RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 SNX5Q9Y5X3 404 aa4.19□□□□□ -1.74
NCL-208ENST00000466274 V9GYY5 206 aaPredicted RBP4.19□□□□□ -1.74
NCL-208ENST00000466274 IGHV3-43A0A0B4J1X8 118 aa4.18□□□□□ -1.74
NCL-208ENST00000466274 A0A1B0GTI1 187 aa4.18□□□□□ -1.74
NCL-208ENST00000466274 OR4C46A6NHA9 309 aa4.18□□□□□ -1.74
NCL-208ENST00000466274 C15orf65H3BRN8 121 aa4.18□□□□□ -1.74
NCL-208ENST00000466274 ARPC2O15144 300 aa4.18□□□□□ -1.74
NCL-208ENST00000466274 SLC31A2O15432 143 aa4.18□□□□□ -1.74
NCL-208ENST00000466274 CA1P00915 261 aaPredicted RBP4.18□□□□□ -1.74
NCL-208ENST00000466274 GSTT2P0CG29 244 aa4.18□□□□□ -1.74
NCL-208ENST00000466274 GSTT2BP0CG30 244 aa4.18□□□□□ -1.74
NCL-208ENST00000466274 IGHV3-43DP0DP04 118 aa4.18□□□□□ -1.74
NCL-208ENST00000466274 TMEM225BP0DP42 221 aa4.18□□□□□ -1.74
NCL-208ENST00000466274 CCL1P22362 96 aa4.18□□□□□ -1.74
NCL-208ENST00000466274 RRM2P31350 389 aa4.18□□□□□ -1.74
NCL-208ENST00000466274 EXOSC2Q13868 293 aaKnown RBP4.18□□□□□ -1.74
NCL-208ENST00000466274 COQ5Q5HYK3 327 aa4.18□□□□□ -1.74
NCL-208ENST00000466274 SLC35D3Q5M8T2 416 aa4.18□□□□□ -1.74
NCL-208ENST00000466274 ZNF691Q5VV52 312 aa4.18□□□□□ -1.74
NCL-208ENST00000466274 BTNL8Q6UX41 500 aa4.18□□□□□ -1.74
NCL-208ENST00000466274 RASSF6Q6ZTQ3 369 aa4.18□□□□□ -1.74
NCL-208ENST00000466274 SERPINA12Q8IW75 414 aa4.18□□□□□ -1.74
NCL-208ENST00000466274 STX19Q8N4C7 294 aa4.18□□□□□ -1.74
NCL-208ENST00000466274 CD300LFQ8TDQ1 290 aa4.18□□□□□ -1.74
NCL-208ENST00000466274 FAM162AQ96A26 154 aa4.18□□□□□ -1.74
NCL-208ENST00000466274 TSNAXQ99598 290 aaKnown RBP4.18□□□□□ -1.74
NCL-208ENST00000466274 C5orf66Q9H5L9 145 aa4.18□□□□□ -1.74
NCL-208ENST00000466274 MRGBPQ9NV56 204 aa4.18□□□□□ -1.74
NCL-208ENST00000466274 TAS2R1Q9NYW7 299 aa4.18□□□□□ -1.74
NCL-208ENST00000466274 RCC2Q9P258 522 aaKnown RBP4.18□□□□□ -1.74
NCL-208ENST00000466274 MLXQ9UH92 298 aa4.18□□□□□ -1.74
NCL-208ENST00000466274 R4GMQ9 66 aa4.18□□□□□ -1.74
NCL-208ENST00000466274 FLG2Q5D862 2391 aaPredicted RBP4.17□□□□□ -1.74
NCL-208ENST00000466274 TRAV39A0A0B4J263 110 aa4.17□□□□□ -1.74
NCL-208ENST00000466274 TRAV24A0A0B4J272 114 aa4.17□□□□□ -1.74
NCL-208ENST00000466274 NBDYA0A0U1RRE5 68 aa4.17□□□□□ -1.74
NCL-208ENST00000466274 OR5H14A6NHG9 310 aa4.17□□□□□ -1.74
NCL-208ENST00000466274 BBIP1A8MTZ0 92 aa4.17□□□□□ -1.74
NCL-208ENST00000466274 H7C2Y5 167 aa4.17□□□□□ -1.74
NCL-208ENST00000466274 TSPAN4O14817 238 aa4.17□□□□□ -1.74
NCL-208ENST00000466274 SULT1B1O43704 296 aa4.17□□□□□ -1.74
NCL-208ENST00000466274 MRPS14O60783 128 aaKnown RBP4.17□□□□□ -1.74
NCL-208ENST00000466274 OR2C1O95371 312 aa4.17□□□□□ -1.74
NCL-208ENST00000466274 FADS2O95864 444 aaKnown RBP4.17□□□□□ -1.74
NCL-208ENST00000466274 IFNA5P01569 189 aa4.17□□□□□ -1.74
NCL-208ENST00000466274 SEMG1P04279 462 aa4.17□□□□□ -1.74
NCL-208ENST00000466274 MYOD1P15172 320 aa4.17□□□□□ -1.74
NCL-208ENST00000466274 XGP55808 180 aa4.17□□□□□ -1.74
NCL-208ENST00000466274 MAGOHP61326 146 aaKnown RBP4.17□□□□□ -1.74
NCL-208ENST00000466274 RHOGP84095 191 aa4.17□□□□□ -1.74
NCL-208ENST00000466274 MED21Q13503 144 aa4.17□□□□□ -1.74
NCL-208ENST00000466274 IL13RA2Q14627 380 aa4.17□□□□□ -1.74
NCL-208ENST00000466274 CDK5R1Q15078 307 aa4.17□□□□□ -1.74
NCL-208ENST00000466274 TMEM41BQ5BJD5 291 aa4.17□□□□□ -1.74
NCL-208ENST00000466274 SLC25A30Q5SVS4 291 aa4.17□□□□□ -1.74
NCL-208ENST00000466274 C6orf183Q5T699 404 aa4.17□□□□□ -1.74
NCL-208ENST00000466274 FAM71F2Q6NXP2 309 aa4.17□□□□□ -1.74
NCL-208ENST00000466274 WDR93Q6P2C0 686 aa4.17□□□□□ -1.74
NCL-208ENST00000466274 TRAT1Q6PIZ9 186 aa4.17□□□□□ -1.74
NCL-208ENST00000466274 ZNF767PQ75MW2 155 aa4.17□□□□□ -1.74
NCL-208ENST00000466274 ARPINQ7Z6K5 226 aa4.17□□□□□ -1.74
NCL-208ENST00000466274 CCDC28AQ8IWP9 274 aa4.17□□□□□ -1.74
NCL-208ENST00000466274 C15orf53Q8NAA6 179 aa4.17□□□□□ -1.74
NCL-208ENST00000466274 Q8NAQ8 132 aa4.17□□□□□ -1.74
NCL-208ENST00000466274 ZNF439Q8NDP4 499 aa4.17□□□□□ -1.74
NCL-208ENST00000466274 OR10V1Q8NGI7 309 aa4.17□□□□□ -1.74
NCL-208ENST00000466274 KCNG3Q8TAE7 436 aa4.17□□□□□ -1.74
NCL-208ENST00000466274 CACNG8Q8WXS5 425 aa4.17□□□□□ -1.74
NCL-208ENST00000466274 MCUR1Q96AQ8 359 aa4.17□□□□□ -1.74
NCL-208ENST00000466274 OPALINQ96PE5 141 aa4.17□□□□□ -1.74
NCL-208ENST00000466274 NR1H4Q96RI1 486 aaPredicted RBP4.17□□□□□ -1.74
NCL-208ENST00000466274 PHB2Q99623 299 aa4.17□□□□□ -1.74
NCL-208ENST00000466274 ATG101Q9BSB4 218 aa4.17□□□□□ -1.74
NCL-208ENST00000466274 ABHD14AQ9BUJ0 271 aa4.17□□□□□ -1.74
NCL-208ENST00000466274 MED20Q9H944 212 aa4.17□□□□□ -1.74
NCL-208ENST00000466274 NKIRAS1Q9NYS0 192 aa4.17□□□□□ -1.74
NCL-208ENST00000466274 MRPL27Q9P0M9 148 aaKnown RBP4.17□□□□□ -1.74
NCL-208ENST00000466274 SAMD4AQ9UPU9 718 aaKnown RBP4.17□□□□□ -1.74
NCL-208ENST00000466274 EXOSC1Q9Y3B2 195 aaKnown RBP4.17□□□□□ -1.74
NCL-208ENST00000466274 V9GYQ6 96 aa4.17□□□□□ -1.74
NCL-208ENST00000466274 IGHV4-28A0A0C4DH34 117 aa4.16□□□□□ -1.74
NCL-208ENST00000466274 IGKV1-12A0A0C4DH73 117 aa4.16□□□□□ -1.74
NCL-208ENST00000466274 TMEM213A2RRL7 107 aa4.16□□□□□ -1.74
NCL-208ENST00000466274 IFITM10A6NMD0 228 aa4.16□□□□□ -1.74
NCL-208ENST00000466274 A8MWP6 167 aa4.16□□□□□ -1.74
NCL-208ENST00000466274 NME4O00746 187 aa4.16□□□□□ -1.74
NCL-208ENST00000466274 MRASO14807 208 aa4.16□□□□□ -1.74
NCL-208ENST00000466274 GMNNO75496 209 aa4.16□□□□□ -1.74
NCL-208ENST00000466274 KRT36O76013 467 aa4.16□□□□□ -1.74
NCL-208ENST00000466274 IGKV1D-12P01611 117 aa4.16□□□□□ -1.74
NCL-208ENST00000466274 ATF1P18846 271 aa4.16□□□□□ -1.74
NCL-208ENST00000466274 LIPEQ05469 1076 aa4.16□□□□□ -1.74
NCL-208ENST00000466274 PSG5Q15238 335 aa4.16□□□□□ -1.74
NCL-208ENST00000466274 C12orf74Q32Q52 190 aa4.16□□□□□ -1.74
NCL-208ENST00000466274 C8orf82Q6P1X6 216 aaPredicted RBP4.16□□□□□ -1.74
NCL-208ENST00000466274 ZNF833PQ6ZTB9 187 aa4.16□□□□□ -1.74
NCL-208ENST00000466274 UTS2BQ765I0 119 aa4.16□□□□□ -1.74
NCL-208ENST00000466274 TMEM179BQ7Z7N9 219 aa4.16□□□□□ -1.74
NCL-208ENST00000466274 NECAP1Q8NC96 275 aa4.16□□□□□ -1.74
NCL-208ENST00000466274 OR1L1Q8NH94 360 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms