RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 ZNF585BQ52M93 769 aa3.78□□□□□ -1.8
EXOSC3-204ENST00000465860 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.78□□□□□ -1.8
EXOSC3-204ENST00000465860 C18orf65Q6ZTR6 163 aa3.78□□□□□ -1.8
EXOSC3-204ENST00000465860 LINC00311Q8N616 119 aa3.78□□□□□ -1.8
EXOSC3-204ENST00000465860 Q8N6K4 173 aa3.78□□□□□ -1.8
EXOSC3-204ENST00000465860 OR10A7Q8NGE5 316 aa3.78□□□□□ -1.8
EXOSC3-204ENST00000465860 OR52M1Q8NGK5 317 aa3.78□□□□□ -1.8
EXOSC3-204ENST00000465860 OR4C13Q8NGP0 309 aa3.78□□□□□ -1.8
EXOSC3-204ENST00000465860 OR5H6Q8NGV6 325 aa3.78□□□□□ -1.8
EXOSC3-204ENST00000465860 SGMS2Q8NHU3 365 aa3.78□□□□□ -1.8
EXOSC3-204ENST00000465860 CAPSLQ8WWF8 208 aa3.78□□□□□ -1.8
EXOSC3-204ENST00000465860 RTN4IP1Q8WWV3 396 aaPredicted RBP3.78□□□□□ -1.8
EXOSC3-204ENST00000465860 FCGR1BQ92637 280 aa3.78□□□□□ -1.8
EXOSC3-204ENST00000465860 TOMM40LQ969M1 308 aa3.78□□□□□ -1.8
EXOSC3-204ENST00000465860 TRIM63Q969Q1 353 aa3.78□□□□□ -1.8
EXOSC3-204ENST00000465860 NOL4LQ96MY1 436 aaPredicted RBP3.78□□□□□ -1.8
EXOSC3-204ENST00000465860 RBM14Q96PK6 669 aaKnown RBP3.78□□□□□ -1.8
EXOSC3-204ENST00000465860 CHCHD6Q9BRQ6 235 aa3.78□□□□□ -1.8
EXOSC3-204ENST00000465860 CENPOQ9BU64 300 aa3.78□□□□□ -1.8
EXOSC3-204ENST00000465860 CST11Q9H112 138 aa3.78□□□□□ -1.8
EXOSC3-204ENST00000465860 SPACA1Q9HBV2 294 aa3.78□□□□□ -1.8
EXOSC3-204ENST00000465860 ABCB10Q9NRK6 738 aa3.78□□□□□ -1.8
EXOSC3-204ENST00000465860 PLSCR3Q9NRY6 295 aa3.78□□□□□ -1.8
EXOSC3-204ENST00000465860 OR1A1Q9P1Q5 309 aa3.78□□□□□ -1.8
EXOSC3-204ENST00000465860 GHRLQ9UBU3 117 aa3.78□□□□□ -1.8
EXOSC3-204ENST00000465860 ZNF230Q9UIE0 474 aaPredicted RBP3.78□□□□□ -1.8
EXOSC3-204ENST00000465860 LINC00527Q9UJ94 153 aa3.78□□□□□ -1.8
EXOSC3-204ENST00000465860 A0A075B6Q4 140 aa3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 SAA2-SAA4A0A096LPE2 208 aa3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 TRBV6-6A0A0A6YYG2 114 aa3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 SPINT2O43291 252 aa3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 IGKV1D-33P01593 117 aa3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 IGKV1-33P01594 117 aa3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 GLAP06280 429 aa3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 SCTP09683 121 aa3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 SAA2P0DJI9 122 aaPredicted RBP3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 PTHLHP12272 177 aa3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 GNB3P16520 340 aa3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 RAB3BP20337 219 aa3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 SDC2P34741 201 aa3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 CEACAM3P40198 252 aa3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 ZNF137PP52743 207 aa3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 MXD1Q05195 221 aa3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 MADCAM1Q13477 382 aa3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 EBI3Q14213 229 aa3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 RPL39P5Q59GN2 51 aa3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 IGSF11Q5DX21 431 aa3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 C6orf183Q5T699 404 aa3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 C11orf88Q6PI97 169 aa3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 GLDNQ6ZMI3 551 aaPredicted RBP3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 Q6ZTK2 550 aa3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 OR2W3Q7Z3T1 314 aa3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 MOB3BQ86TA1 216 aa3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 C5orf56Q8N8D9 126 aa3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 C8orf31Q8N9H6 132 aa3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 OR10R2Q8NGX6 335 aa3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 OR10X1Q8NGY0 326 aa3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 OR2T6Q8NHC8 308 aa3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 FAM110DQ8TAY7 271 aaPredicted RBP3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 SETD6Q8TBK2 473 aa3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 IL1F10Q8WWZ1 152 aa3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 RPEQ96AT9 228 aa3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 SLC25A38Q96DW6 304 aa3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 YIPF6Q96EC8 236 aa3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 C5orf30Q96GV9 206 aa3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 ABHD14BQ96IU4 210 aa3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 ZNF479Q96JC4 524 aa3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 NEDD4LQ96PU5 975 aa3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 CITED2Q99967 270 aaPredicted RBP3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 HSPB9Q9BQS6 159 aa3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 ZNF251Q9BRH9 671 aa3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 AGMATQ9BSE5 352 aa3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 MRPL20Q9BYC9 149 aaKnown RBP3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 NPFFR1Q9GZQ6 430 aa3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 IFI27L2Q9H2X8 130 aa3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 RANBP3Q9H6Z4 567 aaPredicted RBP3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 Q9N2K0 584 aa3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 HEYLQ9NQ87 328 aaPredicted RBP3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 OR2S2Q9NQN1 319 aa3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 PCDHB16Q9NRJ7 776 aa3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 PLEKHJ1Q9NW61 149 aa3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 GNG12Q9UBI6 72 aa3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 PITPNC1Q9UKF7 332 aa3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 HSF4Q9ULV5 492 aa3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 STUB1Q9UNE7 303 aa3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 DNAH9Q9NYC9 4486 aa3.77□□□□□ -1.81
EXOSC3-204ENST00000465860 TNCP24821 2201 aa3.76□□□□□ -1.81
EXOSC3-204ENST00000465860 COL7A1Q02388 2944 aa3.76□□□□□ -1.81
EXOSC3-204ENST00000465860 A0A087WXM4 84 aa3.76□□□□□ -1.81
EXOSC3-204ENST00000465860 LOC100506127A0A0U1RQW1 187 aa3.76□□□□□ -1.81
EXOSC3-204ENST00000465860 TRIM64CA6NLI5 447 aa3.76□□□□□ -1.81
EXOSC3-204ENST00000465860 OOSP1A8MZH6 123 aa3.76□□□□□ -1.81
EXOSC3-204ENST00000465860 MFNGO00587 321 aa3.76□□□□□ -1.81
EXOSC3-204ENST00000465860 SSX5O60225 188 aa3.76□□□□□ -1.81
EXOSC3-204ENST00000465860 YPEL1O60688 119 aa3.76□□□□□ -1.81
EXOSC3-204ENST00000465860 CA11O75493 328 aa3.76□□□□□ -1.81
EXOSC3-204ENST00000465860 GAPDHP04406 335 aaKnown RBP3.76□□□□□ -1.81
EXOSC3-204ENST00000465860 FCGR3AP08637 254 aa3.76□□□□□ -1.81
EXOSC3-204ENST00000465860 GSTT2P0CG29 244 aa3.76□□□□□ -1.81
EXOSC3-204ENST00000465860 GSTT2BP0CG30 244 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms