RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 MOB3BQ86TA1 216 aa13.57□□□□□ -0.24
SMC4-204ENST00000462787 DOLPP1Q86YN1 238 aa13.57□□□□□ -0.24
SMC4-204ENST00000462787 OR1L8Q8NGR8 309 aa13.57□□□□□ -0.24
SMC4-204ENST00000462787 FAM216AQ8WUB2 273 aa13.57□□□□□ -0.24
SMC4-204ENST00000462787 FLYWCH2Q96CP2 140 aaKnown RBP13.57□□□□□ -0.24
SMC4-204ENST00000462787 PKIBQ9C010 78 aa13.57□□□□□ -0.24
SMC4-204ENST00000462787 WNT5AP41221 380 aa13.57□□□□□ -0.24
SMC4-204ENST00000462787 MESP2Q0VG99 397 aa13.57□□□□□ -0.24
SMC4-204ENST00000462787 HYAL1Q12794 435 aa13.57□□□□□ -0.24
SMC4-204ENST00000462787 FXYD3Q14802 87 aa13.57□□□□□ -0.24
SMC4-204ENST00000462787 KCNMB1Q16558 191 aa13.57□□□□□ -0.24
SMC4-204ENST00000462787 TUSC5Q8IXB3 177 aa13.57□□□□□ -0.24
SMC4-204ENST00000462787 GBGT1Q8N5D6 347 aa13.57□□□□□ -0.24
SMC4-204ENST00000462787 NRXN2Q9P2S2 1712 aa13.57□□□□□ -0.24
SMC4-204ENST00000462787 COL4A5P29400 1685 aa13.57□□□□□ -0.24
SMC4-204ENST00000462787 A0A087WV48 116 aa13.56□□□□□ -0.24
SMC4-204ENST00000462787 IGHV3-13P01766 116 aa13.56□□□□□ -0.24
SMC4-204ENST00000462787 IGHV3-7P01780 117 aa13.56□□□□□ -0.24
SMC4-204ENST00000462787 ACP1P24666 158 aa13.56□□□□□ -0.24
SMC4-204ENST00000462787 KCNS1Q96KK3 526 aa13.56□□□□□ -0.24
SMC4-204ENST00000462787 C19orf24Q9BVV8 132 aa13.56□□□□□ -0.24
SMC4-204ENST00000462787 WFDC1Q9HC57 220 aa13.56□□□□□ -0.24
SMC4-204ENST00000462787 DLL3Q9NYJ7 618 aa13.56□□□□□ -0.24
SMC4-204ENST00000462787 A0A0J9YW62 118 aa13.56□□□□□ -0.24
SMC4-204ENST00000462787 LINC01565O15544 149 aa13.56□□□□□ -0.24
SMC4-204ENST00000462787 GCHFRP30047 84 aa13.56□□□□□ -0.24
SMC4-204ENST00000462787 CCL20P78556 96 aa13.56□□□□□ -0.24
SMC4-204ENST00000462787 C1orf194Q5T5A4 169 aa13.56□□□□□ -0.24
SMC4-204ENST00000462787 SCARF2Q96GP6 870 aaPredicted RBP13.56□□□□□ -0.24
SMC4-204ENST00000462787 SLC25A33Q9BSK2 321 aa13.56□□□□□ -0.24
SMC4-204ENST00000462787 MRPL37Q9BZE1 423 aaKnown RBP13.56□□□□□ -0.24
SMC4-204ENST00000462787 PARP14Q460N5 1801 aa13.56□□□□□ -0.24
SMC4-204ENST00000462787 RBPJQ06330 500 aa13.56□□□□□ -0.24
SMC4-204ENST00000462787 GUSBP11Q6P575 273 aa13.56□□□□□ -0.24
SMC4-204ENST00000462787 SCGB1D4Q6XE38 83 aa13.56□□□□□ -0.24
SMC4-204ENST00000462787 ZNF525Q8N782 197 aa13.56□□□□□ -0.24
SMC4-204ENST00000462787 TINAGQ9UJW2 476 aa13.56□□□□□ -0.24
SMC4-204ENST00000462787 SPINK2P20155 84 aa13.56□□□□□ -0.24
SMC4-204ENST00000462787 CRYBB3P26998 211 aa13.56□□□□□ -0.24
SMC4-204ENST00000462787 IZUMO4Q1ZYL8 232 aa13.56□□□□□ -0.24
SMC4-204ENST00000462787 NPCDR1Q9BY65 106 aa13.56□□□□□ -0.24
SMC4-204ENST00000462787 RALGAPA2Q2PPJ7 1873 aa13.56□□□□□ -0.24
SMC4-204ENST00000462787 EGR1P18146 543 aa13.55□□□□□ -0.24
SMC4-204ENST00000462787 C10orf128Q5T292 105 aa13.55□□□□□ -0.24
SMC4-204ENST00000462787 ZADH2Q8N4Q0 377 aa13.55□□□□□ -0.24
SMC4-204ENST00000462787 PAQR4Q8N4S7 273 aaPredicted RBP13.55□□□□□ -0.24
SMC4-204ENST00000462787 LRTM2Q8N967 370 aa13.55□□□□□ -0.24
SMC4-204ENST00000462787 WNT10AQ9GZT5 417 aa13.55□□□□□ -0.24
SMC4-204ENST00000462787 IGHV1OR15-9A0A0B4J2B8 117 aa13.55□□□□□ -0.24
SMC4-204ENST00000462787 CRYABP02511 175 aaKnown RBP13.55□□□□□ -0.24
SMC4-204ENST00000462787 CLDN18P56856 261 aa13.55□□□□□ -0.24
SMC4-204ENST00000462787 RPL11P62913 178 aaKnown RBP13.55□□□□□ -0.24
SMC4-204ENST00000462787 SPEM1Q8N4L4 309 aa13.55□□□□□ -0.24
SMC4-204ENST00000462787 OR2Y1Q8NGV0 311 aa13.55□□□□□ -0.24
SMC4-204ENST00000462787 ABHD3Q8WU67 409 aa13.55□□□□□ -0.24
SMC4-204ENST00000462787 COL11A2P13942 1736 aaPredicted RBP13.55□□□□□ -0.24
SMC4-204ENST00000462787 SHISA7A6NL88 538 aa13.55□□□□□ -0.24
SMC4-204ENST00000462787 TNFSF13O75888 250 aa13.55□□□□□ -0.24
SMC4-204ENST00000462787 OR2H2O95918 312 aa13.55□□□□□ -0.24
SMC4-204ENST00000462787 HERVK_113P61574 105 aa13.55□□□□□ -0.24
SMC4-204ENST00000462787 SELENOTP62341 195 aa13.55□□□□□ -0.24
SMC4-204ENST00000462787 FAM89BQ8N5H3 189 aa13.55□□□□□ -0.24
SMC4-204ENST00000462787 K7ESF4 209 aa13.55□□□□□ -0.24
SMC4-204ENST00000462787 SERF1AO75920 110 aa13.55□□□□□ -0.24
SMC4-204ENST00000462787 OR8B2Q96RD0 313 aa13.55□□□□□ -0.24
SMC4-204ENST00000462787 PRDM13Q9H4Q3 707 aa13.55□□□□□ -0.24
SMC4-204ENST00000462787 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.54□□□□□ -0.24
SMC4-204ENST00000462787 MYOZ3Q8TDC0 251 aa13.54□□□□□ -0.24
SMC4-204ENST00000462787 LIPFP07098 398 aa13.54□□□□□ -0.24
SMC4-204ENST00000462787 C8orf88P0DMB2 117 aa13.54□□□□□ -0.24
SMC4-204ENST00000462787 LHFPL1Q86WI0 220 aa13.54□□□□□ -0.24
SMC4-204ENST00000462787 MBD3L1Q8WWY6 194 aa13.54□□□□□ -0.24
SMC4-204ENST00000462787 IMMP2LQ96T52 175 aa13.54□□□□□ -0.24
SMC4-204ENST00000462787 PHF7Q9BWX1 381 aaPredicted RBP13.54□□□□□ -0.24
SMC4-204ENST00000462787 IGHV2-70P01814 119 aa13.54□□□□□ -0.24
SMC4-204ENST00000462787 CENPWQ5EE01 88 aa13.54□□□□□ -0.24
SMC4-204ENST00000462787 OR1L1Q8NH94 360 aa13.54□□□□□ -0.24
SMC4-204ENST00000462787 TRAV1-1A0A0B4J248 108 aa13.54□□□□□ -0.24
SMC4-204ENST00000462787 LYL1P12980 280 aa13.54□□□□□ -0.24
SMC4-204ENST00000462787 RPL31P62899 125 aaKnown RBP13.54□□□□□ -0.24
SMC4-204ENST00000462787 TIMD4Q96H15 378 aa13.54□□□□□ -0.24
SMC4-204ENST00000462787 CDX2Q99626 313 aaPredicted RBP13.54□□□□□ -0.24
SMC4-204ENST00000462787 PRDM14Q9GZV8 571 aa13.54□□□□□ -0.24
SMC4-204ENST00000462787 SRSF9Q13242 221 aaKnown RBP eCLIP13.53□□□□□ -0.24
SMC4-204ENST00000462787 SSPNQ14714 243 aa13.53□□□□□ -0.24
SMC4-204ENST00000462787 GUCD1Q96NT3 240 aa13.53□□□□□ -0.24
SMC4-204ENST00000462787 LDLRAD4O15165 306 aa13.53□□□□□ -0.24
SMC4-204ENST00000462787 PSMB2P49721 201 aa13.53□□□□□ -0.24
SMC4-204ENST00000462787 OR10AG1Q8NH19 301 aa13.53□□□□□ -0.24
SMC4-204ENST00000462787 FZR1Q9UM11 496 aa13.53□□□□□ -0.24
SMC4-204ENST00000462787 A0A1W2PQF6 199 aa13.53□□□□□ -0.24
SMC4-204ENST00000462787 IGKV3-11P04433 115 aa13.53□□□□□ -0.24
SMC4-204ENST00000462787 NRN1Q9NPD7 142 aa13.53□□□□□ -0.24
SMC4-204ENST00000462787 GLRX2Q9NS18 164 aa13.53□□□□□ -0.24
SMC4-204ENST00000462787 NCBP2LA6PVI3 153 aaKnown RBP13.53□□□□□ -0.24
SMC4-204ENST00000462787 CA7P43166 264 aa13.53□□□□□ -0.24
SMC4-204ENST00000462787 ZNF658BQ4V348 819 aaPredicted RBP13.53□□□□□ -0.24
SMC4-204ENST00000462787 SFTPA2Q8IWL1 248 aa13.53□□□□□ -0.24
SMC4-204ENST00000462787 PLXNB2O15031 1838 aa13.53□□□□□ -0.24
SMC4-204ENST00000462787 NYNRINQ9P2P1 1898 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms