RNA–Protein interactions for RNA: ENST00000462673.1

USP4-207, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 709 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-207ENST00000462673 LBHQ53QV2 105 aaPredicted RBP6.47□□□□□ -1.37
USP4-207ENST00000462673 SPRNQ5BIV9 151 aa6.47□□□□□ -1.37
USP4-207ENST00000462673 C9orf152Q5JTZ5 239 aa6.47□□□□□ -1.37
USP4-207ENST00000462673 GPR157Q5UAW9 335 aa6.47□□□□□ -1.37
USP4-207ENST00000462673 GLIPR1L1Q6UWM5 242 aa6.47□□□□□ -1.37
USP4-207ENST00000462673 ACP7Q6ZNF0 438 aa6.47□□□□□ -1.37
USP4-207ENST00000462673 SSX9Q7RTT3 188 aa6.47□□□□□ -1.37
USP4-207ENST00000462673 LINC00596Q86U02 117 aa6.47□□□□□ -1.37
USP4-207ENST00000462673 FOXRED2Q8IWF2 684 aa6.47□□□□□ -1.37
USP4-207ENST00000462673 FAM58AQ8N1B3 248 aa6.47□□□□□ -1.37
USP4-207ENST00000462673 FAM24BQ8N5W8 94 aa6.47□□□□□ -1.37
USP4-207ENST00000462673 CD300LFQ8TDQ1 290 aa6.47□□□□□ -1.37
USP4-207ENST00000462673 NPRL2Q8WTW4 380 aa6.47□□□□□ -1.37
USP4-207ENST00000462673 MAFIPQ8WZ33 124 aa6.47□□□□□ -1.37
USP4-207ENST00000462673 ISOC2Q96AB3 205 aa6.47□□□□□ -1.37
USP4-207ENST00000462673 TMEM186Q96B77 213 aa6.47□□□□□ -1.37
USP4-207ENST00000462673 RTBDNQ9BSG5 229 aaPredicted RBP6.47□□□□□ -1.37
USP4-207ENST00000462673 NICN1Q9BSH3 213 aa6.47□□□□□ -1.37
USP4-207ENST00000462673 KRTAP3-3Q9BYR6 98 aa6.47□□□□□ -1.37
USP4-207ENST00000462673 KRTAP3-2Q9BYR7 98 aa6.47□□□□□ -1.37
USP4-207ENST00000462673 YAE1D1Q9NRH1 226 aa6.47□□□□□ -1.37
USP4-207ENST00000462673 CDC42EP3Q9UKI2 254 aa6.47□□□□□ -1.37
USP4-207ENST00000462673 POLR3KQ9Y2Y1 108 aaPredicted RBP6.47□□□□□ -1.37
USP4-207ENST00000462673 CREBBPQ92793 2442 aa6.47□□□□□ -1.37
USP4-207ENST00000462673 PRRC2AP48634 2157 aaKnown RBP6.47□□□□□ -1.37
USP4-207ENST00000462673 IGKV1-9A0A0C4DH69 117 aa6.46□□□□□ -1.38
USP4-207ENST00000462673 CRYM-AS1A6NIL9 109 aa6.46□□□□□ -1.38
USP4-207ENST00000462673 K7N7A8 449 aa6.46□□□□□ -1.38
USP4-207ENST00000462673 PPP1R2P9O14990 202 aa6.46□□□□□ -1.38
USP4-207ENST00000462673 NDUFS6O75380 124 aaKnown RBP6.46□□□□□ -1.38
USP4-207ENST00000462673 CRTAPO75718 401 aaPredicted RBP6.46□□□□□ -1.38
USP4-207ENST00000462673 RHBDL1O75783 438 aa6.46□□□□□ -1.38
USP4-207ENST00000462673 ZNF205O95201 554 aa6.46□□□□□ -1.38
USP4-207ENST00000462673 LY6G6DO95868 133 aa6.46□□□□□ -1.38
USP4-207ENST00000462673 SCGB1D2O95969 90 aa6.46□□□□□ -1.38
USP4-207ENST00000462673 IGHV4-31P0DP07 118 aa6.46□□□□□ -1.38
USP4-207ENST00000462673 ANOS1P23352 680 aa6.46□□□□□ -1.38
USP4-207ENST00000462673 RPS10P46783 165 aaKnown RBP6.46□□□□□ -1.38
USP4-207ENST00000462673 SNU13P55769 128 aaKnown RBP6.46□□□□□ -1.38
USP4-207ENST00000462673 PKIAP61925 76 aa6.46□□□□□ -1.38
USP4-207ENST00000462673 AKAP6Q13023 2319 aa6.46□□□□□ -1.38
USP4-207ENST00000462673 ZNF266Q14584 549 aa6.46□□□□□ -1.38
USP4-207ENST00000462673 ZNF146Q15072 292 aa6.46□□□□□ -1.38
USP4-207ENST00000462673 ZNF674Q2M3X9 581 aa6.46□□□□□ -1.38
USP4-207ENST00000462673 SOHLH1Q5JUK2 328 aa6.46□□□□□ -1.38
USP4-207ENST00000462673 AADACL3Q5VUY0 350 aa6.46□□□□□ -1.38
USP4-207ENST00000462673 REC114Q7Z4M0 266 aa6.46□□□□□ -1.38
USP4-207ENST00000462673 WDR86Q86TI4 376 aa6.46□□□□□ -1.38
USP4-207ENST00000462673 CALHM1Q8IU99 346 aa6.46□□□□□ -1.38
USP4-207ENST00000462673 CIARTQ8N365 385 aaPredicted RBP6.46□□□□□ -1.38
USP4-207ENST00000462673 SLAMF9Q96A28 289 aa6.46□□□□□ -1.38
USP4-207ENST00000462673 MSI2Q96DH6 328 aaKnown RBP6.46□□□□□ -1.38
USP4-207ENST00000462673 YPEL4Q96NS1 127 aa6.46□□□□□ -1.38
USP4-207ENST00000462673 C20orf24Q9BUV8 137 aa6.46□□□□□ -1.38
USP4-207ENST00000462673 SUCNR1Q9BXA5 334 aa6.46□□□□□ -1.38
USP4-207ENST00000462673 SMIM3Q9BZL3 60 aa6.46□□□□□ -1.38
USP4-207ENST00000462673 HIF1ANQ9NWT6 349 aa6.46□□□□□ -1.38
USP4-207ENST00000462673 PRR13Q9NZ81 148 aa6.46□□□□□ -1.38
USP4-207ENST00000462673 MTCH1Q9NZJ7 389 aa6.46□□□□□ -1.38
USP4-207ENST00000462673 KIAA2026Q5HYC2 2103 aa6.46□□□□□ -1.38
USP4-207ENST00000462673 A0A096LNT2 108 aa6.45□□□□□ -1.38
USP4-207ENST00000462673 KIR2DS1A0A191URI9 304 aa6.45□□□□□ -1.38
USP4-207ENST00000462673 CXorf65A6NEN9 183 aa6.45□□□□□ -1.38
USP4-207ENST00000462673 DVL1O14640 695 aa6.45□□□□□ -1.38
USP4-207ENST00000462673 TNFRSF13BO14836 293 aaPredicted RBP6.45□□□□□ -1.38
USP4-207ENST00000462673 DEGS1O15121 323 aa6.45□□□□□ -1.38
USP4-207ENST00000462673 SLC31A2O15432 143 aa6.45□□□□□ -1.38
USP4-207ENST00000462673 SOCS1O15524 211 aa6.45□□□□□ -1.38
USP4-207ENST00000462673 SYNGR1O43759 233 aa6.45□□□□□ -1.38
USP4-207ENST00000462673 ENSAO43768 121 aaKnown RBP6.45□□□□□ -1.38
USP4-207ENST00000462673 PITX3O75364 302 aa6.45□□□□□ -1.38
USP4-207ENST00000462673 HBE1P02100 147 aa6.45□□□□□ -1.38
USP4-207ENST00000462673 PPIAL4GP0DN37 164 aa6.45□□□□□ -1.38
USP4-207ENST00000462673 PSG2P11465 335 aa6.45□□□□□ -1.38
USP4-207ENST00000462673 NDUFB7P17568 137 aa6.45□□□□□ -1.38
USP4-207ENST00000462673 PI3P19957 117 aa6.45□□□□□ -1.38
USP4-207ENST00000462673 LMO1P25800 156 aa6.45□□□□□ -1.38
USP4-207ENST00000462673 DUSP1P28562 367 aa6.45□□□□□ -1.38
USP4-207ENST00000462673 GPX4P36969 197 aaPredicted RBP6.45□□□□□ -1.38
USP4-207ENST00000462673 OR3A4PP47883 348 aa6.45□□□□□ -1.38
USP4-207ENST00000462673 BPIFB3P59826 476 aa6.45□□□□□ -1.38
USP4-207ENST00000462673 FGF12P61328 243 aa6.45□□□□□ -1.38
USP4-207ENST00000462673 ERVK11-1P61568 191 aa6.45□□□□□ -1.38
USP4-207ENST00000462673 DMRTC1Q5HYR2 192 aa6.45□□□□□ -1.38
USP4-207ENST00000462673 GGNBP1Q5YKI7 109 aa6.45□□□□□ -1.38
USP4-207ENST00000462673 WDR25Q64LD2 544 aaPredicted RBP6.45□□□□□ -1.38
USP4-207ENST00000462673 STUMQ69YW2 141 aa6.45□□□□□ -1.38
USP4-207ENST00000462673 ASCL4Q6XD76 172 aa6.45□□□□□ -1.38
USP4-207ENST00000462673 TMEM182Q6ZP80 229 aaPredicted RBP6.45□□□□□ -1.38
USP4-207ENST00000462673 ZNF788Q6ZQV5 615 aa6.45□□□□□ -1.38
USP4-207ENST00000462673 OSR2Q8N2R0 312 aa6.45□□□□□ -1.38
USP4-207ENST00000462673 CCDC71LQ8N9Z2 235 aa6.45□□□□□ -1.38
USP4-207ENST00000462673 ZNF383Q8NA42 475 aa6.45□□□□□ -1.38
USP4-207ENST00000462673 MAPK1IP1LQ8NDC0 245 aa6.45□□□□□ -1.38
USP4-207ENST00000462673 OR5R1Q8NH85 324 aa6.45□□□□□ -1.38
USP4-207ENST00000462673 FAM213BQ8TBF2 198 aa6.45□□□□□ -1.38
USP4-207ENST00000462673 SDSLQ96GA7 329 aa6.45□□□□□ -1.38
USP4-207ENST00000462673 ARHGAP5-AS1Q96IT6 56 aa6.45□□□□□ -1.38
USP4-207ENST00000462673 ABHD14BQ96IU4 210 aa6.45□□□□□ -1.38
USP4-207ENST00000462673 SNX22Q96L94 193 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms