RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 HBG2P69892 147 aa10.42□□□□□ -0.74
COL4A6-204ENST00000461897 ARL16Q0P5N6 197 aa10.42□□□□□ -0.74
COL4A6-204ENST00000461897 TMEM267Q0VDI3 215 aaPredicted RBP10.42□□□□□ -0.74
COL4A6-204ENST00000461897 HIST2H2BEQ16778 126 aa10.42□□□□□ -0.74
COL4A6-204ENST00000461897 MSMPQ1L6U9 139 aa10.42□□□□□ -0.74
COL4A6-204ENST00000461897 ZNF674Q2M3X9 581 aa10.42□□□□□ -0.74
COL4A6-204ENST00000461897 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.42□□□□□ -0.74
COL4A6-204ENST00000461897 ZNF787Q6DD87 383 aa10.42□□□□□ -0.74
COL4A6-204ENST00000461897 HIST1H2BHQ93079 126 aa10.42□□□□□ -0.74
COL4A6-204ENST00000461897 RCC1LQ96I51 464 aaKnown RBP10.42□□□□□ -0.74
COL4A6-204ENST00000461897 HIST1H2BNQ99877 126 aa10.42□□□□□ -0.74
COL4A6-204ENST00000461897 HIST1H2BMQ99879 126 aa10.42□□□□□ -0.74
COL4A6-204ENST00000461897 VKORC1Q9BQB6 163 aa10.42□□□□□ -0.74
COL4A6-204ENST00000461897 PSENENQ9NZ42 101 aa10.42□□□□□ -0.74
COL4A6-204ENST00000461897 OR1A1Q9P1Q5 309 aa10.42□□□□□ -0.74
COL4A6-204ENST00000461897 OR14J1Q9UGF5 321 aa10.42□□□□□ -0.74
COL4A6-204ENST00000461897 WIPI2Q9Y4P8 454 aa10.42□□□□□ -0.74
COL4A6-204ENST00000461897 TRBV24-1A0A075B6N3 115 aa10.41□□□□□ -0.74
COL4A6-204ENST00000461897 TGIF2-C20orf24A0A0A6YYL0 155 aa10.41□□□□□ -0.74
COL4A6-204ENST00000461897 PHOX2AO14813 284 aa10.41□□□□□ -0.74
COL4A6-204ENST00000461897 YIF1AO95070 293 aa10.41□□□□□ -0.74
COL4A6-204ENST00000461897 NXPH3O95157 252 aa10.41□□□□□ -0.74
COL4A6-204ENST00000461897 ZNF718Q3SXZ3 478 aa10.41□□□□□ -0.74
COL4A6-204ENST00000461897 TMEM41BQ5BJD5 291 aa10.41□□□□□ -0.74
COL4A6-204ENST00000461897 SLC25A24Q6NUK1 477 aa10.41□□□□□ -0.74
COL4A6-204ENST00000461897 Q6ZR03 302 aa10.41□□□□□ -0.74
COL4A6-204ENST00000461897 AGMATQ9BSE5 352 aa10.41□□□□□ -0.74
COL4A6-204ENST00000461897 RSG1Q9BU20 258 aa10.41□□□□□ -0.74
COL4A6-204ENST00000461897 WDR61Q9GZS3 305 aaKnown RBP10.41□□□□□ -0.74
COL4A6-204ENST00000461897 CTDSP1Q9GZU7 261 aa10.41□□□□□ -0.74
COL4A6-204ENST00000461897 SDF2L1Q9HCN8 221 aa10.41□□□□□ -0.74
COL4A6-204ENST00000461897 GAR1Q9NY12 217 aaKnown RBP10.41□□□□□ -0.74
COL4A6-204ENST00000461897 ELOVL5Q9NYP7 299 aa10.41□□□□□ -0.74
COL4A6-204ENST00000461897 GNG13Q9P2W3 67 aa10.41□□□□□ -0.74
COL4A6-204ENST00000461897 KALRNO60229 2985 aa10.41□□□□□ -0.74
COL4A6-204ENST00000461897 C16orf97H3BN30 126 aa10.4□□□□□ -0.74
COL4A6-204ENST00000461897 H3BP45 60 aa10.4□□□□□ -0.74
COL4A6-204ENST00000461897 CLDN34H7C241 214 aa10.4□□□□□ -0.74
COL4A6-204ENST00000461897 SLC33A1O00400 549 aaPredicted RBP10.4□□□□□ -0.74
COL4A6-204ENST00000461897 TIMM8AO60220 97 aaPredicted RBP10.4□□□□□ -0.74
COL4A6-204ENST00000461897 CRYAAP02489 173 aa10.4□□□□□ -0.74
COL4A6-204ENST00000461897 CD81P60033 236 aa10.4□□□□□ -0.74
COL4A6-204ENST00000461897 NKX6-1P78426 367 aaPredicted RBP10.4□□□□□ -0.74
COL4A6-204ENST00000461897 POLEQ07864 2286 aa10.4□□□□□ -0.74
COL4A6-204ENST00000461897 ZNF146Q15072 292 aa10.4□□□□□ -0.74
COL4A6-204ENST00000461897 PYY3Q5JQD4 70 aa10.4□□□□□ -0.74
COL4A6-204ENST00000461897 FAM209BQ5JX69 171 aa10.4□□□□□ -0.74
COL4A6-204ENST00000461897 TMEM14EPQ6UXP3 125 aa10.4□□□□□ -0.74
COL4A6-204ENST00000461897 C1orf174Q8IYL3 243 aa10.4□□□□□ -0.74
COL4A6-204ENST00000461897 C1orf87Q8N0U7 546 aa10.4□□□□□ -0.74
COL4A6-204ENST00000461897 SCCPDHQ8NBX0 429 aa10.4□□□□□ -0.74
COL4A6-204ENST00000461897 ZBTB34Q8NCN2 500 aa10.4□□□□□ -0.74
COL4A6-204ENST00000461897 RND1Q92730 232 aa10.4□□□□□ -0.74
COL4A6-204ENST00000461897 ZNF665Q9H7R5 613 aa10.4□□□□□ -0.74
COL4A6-204ENST00000461897 VAX2Q9UIW0 290 aa10.4□□□□□ -0.74
COL4A6-204ENST00000461897 TRGV8A0A0C4DH27 118 aa10.4□□□□□ -0.75
COL4A6-204ENST00000461897 IGHV3-64DA0A0J9YX35 117 aa10.4□□□□□ -0.75
COL4A6-204ENST00000461897 ZNF729A6NN14 1252 aaPredicted RBP10.4□□□□□ -0.75
COL4A6-204ENST00000461897 RNF212BA8MTL3 300 aa10.4□□□□□ -0.75
COL4A6-204ENST00000461897 GATCO43716 136 aaKnown RBP10.4□□□□□ -0.75
COL4A6-204ENST00000461897 P0C879 139 aa10.4□□□□□ -0.75
COL4A6-204ENST00000461897 S100A2P29034 98 aa10.4□□□□□ -0.75
COL4A6-204ENST00000461897 GCH1P30793 250 aa10.4□□□□□ -0.75
COL4A6-204ENST00000461897 CEBPGP53567 150 aa10.4□□□□□ -0.75
COL4A6-204ENST00000461897 NDUFA6P56556 154 aa10.4□□□□□ -0.75
COL4A6-204ENST00000461897 RAB11AP62491 216 aa10.4□□□□□ -0.75
COL4A6-204ENST00000461897 MSMO1Q15800 293 aa10.4□□□□□ -0.75
COL4A6-204ENST00000461897 ST6GALNAC3Q8NDV1 305 aa10.4□□□□□ -0.75
COL4A6-204ENST00000461897 RNASE11Q8TAA1 199 aaKnown RBP10.4□□□□□ -0.75
COL4A6-204ENST00000461897 FAM210BQ96KR6 192 aa10.4□□□□□ -0.75
COL4A6-204ENST00000461897 POLDIP2Q9Y2S7 368 aa10.4□□□□□ -0.75
COL4A6-204ENST00000461897 SMG1Q96Q15 3661 aaKnown RBP10.39□□□□□ -0.75
COL4A6-204ENST00000461897 TRAV20A0A0B4J274 112 aa10.39□□□□□ -0.75
COL4A6-204ENST00000461897 A0A1B0GWJ7 208 aa10.39□□□□□ -0.75
COL4A6-204ENST00000461897 TMEM210A6NLX4 147 aa10.39□□□□□ -0.75
COL4A6-204ENST00000461897 CDIPTO14735 213 aa10.39□□□□□ -0.75
COL4A6-204ENST00000461897 OR2H2O95918 312 aa10.39□□□□□ -0.75
COL4A6-204ENST00000461897 IFNA1P01562 189 aa10.39□□□□□ -0.75
COL4A6-204ENST00000461897 OPN1MWP04001 364 aa10.39□□□□□ -0.75
COL4A6-204ENST00000461897 METTL15P1P0C7V9 234 aa10.39□□□□□ -0.75
COL4A6-204ENST00000461897 OPN1MW2P0DN77 364 aa10.39□□□□□ -0.75
COL4A6-204ENST00000461897 OPN1MW3P0DN78 364 aa10.39□□□□□ -0.75
COL4A6-204ENST00000461897 CA7P43166 264 aa10.39□□□□□ -0.75
COL4A6-204ENST00000461897 IZUMO4Q1ZYL8 232 aa10.39□□□□□ -0.75
COL4A6-204ENST00000461897 SPNS3Q6ZMD2 512 aa10.39□□□□□ -0.75
COL4A6-204ENST00000461897 SSX7Q7RTT5 188 aa10.39□□□□□ -0.75
COL4A6-204ENST00000461897 LRP11Q86VZ4 500 aa10.39□□□□□ -0.75
COL4A6-204ENST00000461897 HIST3H2BBQ8N257 126 aa10.39□□□□□ -0.75
COL4A6-204ENST00000461897 VSIRQ9H7M9 311 aa10.39□□□□□ -0.75
COL4A6-204ENST00000461897 MSL2Q9HCI7 577 aa10.39□□□□□ -0.75
COL4A6-204ENST00000461897 CYB5BO43169 146 aa10.38□□□□□ -0.75
COL4A6-204ENST00000461897 TRGC2P03986 189 aa10.38□□□□□ -0.75
COL4A6-204ENST00000461897 THBDP07204 575 aa10.38□□□□□ -0.75
COL4A6-204ENST00000461897 PGA5P0DJD9 388 aa10.38□□□□□ -0.75
COL4A6-204ENST00000461897 IAPPP10997 89 aa10.38□□□□□ -0.75
COL4A6-204ENST00000461897 CD40P25942 277 aa10.38□□□□□ -0.75
COL4A6-204ENST00000461897 LY6DQ14210 128 aa10.38□□□□□ -0.75
COL4A6-204ENST00000461897 WDR25Q64LD2 544 aaPredicted RBP10.38□□□□□ -0.75
COL4A6-204ENST00000461897 IL1F10Q8WWZ1 152 aa10.38□□□□□ -0.75
COL4A6-204ENST00000461897 TAF15Q92804 592 aaKnown RBP eCLIP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms