00000466538 TLNRD1Q9H1K6 362 aa1.97□□□□□ -2.09
CDC42BPA-211ENST00000466538 PAQR5Q9NXK6 330 aaPredicted RBP1.97□□□□□ -2.09
CDC42BPA-211ENST00000466538 HHLA2Q9UM44 414 aa1.97□□□□□ -2.09
CDC42BPA-211ENST00000466538 HEY1Q9Y5J3 304 aa1.97□□□□□ -2.09
CDC42BPA-211ENST00000466538 CRB1P82279 1406 aa1.97□□□□□ -2.09
CDC42BPA-211ENST00000466538 TRPM3Q9HCF6 1732 aaPredicted RBP1.97□□□□□ -2.09
CDC42BPA-211ENST00000466538 A0A1W2PP64 1363 aa1.97□□□□□ -2.09
CDC42BPA-211ENST00000466538 FLT4P35916 1363 aa1.97□□□□□ -2.09
CDC42BPA-211ENST00000466538 DHRS12A0PJE2 317 aa1.96□□□□□ -2.1
CDC42BPA-211ENST00000466538 ZNF878C9JN71 531 aa1.96□□□□□ -2.1
CDC42BPA-211ENST00000466538 FADS1O60427 444 aa1.96□□□□□ -2.1
CDC42BPA-211ENST00000466538 DEDDO75618 318 aa1.96□□□□□ -2.1
CDC42BPA-211ENST00000466538 CIAO1O76071 339 aa1.96□□□□□ -2.1
CDC42BPA-211ENST00000466538 IFNA16P05015 189 aa1.96□□□□□ -2.1
CDC42BPA-211ENST00000466538 CALB1P05937 261 aa1.96□□□□□ -2.1
CDC42BPA-211ENST00000466538 RPS12P25398 132 aaKnown RBP1.96□□□□□ -2.1
CDC42BPA-211ENST00000466538 IDH3GP51553 393 aaPredicted RBP1.96□□□□□ -2.1
CDC42BPA-211ENST00000466538 DEFA6Q01524 100 aa1.96□□□□□ -2.1
CDC42BPA-211ENST00000466538 ZNF117Q03924 483 aa1.96□□□□□ -2.1
CDC42BPA-211ENST00000466538 OR2F1Q13607 317 aa1.96□□□□□ -2.1
CDC42BPA-211ENST00000466538 HTR4Q13639 388 aa1.96□□□□□ -2.1
CDC42BPA-211ENST00000466538 OGFRL1Q5TC84 451 aaPredicted RBP1.96□□□□□ -2.1
CDC42BPA-211ENST00000466538 LCN8Q6JVE9 175 aa1.96□□□□□ -2.1
CDC42BPA-211ENST00000466538 SFXN4Q6P4A7 337 aa1.96□□□□□ -2.1
CDC42BPA-211ENST00000466538 OR5B17Q8NGF7 314 aa1.96□□□□□ -2.1
CDC42BPA-211ENST00000466538 OR4C16Q8NGL9 310 aa1.96□□□□□ -2.1
CDC42BPA-211ENST00000466538 OPTNQ96CV9 577 aa1.96□□□□□ -2.1
CDC42BPA-211ENST00000466538 CCDC42Q96M95 316 aa1.96□□□□□ -2.1
CDC42BPA-211ENST00000466538 MROQ9BYG7 248 aa1.96□□□□□ -2.1
CDC42BPA-211ENST00000466538 MAP1LC3AQ9H492 121 aa1.96□□□□□ -2.1
CDC42BPA-211ENST00000466538 FGFR1OP2Q9NVK5 253 aa1.96□□□□□ -2.1
CDC42BPA-211ENST00000466538 SHANK3Q9BYB0 1731 aa1.96□□□□□ -2.1
CDC42BPA-211ENST00000466538 NAV1Q8NEY1 1877 aa1.96□□□□□ -2.1
CDC42BPA-211ENST00000466538 EVC2Q86UK5 1308 aa1.95□□□□□ -2.1
CDC42BPA-211ENST00000466538 TEX50A0A1B0GTY4 177 aa1.95□□□□□ -2.1
CDC42BPA-211ENST00000466538 C3orf84H3BNL1 204 aa1.95□□□□□ -2.1
CDC42BPA-211ENST00000466538 ATP5G1P05496 136 aa1.95□□□□□ -2.1
CDC42BPA-211ENST00000466538 CBR1P16152 277 aa1.95□□□□□ -2.1
CDC42BPA-211ENST00000466538 GZMHP20718 246 aa1.95□□□□□ -2.1
CDC42BPA-211ENST00000466538 NPPCP23582 126 aa1.95□□□□□ -2.1
CDC42BPA-211ENST00000466538 G0S2P27469 103 aa1.95□□□□□ -2.1
CDC42BPA-211ENST00000466538 PPP1CCP36873 323 aaKnown RBP1.95□□□□□ -2.1
CDC42BPA-211ENST00000466538 AP2S1P53680 142 aaPredicted RBP1.95□□□□□ -2.1
CDC42BPA-211ENST00000466538 LINC00313P59037 77 aa1.95□□□□□ -2.1
CDC42BPA-211ENST00000466538 SRSF6Q13247 344 aaKnown RBP1.95□□□□□ -2.1
CDC42BPA-211ENST00000466538 TAF1AQ15573 450 aaPredicted RBP1.95□□□□□ -2.1
CDC42BPA-211ENST00000466538 LRRC75BQ2VPJ9 315 aa1.95□□□□□ -2.1
CDC42BPA-211ENST00000466538 MESTQ5EB52 335 aa1.95□□□□□ -2.1
CDC42BPA-211ENST00000466538 ZNF767PQ75MW2 155 aa1.95□□□□□ -2.1
CDC42BPA-211ENST00000466538 STX12Q86Y82 276 aa1.95□□□□□ -2.1
CDC42BPA-211ENST00000466538 OR11H1Q8NG94 326 aa1.95□□□□□ -2.1
CDC42BPA-211ENST00000466538 OR10A6Q8NH74 314 aa1.95□□□□□ -2.1
CDC42BPA-211ENST00000466538 OR10D3Q8NH80 312 aa1.95□□□□□ -2.1
CDC42BPA-211ENST00000466538 ERMNQ8TAM6 284 aa1.95□□□□□ -2.1
CDC42BPA-211ENST00000466538 DGCR14Q96DF8 476 aaKnown RBP1.95□□□□□ -2.1
CDC42BPA-211ENST00000466538 PRRT1Q99946 306 aa1.95□□□□□ -2.1
CDC42BPA-211ENST00000466538 TIPINQ9BVW5 301 aa1.95□□□□□ -2.1
CDC42BPA-211ENST00000466538 C11orf1Q9H5F2 150 aa1.95□□□□□ -2.1
CDC42BPA-211ENST00000466538 FAM206AQ9NX38 181 aa1.95□□□□□ -2.1
CDC42BPA-211ENST00000466538 PSORS1C2Q9UIG4 136 aa1.95□□□□□ -2.1
CDC42BPA-211ENST00000466538 PBRM1Q86U86 1689 aa1.95□□□□□ -2.1
CDC42BPA-211ENST00000466538 DHX57Q6P158 1386 aaKnown RBP1.95□□□□□ -2.1
CDC42BPA-211ENST00000466538 KMT2EQ8IZD2 1858 aa1.94□□□□□ -2.1
CDC42BPA-211ENST00000466538 LTBP2Q14767 1821 aa1.94□□□□□ -2.1
CDC42BPA-211ENST00000466538 TRAV8-1A0A0A6YYK1 113 aa1.94□□□□□ -2.1
CDC42BPA-211ENST00000466538 GRIFINA4D1Z8 144 aa1.94□□□□□ -2.1
CDC42BPA-211ENST00000466538 SMIM9A6NGZ8 99 aa1.94□□□□□ -2.1
CDC42BPA-211ENST00000466538 KCNK1O00180 336 aa1.94□□□□□ -2.1
CDC42BPA-211ENST00000466538 PFDN6O15212 129 aa1.94□□□□□ -2.1
CDC42BPA-211ENST00000466538 APOEP02649 317 aa1.94□□□□□ -2.1
CDC42BPA-211ENST00000466538 CPMP14384 443 aa1.94□□□□□ -2.1
CDC42BPA-211ENST00000466538 SLC25A16P16260 332 aa1.94□□□□□ -2.1
CDC42BPA-211ENST00000466538 RPL12P30050 165 aaKnown RBP1.94□□□□□ -2.1
CDC42BPA-211ENST00000466538 LPAR6P43657 344 aa1.94□□□□□ -2.1
CDC42BPA-211ENST00000466538 SNAP25P60880 206 aa1.94□□□□□ -2.1
CDC42BPA-211ENST00000466538 BTN3A2P78410 334 aa1.94□□□□□ -2.1
CDC42BPA-211ENST00000466538 SNCBQ16143 134 aa1.94□□□□□ -2.1
CDC42BPA-211ENST00000466538 CST9Q5W186 159 aa1.94□□□□□ -2.1
CDC42BPA-211ENST00000466538 LPCAT4Q643R3 524 aa1.94□□□□□ -2.1
CDC42BPA-211ENST00000466538 SPOPLQ6IQ16 392 aa1.94□□□□□ -2.1
CDC42BPA-211ENST00000466538 CCDC121Q6ZUS5 278 aa1.94□□□□□ -2.1
CDC42BPA-211ENST00000466538 ATP5L2Q7Z4Y8 100 aa1.94□□□□□ -2.1
CDC42BPA-211ENST00000466538 S100A7AQ86SG5 101 aa1.94□□□□□ -2.1
CDC42BPA-211ENST00000466538 LYG2Q86SG7 212 aa1.94□□□□□ -2.1
CDC42BPA-211ENST00000466538 KRTAP13-1Q8IUC0 172 aa1.94□□□□□ -2.1
CDC42BPA-211ENST00000466538 TRAPPC5Q8IUR0 188 aa1.94□□□□□ -2.1
CDC42BPA-211ENST00000466538 GID4Q8IVV7 300 aa1.94□□□□□ -2.1
CDC42BPA-211ENST00000466538 TMEM86BQ8N661 226 aa1.94□□□□□ -2.1
CDC42BPA-211ENST00000466538 TMEM161BQ8NDZ6 487 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms