RNA–Protein interactions for RNA: ENST00000463705.5

CHRNA4-202, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 5,201 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-202ENST00000463705 ELOBQ15370 118 aa11.5□□□□□ -0.57
CHRNA4-202ENST00000463705 C1QTNF5Q9BXJ0 243 aa11.5□□□□□ -0.57
CHRNA4-202ENST00000463705 PPIAL4CA0A0B4J2A2 164 aa11.5□□□□□ -0.57
CHRNA4-202ENST00000463705 ZNF253O75346 499 aa11.5□□□□□ -0.57
CHRNA4-202ENST00000463705 PPIAL4GP0DN37 164 aa11.5□□□□□ -0.57
CHRNA4-202ENST00000463705 TNFRSF9Q07011 255 aa11.5□□□□□ -0.57
CHRNA4-202ENST00000463705 RGP1Q92546 391 aaPredicted RBP11.5□□□□□ -0.57
CHRNA4-202ENST00000463705 TAF15Q92804 592 aaKnown RBP eCLIP11.5□□□□□ -0.57
CHRNA4-202ENST00000463705 GSX1Q9H4S2 264 aaPredicted RBP11.5□□□□□ -0.57
CHRNA4-202ENST00000463705 A0A1W2PS18 150 aa11.49□□□□□ -0.57
CHRNA4-202ENST00000463705 OR2A4O95047 310 aa11.49□□□□□ -0.57
CHRNA4-202ENST00000463705 NMBP08949 121 aa11.49□□□□□ -0.57
CHRNA4-202ENST00000463705 ZNF660Q6AZW8 331 aaPredicted RBP11.49□□□□□ -0.57
CHRNA4-202ENST00000463705 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.49□□□□□ -0.57
CHRNA4-202ENST00000463705 ISOC2Q96AB3 205 aa11.49□□□□□ -0.57
CHRNA4-202ENST00000463705 OR2A7Q96R45 310 aa11.49□□□□□ -0.57
CHRNA4-202ENST00000463705 NRIP2Q9BQI9 281 aa11.49□□□□□ -0.57
CHRNA4-202ENST00000463705 SPTA1P02549 2419 aa11.49□□□□□ -0.57
CHRNA4-202ENST00000463705 RD3LP0DJH9 198 aa11.49□□□□□ -0.57
CHRNA4-202ENST00000463705 VAMP3Q15836 100 aa11.49□□□□□ -0.57
CHRNA4-202ENST00000463705 ABLIM2Q6H8Q1 611 aa11.49□□□□□ -0.57
CHRNA4-202ENST00000463705 LRP11Q86VZ4 500 aa11.49□□□□□ -0.57
CHRNA4-202ENST00000463705 OR4A5Q8NH83 315 aa11.49□□□□□ -0.57
CHRNA4-202ENST00000463705 C19orf24Q9BVV8 132 aa11.49□□□□□ -0.57
CHRNA4-202ENST00000463705 UMODP07911 640 aa11.49□□□□□ -0.57
CHRNA4-202ENST00000463705 WNT5AP41221 380 aa11.49□□□□□ -0.57
CHRNA4-202ENST00000463705 TCL1AP56279 114 aa11.49□□□□□ -0.57
CHRNA4-202ENST00000463705 PQLC2Q6ZP29 291 aa11.49□□□□□ -0.57
CHRNA4-202ENST00000463705 ZNF146Q15072 292 aa11.49□□□□□ -0.57
CHRNA4-202ENST00000463705 LRRC75BQ2VPJ9 315 aa11.49□□□□□ -0.57
CHRNA4-202ENST00000463705 FAM90A1Q86YD7 464 aa11.49□□□□□ -0.57
CHRNA4-202ENST00000463705 CLEC7AQ9BXN2 247 aa11.49□□□□□ -0.57
CHRNA4-202ENST00000463705 A0A0G2JK05 382 aa11.48□□□□□ -0.57
CHRNA4-202ENST00000463705 MARCH11A6NNE9 402 aa11.48□□□□□ -0.57
CHRNA4-202ENST00000463705 APCSP02743 223 aa11.48□□□□□ -0.57
CHRNA4-202ENST00000463705 APOBEC3AP31941 199 aaPredicted RBP11.48□□□□□ -0.57
CHRNA4-202ENST00000463705 PDLIM4P50479 330 aa11.48□□□□□ -0.57
CHRNA4-202ENST00000463705 ZNF273Q14593 569 aa11.48□□□□□ -0.57
CHRNA4-202ENST00000463705 Q1RN00 199 aa11.48□□□□□ -0.57
CHRNA4-202ENST00000463705 LDLRAD3Q86YD5 345 aa11.48□□□□□ -0.57
CHRNA4-202ENST00000463705 FAM57AQ8TBR7 257 aa11.48□□□□□ -0.57
CHRNA4-202ENST00000463705 HILPDAQ9Y5L2 63 aa11.48□□□□□ -0.57
CHRNA4-202ENST00000463705 CHD5Q8TDI0 1954 aa11.48□□□□□ -0.57
CHRNA4-202ENST00000463705 IGKV1D-43A0A0B4J1Z2 117 aa11.48□□□□□ -0.57
CHRNA4-202ENST00000463705 ADAM11O75078 769 aa11.48□□□□□ -0.57
CHRNA4-202ENST00000463705 LIPFP07098 398 aa11.48□□□□□ -0.57
CHRNA4-202ENST00000463705 MELTFP08582 738 aa11.48□□□□□ -0.57
CHRNA4-202ENST00000463705 ZNF735P0CB33 412 aa11.48□□□□□ -0.57
CHRNA4-202ENST00000463705 FAM3BP58499 235 aaPredicted RBP11.48□□□□□ -0.57
CHRNA4-202ENST00000463705 CD81P60033 236 aa11.48□□□□□ -0.57
CHRNA4-202ENST00000463705 RUNX1Q01196 453 aa11.48□□□□□ -0.57
CHRNA4-202ENST00000463705 TMEM116Q8NCL8 245 aa11.48□□□□□ -0.57
CHRNA4-202ENST00000463705 OR4C13Q8NGP0 309 aa11.48□□□□□ -0.57
CHRNA4-202ENST00000463705 TRBV23-1A0A0A0MS06 115 aa11.48□□□□□ -0.57
CHRNA4-202ENST00000463705 PTBP3O95758 552 aaKnown RBP11.48□□□□□ -0.57
CHRNA4-202ENST00000463705 LINC00869P0C866 280 aa11.48□□□□□ -0.57
CHRNA4-202ENST00000463705 NPBWR2P48146 333 aa11.48□□□□□ -0.57
CHRNA4-202ENST00000463705 H2BFSP57053 126 aa11.48□□□□□ -0.57
CHRNA4-202ENST00000463705 LOXL3P58215 753 aa11.48□□□□□ -0.57
CHRNA4-202ENST00000463705 CXorf66Q5JRM2 361 aaPredicted RBP11.48□□□□□ -0.57
CHRNA4-202ENST00000463705 ZNF818PQ6ZRF7 136 aa11.48□□□□□ -0.57
CHRNA4-202ENST00000463705 ABHD12Q8N2K0 398 aa11.48□□□□□ -0.57
CHRNA4-202ENST00000463705 STPG3Q8N7X2 389 aa11.48□□□□□ -0.57
CHRNA4-202ENST00000463705 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.48□□□□□ -0.57
CHRNA4-202ENST00000463705 TPRP12270 2363 aaKnown RBP11.48□□□□□ -0.57
CHRNA4-202ENST00000463705 G0S2P27469 103 aa11.48□□□□□ -0.57
CHRNA4-202ENST00000463705 TNFSF10P50591 281 aa11.48□□□□□ -0.57
CHRNA4-202ENST00000463705 IZUMO4Q1ZYL8 232 aa11.48□□□□□ -0.57
CHRNA4-202ENST00000463705 POC1AQ8NBT0 407 aa11.48□□□□□ -0.57
CHRNA4-202ENST00000463705 MEGF10Q96KG7 1140 aa11.48□□□□□ -0.57
CHRNA4-202ENST00000463705 MAP1LC3CQ9BXW4 147 aa11.48□□□□□ -0.57
CHRNA4-202ENST00000463705 PITPNC1Q9UKF7 332 aa11.48□□□□□ -0.57
CHRNA4-202ENST00000463705 RALYQ9UKM9 306 aaKnown RBP11.48□□□□□ -0.57
CHRNA4-202ENST00000463705 SVILO95425 2214 aa11.47□□□□□ -0.57
CHRNA4-202ENST00000463705 SCN2AQ99250 2005 aa11.47□□□□□ -0.57
CHRNA4-202ENST00000463705 LOC105371242A0A075B767 164 aa11.47□□□□□ -0.57
CHRNA4-202ENST00000463705 TM4SF5O14894 197 aa11.47□□□□□ -0.57
CHRNA4-202ENST00000463705 CSRP1P21291 193 aaKnown RBP11.47□□□□□ -0.57
CHRNA4-202ENST00000463705 CFHR1Q03591 330 aa11.47□□□□□ -0.57
CHRNA4-202ENST00000463705 METTL26Q96S19 204 aa11.47□□□□□ -0.57
CHRNA4-202ENST00000463705 SRD5A3Q9H8P0 318 aa11.47□□□□□ -0.57
CHRNA4-202ENST00000463705 BMPR1BO00238 502 aa11.47□□□□□ -0.57
CHRNA4-202ENST00000463705 RND3P61587 244 aa11.47□□□□□ -0.57
CHRNA4-202ENST00000463705 QTRT1Q9BXR0 403 aaKnown RBP11.47□□□□□ -0.57
CHRNA4-202ENST00000463705 APELAP0DMC3 54 aa11.47□□□□□ -0.57
CHRNA4-202ENST00000463705 RPL13AP40429 203 aaKnown RBP11.47□□□□□ -0.57
CHRNA4-202ENST00000463705 HERVK_113P61574 105 aa11.47□□□□□ -0.57
CHRNA4-202ENST00000463705 ZNF362Q5T0B9 420 aaPredicted RBP11.47□□□□□ -0.57
CHRNA4-202ENST00000463705 ACP7Q6ZNF0 438 aa11.47□□□□□ -0.57
CHRNA4-202ENST00000463705 RAB24Q969Q5 203 aa11.47□□□□□ -0.57
CHRNA4-202ENST00000463705 RABAC1Q9UI14 185 aa11.47□□□□□ -0.57
CHRNA4-202ENST00000463705 HSPB8Q9UJY1 196 aa11.47□□□□□ -0.57
CHRNA4-202ENST00000463705 SIP14410 1827 aa11.47□□□□□ -0.57
CHRNA4-202ENST00000463705 ZDBF2Q9HCK1 2354 aa11.47□□□□□ -0.57
CHRNA4-202ENST00000463705 DNAJC13O75165 2243 aa11.47□□□□□ -0.57
CHRNA4-202ENST00000463705 TCAPO15273 167 aa11.47□□□□□ -0.57
CHRNA4-202ENST00000463705 CELA3AP09093 270 aa11.47□□□□□ -0.57
CHRNA4-202ENST00000463705 GLIPR1P48060 266 aa11.47□□□□□ -0.57
CHRNA4-202ENST00000463705 MEOX2P50222 304 aa11.47□□□□□ -0.57
CHRNA4-202ENST00000463705 MFAP4P55083 255 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms