RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 HSPA13P48723 471 aa1.9□□□□□ -2.11
SMC4-203ENST00000462668 EIF4EBP2Q13542 120 aaPredicted RBP1.9□□□□□ -2.11
SMC4-203ENST00000462668 UBE2SQ16763 222 aa1.9□□□□□ -2.11
SMC4-203ENST00000462668 C9orf64Q5T6V5 341 aa1.9□□□□□ -2.11
SMC4-203ENST00000462668 PRSS58Q8IYP2 241 aa1.9□□□□□ -2.11
SMC4-203ENST00000462668 HES4Q9HCC6 221 aa1.9□□□□□ -2.11
SMC4-203ENST00000462668 IGKV3D-15A0A087WSY6 115 aa1.9□□□□□ -2.11
SMC4-203ENST00000462668 C5orf63A6NC05 138 aa1.9□□□□□ -2.11
SMC4-203ENST00000462668 OR7C2O60412 319 aa1.9□□□□□ -2.11
SMC4-203ENST00000462668 PLIN3O60664 434 aa1.9□□□□□ -2.11
SMC4-203ENST00000462668 POP7O75817 140 aaKnown RBP1.9□□□□□ -2.11
SMC4-203ENST00000462668 SLC25A14O95258 325 aaPredicted RBP1.9□□□□□ -2.11
SMC4-203ENST00000462668 ESDP10768 282 aa1.9□□□□□ -2.11
SMC4-203ENST00000462668 SPNP16150 400 aa1.9□□□□□ -2.11
SMC4-203ENST00000462668 UBE2AP49459 152 aa1.9□□□□□ -2.11
SMC4-203ENST00000462668 IAH1Q2TAA2 248 aaPredicted RBP1.9□□□□□ -2.11
SMC4-203ENST00000462668 C1orf194Q5T5A4 169 aa1.9□□□□□ -2.11
SMC4-203ENST00000462668 KRTCAP2Q8N6L1 136 aa1.9□□□□□ -2.11
SMC4-203ENST00000462668 ZFP62Q8NB50 900 aaPredicted RBP1.9□□□□□ -2.11
SMC4-203ENST00000462668 DDA1Q9BW61 102 aa1.9□□□□□ -2.11
SMC4-203ENST00000462668 IDI2-AS1Q9NZ38 188 aa1.9□□□□□ -2.11
SMC4-203ENST00000462668 TAC3Q9UHF0 121 aa1.9□□□□□ -2.11
SMC4-203ENST00000462668 ZFHX2Q9C0A1 2572 aaPredicted RBP1.89□□□□□ -2.11
SMC4-203ENST00000462668 LOC285556D6RIA3 1793 aa1.89□□□□□ -2.11
SMC4-203ENST00000462668 A8MWL6 223 aa1.89□□□□□ -2.11
SMC4-203ENST00000462668 FABP1P07148 127 aa1.89□□□□□ -2.11
SMC4-203ENST00000462668 TGFBR2P37173 567 aa1.89□□□□□ -2.11
SMC4-203ENST00000462668 ACOT2P49753 483 aa1.89□□□□□ -2.11
SMC4-203ENST00000462668 DSCR10P59022 87 aa1.89□□□□□ -2.11
SMC4-203ENST00000462668 RAP1AP62834 184 aa1.89□□□□□ -2.11
SMC4-203ENST00000462668 UNQ9165/PRO28630Q6UXU0 137 aa1.89□□□□□ -2.11
SMC4-203ENST00000462668 LINC00596Q86U02 117 aa1.89□□□□□ -2.11
SMC4-203ENST00000462668 COMMD7Q86VX2 200 aa1.89□□□□□ -2.11
SMC4-203ENST00000462668 DEFB125Q8N687 156 aa1.89□□□□□ -2.11
SMC4-203ENST00000462668 ERMNQ8TAM6 284 aa1.89□□□□□ -2.11
SMC4-203ENST00000462668 AP3S1Q92572 193 aa1.89□□□□□ -2.11
SMC4-203ENST00000462668 TMBIM1Q969X1 311 aa1.89□□□□□ -2.11
SMC4-203ENST00000462668 ACY3Q96HD9 319 aa1.89□□□□□ -2.11
SMC4-203ENST00000462668 EBNA1BP2Q99848 306 aaKnown RBP1.89□□□□□ -2.11
SMC4-203ENST00000462668 SLC25A31Q9H0C2 315 aa1.89□□□□□ -2.11
SMC4-203ENST00000462668 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.89□□□□□ -2.11
SMC4-203ENST00000462668 DDX60LQ5H9U9 1706 aaKnown RBP1.89□□□□□ -2.11
SMC4-203ENST00000462668 KIF20BQ96Q89 1820 aa1.89□□□□□ -2.11
SMC4-203ENST00000462668 SCN2AQ99250 2005 aa1.89□□□□□ -2.11
SMC4-203ENST00000462668 ZNF609O15014 1411 aa1.89□□□□□ -2.11
SMC4-203ENST00000462668 IGHV3-49A0A0A0MS15 119 aa1.89□□□□□ -2.11
SMC4-203ENST00000462668 IGHV1-3A0A0C4DH29 117 aa1.89□□□□□ -2.11
SMC4-203ENST00000462668 A0A0G2JMP0 313 aa1.89□□□□□ -2.11
SMC4-203ENST00000462668 A0A0X1KG70 313 aa1.89□□□□□ -2.11
SMC4-203ENST00000462668 PGRMC1O00264 195 aaKnown RBP1.89□□□□□ -2.11
SMC4-203ENST00000462668 SERPINA1P01009 418 aa1.89□□□□□ -2.11
SMC4-203ENST00000462668 HOXB6P17509 224 aaKnown RBP1.89□□□□□ -2.11
SMC4-203ENST00000462668 OPRM1P35372 400 aa1.89□□□□□ -2.11
SMC4-203ENST00000462668 CBX5P45973 191 aa1.89□□□□□ -2.11
SMC4-203ENST00000462668 CMC4P56277 68 aaPredicted RBP1.89□□□□□ -2.11
SMC4-203ENST00000462668 MRPS25P82663 173 aaKnown RBP1.89□□□□□ -2.11
SMC4-203ENST00000462668 HPCAP84074 193 aa1.89□□□□□ -2.11
SMC4-203ENST00000462668 ZCWPW2Q504Y3 356 aa1.89□□□□□ -2.11
SMC4-203ENST00000462668 FAM71E1Q6IPT2 247 aa1.89□□□□□ -2.11
SMC4-203ENST00000462668 Q6ZSR6 202 aa1.89□□□□□ -2.11
SMC4-203ENST00000462668 PHF13Q86YI8 300 aaPredicted RBP1.89□□□□□ -2.11
SMC4-203ENST00000462668 OR4M2Q8NGB6 313 aa1.89□□□□□ -2.11
SMC4-203ENST00000462668 YPEL4Q96NS1 127 aa1.89□□□□□ -2.11
SMC4-203ENST00000462668 MRPL20Q9BYC9 149 aaKnown RBP1.89□□□□□ -2.11
SMC4-203ENST00000462668 ZNF436Q9C0F3 470 aaPredicted RBP1.89□□□□□ -2.11
SMC4-203ENST00000462668 C11orf49Q9H6J7 331 aa1.89□□□□□ -2.11
SMC4-203ENST00000462668 DEC1Q9P2X7 70 aa1.89□□□□□ -2.11
SMC4-203ENST00000462668 TIMM22Q9Y584 194 aa1.89□□□□□ -2.11
SMC4-203ENST00000462668 REG1AP05451 166 aa1.89□□□□□ -2.11
SMC4-203ENST00000462668 TMEM267Q0VDI3 215 aaPredicted RBP1.89□□□□□ -2.11
SMC4-203ENST00000462668 ELOCQ15369 112 aa1.89□□□□□ -2.11
SMC4-203ENST00000462668 SPINK14Q6IE38 97 aa1.89□□□□□ -2.11
SMC4-203ENST00000462668 OR10K2Q6IF99 312 aa1.89□□□□□ -2.11
SMC4-203ENST00000462668 RPRMLQ8N4K4 120 aa1.89□□□□□ -2.11
SMC4-203ENST00000462668 CD177Q8N6Q3 437 aa1.89□□□□□ -2.11
SMC4-203ENST00000462668 OR51D1Q8NGF3 324 aa1.89□□□□□ -2.11
SMC4-203ENST00000462668 OR5H2Q8NGV7 314 aa1.89□□□□□ -2.11
SMC4-203ENST00000462668 ZNF799Q96GE5 643 aa1.89□□□□□ -2.11
SMC4-203ENST00000462668 DCSTAMPQ9H295 470 aa1.89□□□□□ -2.11
SMC4-203ENST00000462668 LINC00574Q9H8X3 128 aa1.89□□□□□ -2.11
SMC4-203ENST00000462668 MRPL27Q9P0M9 148 aaKnown RBP1.89□□□□□ -2.11
SMC4-203ENST00000462668 LINC00527Q9UJ94 153 aa1.89□□□□□ -2.11
SMC4-203ENST00000462668 CFAP54Q96N23 3096 aa1.88□□□□□ -2.11
SMC4-203ENST00000462668 CFAP47Q6ZTR5 3102 aa1.88□□□□□ -2.11
SMC4-203ENST00000462668 DHRS3O75911 302 aa1.88□□□□□ -2.11
SMC4-203ENST00000462668 KCNE1P15382 129 aa1.88□□□□□ -2.11
SMC4-203ENST00000462668 FOXA1P55317 472 aa1.88□□□□□ -2.11
SMC4-203ENST00000462668 ATP5G2Q06055 141 aa1.88□□□□□ -2.11
SMC4-203ENST00000462668 TMED2Q15363 201 aa1.88□□□□□ -2.11
SMC4-203ENST00000462668 RNF212Q495C1 297 aa1.88□□□□□ -2.11
SMC4-203ENST00000462668 HENMT1Q5T8I9 393 aaKnown RBP1.88□□□□□ -2.11
SMC4-203ENST00000462668 MDP1Q86V88 176 aa1.88□□□□□ -2.11
SMC4-203ENST00000462668 CCDC112Q8NEF3 446 aa1.88□□□□□ -2.11
SMC4-203ENST00000462668 OR9I1Q8NGQ6 314 aa1.88□□□□□ -2.11
SMC4-203ENST00000462668 ELSPBP1Q96BH3 223 aa1.88□□□□□ -2.11
SMC4-203ENST00000462668 RNF5Q99942 180 aa1.88□□□□□ -2.11
SMC4-203ENST00000462668 GTSF1LQ9H1H1 148 aa1.88□□□□□ -2.11
SMC4-203ENST00000462668 TMEM38BQ9NVV0 291 aa1.88□□□□□ -2.11
SMC4-203ENST00000462668 FKBP14Q9NWM8 211 aa1.88□□□□□ -2.11
SMC4-203ENST00000462668 CHD7Q9P2D1 2997 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms