RNA–Protein interactions for RNA: ENST00000464221.1

DDX43-202, Transcript of DEAD-box helicase 43, humanhuman

TSL 4

Gene DDX43, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43-202ENST00000464221 RAB25P57735 213 aa13.25□□□□□ -0.29
DDX43-202ENST00000464221 GNG2P59768 71 aa13.25□□□□□ -0.29
DDX43-202ENST00000464221 CX3CL1P78423 397 aa13.25□□□□□ -0.29
DDX43-202ENST00000464221 PSG5Q15238 335 aa13.25□□□□□ -0.29
DDX43-202ENST00000464221 SRSF7Q16629 238 aaKnown RBP eCLIP13.25□□□□□ -0.29
DDX43-202ENST00000464221 ZNF260Q3ZCT1 412 aa13.25□□□□□ -0.29
DDX43-202ENST00000464221 PDPNQ86YL7 162 aa13.25□□□□□ -0.29
DDX43-202ENST00000464221 MYOZ3Q8TDC0 251 aa13.25□□□□□ -0.29
DDX43-202ENST00000464221 ABHD5Q8WTS1 349 aa13.25□□□□□ -0.29
DDX43-202ENST00000464221 YIPF6Q96EC8 236 aa13.25□□□□□ -0.29
DDX43-202ENST00000464221 CLCC1Q96S66 551 aa13.25□□□□□ -0.29
DDX43-202ENST00000464221 KLK15Q9H2R5 256 aa13.25□□□□□ -0.29
DDX43-202ENST00000464221 VCX3AQ9NNX9 186 aa13.25□□□□□ -0.29
DDX43-202ENST00000464221 SLC35D1Q9NTN3 355 aa13.25□□□□□ -0.29
DDX43-202ENST00000464221 AURKAIP1Q9NWT8 199 aaPredicted RBP13.25□□□□□ -0.29
DDX43-202ENST00000464221 CCL24O00175 119 aa13.24□□□□□ -0.29
DDX43-202ENST00000464221 SLC25A17O43808 307 aa13.24□□□□□ -0.29
DDX43-202ENST00000464221 AIREO43918 545 aa13.24□□□□□ -0.29
DDX43-202ENST00000464221 IGLV1-40P01703 118 aa13.24□□□□□ -0.29
DDX43-202ENST00000464221 MYCNOSP40205 109 aa13.24□□□□□ -0.29
DDX43-202ENST00000464221 CDX1P47902 265 aaPredicted RBP13.24□□□□□ -0.29
DDX43-202ENST00000464221 SCAND1P57086 179 aa13.24□□□□□ -0.29
DDX43-202ENST00000464221 LSM3P62310 102 aaKnown RBP13.24□□□□□ -0.29
DDX43-202ENST00000464221 TIMM50Q3ZCQ8 353 aa13.24□□□□□ -0.29
DDX43-202ENST00000464221 C19orf54Q5BKX5 351 aa13.24□□□□□ -0.29
DDX43-202ENST00000464221 FAM103A1Q9BTL3 118 aaKnown RBP13.24□□□□□ -0.29
DDX43-202ENST00000464221 RBM7Q9Y580 266 aaKnown RBP13.24□□□□□ -0.29
DDX43-202ENST00000464221 TRAV18A0A075B6X5 111 aa13.23□□□□□ -0.29
DDX43-202ENST00000464221 J3QRK9 145 aa13.23□□□□□ -0.29
DDX43-202ENST00000464221 SOX15O60248 233 aa13.23□□□□□ -0.29
DDX43-202ENST00000464221 SPDEFO95238 335 aa13.23□□□□□ -0.29
DDX43-202ENST00000464221 CA2P00918 260 aa13.23□□□□□ -0.29
DDX43-202ENST00000464221 NFYAP23511 347 aaPredicted RBP13.23□□□□□ -0.29
DDX43-202ENST00000464221 HOXD3P31249 432 aaPredicted RBP13.23□□□□□ -0.29
DDX43-202ENST00000464221 RPS16P62249 146 aaKnown RBP13.23□□□□□ -0.29
DDX43-202ENST00000464221 PITPNAQ00169 270 aa13.23□□□□□ -0.29
DDX43-202ENST00000464221 ZNF660Q6AZW8 331 aaPredicted RBP13.23□□□□□ -0.29
DDX43-202ENST00000464221 REC114Q7Z4M0 266 aa13.23□□□□□ -0.29
DDX43-202ENST00000464221 CASTOR1Q8WTX7 329 aa13.23□□□□□ -0.29
DDX43-202ENST00000464221 C4orf3Q8WVX3 66 aa13.23□□□□□ -0.29
DDX43-202ENST00000464221 TSNAXQ99598 290 aaKnown RBP13.23□□□□□ -0.29
DDX43-202ENST00000464221 RNF5Q99942 180 aa13.23□□□□□ -0.29
DDX43-202ENST00000464221 GNB4Q9HAV0 340 aa13.23□□□□□ -0.29
DDX43-202ENST00000464221 A0A1W2PN81 502 aa13.22□□□□□ -0.29
DDX43-202ENST00000464221 DUS4LO95620 317 aaKnown RBP13.22□□□□□ -0.29
DDX43-202ENST00000464221 EGR2P11161 476 aaPredicted RBP13.22□□□□□ -0.29
DDX43-202ENST00000464221 CHRNA7P36544 502 aa13.22□□□□□ -0.29
DDX43-202ENST00000464221 CRIP2P52943 208 aaPredicted RBP13.22□□□□□ -0.29
DDX43-202ENST00000464221 TMEM65Q6PI78 240 aa13.22□□□□□ -0.29
DDX43-202ENST00000464221 MINDY2Q8NBR6 621 aa13.22□□□□□ -0.29
DDX43-202ENST00000464221 BVESQ8NE79 360 aa13.22□□□□□ -0.29
DDX43-202ENST00000464221 FLYWCH2Q96CP2 140 aaKnown RBP13.22□□□□□ -0.29
DDX43-202ENST00000464221 HARBI1Q96MB7 349 aa13.22□□□□□ -0.29
DDX43-202ENST00000464221 OR5B12Q96R08 314 aa13.22□□□□□ -0.29
DDX43-202ENST00000464221 DCSTAMPQ9H295 470 aa13.22□□□□□ -0.29
DDX43-202ENST00000464221 FOXA2Q9Y261 457 aaPredicted RBP13.22□□□□□ -0.29
DDX43-202ENST00000464221 COL7A1Q02388 2944 aa13.21□□□□□ -0.29
DDX43-202ENST00000464221 LINC00473A8K010 186 aa13.21□□□□□ -0.29
DDX43-202ENST00000464221 IGLV2-23P01705 113 aa13.21□□□□□ -0.29
DDX43-202ENST00000464221 PTHLHP12272 177 aa13.21□□□□□ -0.29
DDX43-202ENST00000464221 RPS19P39019 145 aaKnown RBP13.21□□□□□ -0.29
DDX43-202ENST00000464221 KRTAP10-11P60412 298 aa13.21□□□□□ -0.29
DDX43-202ENST00000464221 SSBP2P81877 361 aaPredicted RBP13.21□□□□□ -0.29
DDX43-202ENST00000464221 KIAA0141Q14154 515 aaPredicted RBP13.21□□□□□ -0.29
DDX43-202ENST00000464221 GRPEL2Q8TAA5 225 aa13.21□□□□□ -0.29
DDX43-202ENST00000464221 MRAPQ8TCY5 172 aa13.21□□□□□ -0.29
DDX43-202ENST00000464221 DDB2Q92466 427 aa13.21□□□□□ -0.29
DDX43-202ENST00000464221 ANXA10Q9UJ72 324 aa13.21□□□□□ -0.29
DDX43-202ENST00000464221 SPATA2Q9UM82 520 aa13.21□□□□□ -0.29
DDX43-202ENST00000464221 SORL1Q92673 2214 aa13.2□□□□□ -0.3
DDX43-202ENST00000464221 IGKV1D-13A0A0B4J2D9 117 aa13.2□□□□□ -0.3
DDX43-202ENST00000464221 TRIM64CA6NLI5 447 aa13.2□□□□□ -0.3
DDX43-202ENST00000464221 FCER2P06734 321 aa13.2□□□□□ -0.3
DDX43-202ENST00000464221 IGKV1-13P0DP09 117 aa13.2□□□□□ -0.3
DDX43-202ENST00000464221 DUTP33316 252 aaKnown RBP13.2□□□□□ -0.3
DDX43-202ENST00000464221 PJVKQ0ZLH3 352 aa13.2□□□□□ -0.3
DDX43-202ENST00000464221 FHL3Q13643 280 aa13.2□□□□□ -0.3
DDX43-202ENST00000464221 RTL8BQ17RB0 113 aa13.2□□□□□ -0.3
DDX43-202ENST00000464221 CNIH2Q6PI25 160 aa13.2□□□□□ -0.3
DDX43-202ENST00000464221 PPP1R27Q86WC6 154 aa13.2□□□□□ -0.3
DDX43-202ENST00000464221 GVQW1Q8N7I0 195 aa13.2□□□□□ -0.3
DDX43-202ENST00000464221 ZNF491Q8N8L2 437 aa13.2□□□□□ -0.3
DDX43-202ENST00000464221 ARPC1AQ92747 370 aa13.2□□□□□ -0.3
DDX43-202ENST00000464221 UBE2E2Q96LR5 201 aa13.2□□□□□ -0.3
DDX43-202ENST00000464221 OR2W1Q9Y3N9 320 aa13.2□□□□□ -0.3
DDX43-202ENST00000464221 NUBP2Q9Y5Y2 271 aa13.2□□□□□ -0.3
DDX43-202ENST00000464221 A0A0A6YYH2 397 aa13.19□□□□□ -0.3
DDX43-202ENST00000464221 A6NJ64 397 aa13.19□□□□□ -0.3
DDX43-202ENST00000464221 ARPC1BO15143 372 aaKnown RBP13.19□□□□□ -0.3
DDX43-202ENST00000464221 CTXN2P0C2S0 81 aa13.19□□□□□ -0.3
DDX43-202ENST00000464221 RAB9AP51151 201 aa13.19□□□□□ -0.3
DDX43-202ENST00000464221 LUMP51884 338 aaPredicted RBP13.19□□□□□ -0.3
DDX43-202ENST00000464221 GNB1P62873 340 aa13.19□□□□□ -0.3
DDX43-202ENST00000464221 CBX3Q13185 183 aa13.19□□□□□ -0.3
DDX43-202ENST00000464221 TMEM177Q53S58 311 aa13.19□□□□□ -0.3
DDX43-202ENST00000464221 ACTBL2Q562R1 376 aa13.19□□□□□ -0.3
DDX43-202ENST00000464221 ASPHD1Q5U4P2 390 aa13.19□□□□□ -0.3
DDX43-202ENST00000464221 UNQ5815/PRO19632Q6UWF5 114 aa13.19□□□□□ -0.3
DDX43-202ENST00000464221 ZNF562Q6V9R5 426 aa13.19□□□□□ -0.3
DDX43-202ENST00000464221 ZNF645Q8N7E2 425 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms