RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 RAB25P57735 213 aa7.1□□□□□ -1.27
BRCA1-207ENST00000461798 ZNF616Q08AN1 781 aa7.1□□□□□ -1.27
BRCA1-207ENST00000461798 PLA2G7Q13093 441 aa7.1□□□□□ -1.27
BRCA1-207ENST00000461798 SRSF7Q16629 238 aaKnown RBP eCLIP7.1□□□□□ -1.27
BRCA1-207ENST00000461798 HES5Q5TA89 166 aa7.1□□□□□ -1.27
BRCA1-207ENST00000461798 PYHIN1Q6K0P9 492 aa7.1□□□□□ -1.27
BRCA1-207ENST00000461798 Q6ZS49 121 aa7.1□□□□□ -1.27
BRCA1-207ENST00000461798 ZNF383Q8NA42 475 aa7.1□□□□□ -1.27
BRCA1-207ENST00000461798 OR10R2Q8NGX6 335 aa7.1□□□□□ -1.27
BRCA1-207ENST00000461798 RAB3CQ96E17 227 aa7.1□□□□□ -1.27
BRCA1-207ENST00000461798 TSNAXQ99598 290 aaKnown RBP7.1□□□□□ -1.27
BRCA1-207ENST00000461798 CABLES2Q9BTV7 478 aa7.1□□□□□ -1.27
BRCA1-207ENST00000461798 CENPOQ9BU64 300 aa7.1□□□□□ -1.27
BRCA1-207ENST00000461798 NDUFB11Q9NX14 153 aa7.1□□□□□ -1.27
BRCA1-207ENST00000461798 ZNF221Q9UK13 617 aa7.1□□□□□ -1.27
BRCA1-207ENST00000461798 FOXA2Q9Y261 457 aaPredicted RBP7.1□□□□□ -1.27
BRCA1-207ENST00000461798 MFNGO00587 321 aa7.09□□□□□ -1.27
BRCA1-207ENST00000461798 ARPC1BO15143 372 aaKnown RBP7.09□□□□□ -1.27
BRCA1-207ENST00000461798 BRI3O95415 125 aa7.09□□□□□ -1.27
BRCA1-207ENST00000461798 IGKV1-16P04430 117 aa7.09□□□□□ -1.27
BRCA1-207ENST00000461798 CRYGBP07316 175 aa7.09□□□□□ -1.27
BRCA1-207ENST00000461798 CD3GP09693 182 aa7.09□□□□□ -1.27
BRCA1-207ENST00000461798 LGALS7P47929 136 aa7.09□□□□□ -1.27
BRCA1-207ENST00000461798 OR10A3P58181 314 aa7.09□□□□□ -1.27
BRCA1-207ENST00000461798 LINC00205P59089 165 aa7.09□□□□□ -1.27
BRCA1-207ENST00000461798 GABARAPL2P60520 117 aa7.09□□□□□ -1.27
BRCA1-207ENST00000461798 GNB1P62873 340 aa7.09□□□□□ -1.27
BRCA1-207ENST00000461798 TAGLNQ01995 201 aaKnown RBP7.09□□□□□ -1.27
BRCA1-207ENST00000461798 CD69Q07108 199 aa7.09□□□□□ -1.27
BRCA1-207ENST00000461798 MOGAT2Q3SYC2 334 aa7.09□□□□□ -1.27
BRCA1-207ENST00000461798 UBE2UQ5VVX9 321 aa7.09□□□□□ -1.27
BRCA1-207ENST00000461798 PPP1R27Q86WC6 154 aa7.09□□□□□ -1.27
BRCA1-207ENST00000461798 PDPNQ86YL7 162 aa7.09□□□□□ -1.27
BRCA1-207ENST00000461798 DRAXINQ8NBI3 349 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-207ENST00000461798 FLYWCH2Q96CP2 140 aaKnown RBP7.09□□□□□ -1.27
BRCA1-207ENST00000461798 RHOVQ96L33 236 aa7.09□□□□□ -1.27
BRCA1-207ENST00000461798 CNBD2Q96M20 576 aa7.09□□□□□ -1.27
BRCA1-207ENST00000461798 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.09□□□□□ -1.27
BRCA1-207ENST00000461798 METTL1Q9UBP6 276 aaKnown RBP7.09□□□□□ -1.27
BRCA1-207ENST00000461798 A0A1W2PN81 502 aa7.08□□□□□ -1.28
BRCA1-207ENST00000461798 METTL21EPA6NDL7 271 aa7.08□□□□□ -1.28
BRCA1-207ENST00000461798 IGLV2-23P01705 113 aa7.08□□□□□ -1.28
BRCA1-207ENST00000461798 APOA2P02652 100 aa7.08□□□□□ -1.28
BRCA1-207ENST00000461798 FCGR3AP08637 254 aa7.08□□□□□ -1.28
BRCA1-207ENST00000461798 LGALS1P09382 135 aaKnown RBP7.08□□□□□ -1.28
BRCA1-207ENST00000461798 OR8U9P0C7N5 309 aa7.08□□□□□ -1.28
BRCA1-207ENST00000461798 GSTT2P0CG29 244 aa7.08□□□□□ -1.28
BRCA1-207ENST00000461798 GSTT2BP0CG30 244 aa7.08□□□□□ -1.28
BRCA1-207ENST00000461798 HIST1H1DP16402 221 aaKnown RBP7.08□□□□□ -1.28
BRCA1-207ENST00000461798 RAB3BP20337 219 aa7.08□□□□□ -1.28
BRCA1-207ENST00000461798 GADD45AP24522 165 aa7.08□□□□□ -1.28
BRCA1-207ENST00000461798 FGF9P31371 208 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-207ENST00000461798 CHRNA7P36544 502 aa7.08□□□□□ -1.28
BRCA1-207ENST00000461798 ECI1P42126 302 aa7.08□□□□□ -1.28
BRCA1-207ENST00000461798 RPS16P62249 146 aaKnown RBP7.08□□□□□ -1.28
BRCA1-207ENST00000461798 MRPS15P82914 257 aaKnown RBP7.08□□□□□ -1.28
BRCA1-207ENST00000461798 ARL6IP1Q15041 203 aa7.08□□□□□ -1.28
BRCA1-207ENST00000461798 PLGLAQ15195 96 aa7.08□□□□□ -1.28
BRCA1-207ENST00000461798 ECSCRQ19T08 205 aa7.08□□□□□ -1.28
BRCA1-207ENST00000461798 ZNF260Q3ZCT1 412 aa7.08□□□□□ -1.28
BRCA1-207ENST00000461798 ACTBL2Q562R1 376 aa7.08□□□□□ -1.28
BRCA1-207ENST00000461798 IGSF11Q5DX21 431 aa7.08□□□□□ -1.28
BRCA1-207ENST00000461798 C11orf87Q6NUJ2 197 aa7.08□□□□□ -1.28
BRCA1-207ENST00000461798 ZNF429Q86V71 674 aa7.08□□□□□ -1.28
BRCA1-207ENST00000461798 LFNGQ8NES3 379 aa7.08□□□□□ -1.28
BRCA1-207ENST00000461798 DCUN1D4Q92564 292 aa7.08□□□□□ -1.28
BRCA1-207ENST00000461798 TMEM68Q96MH6 324 aa7.08□□□□□ -1.28
BRCA1-207ENST00000461798 YTHDF1Q9BYJ9 559 aaKnown RBP7.08□□□□□ -1.28
BRCA1-207ENST00000461798 SLA2Q9H6Q3 261 aa7.08□□□□□ -1.28
BRCA1-207ENST00000461798 SDHAF2Q9NX18 166 aa7.08□□□□□ -1.28
BRCA1-207ENST00000461798 ZNF256Q9Y2P7 627 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-207ENST00000461798 LINC01619G3V211 115 aa7.07□□□□□ -1.28
BRCA1-207ENST00000461798 H3BUA1 57 aa7.07□□□□□ -1.28
BRCA1-207ENST00000461798 M0R1X1 148 aa7.07□□□□□ -1.28
BRCA1-207ENST00000461798 OVOL1O14753 267 aa7.07□□□□□ -1.28
BRCA1-207ENST00000461798 CA2P00918 260 aa7.07□□□□□ -1.28
BRCA1-207ENST00000461798 HSPB1P04792 205 aaKnown RBP7.07□□□□□ -1.28
BRCA1-207ENST00000461798 GNB3P16520 340 aa7.07□□□□□ -1.28
BRCA1-207ENST00000461798 DTYMKP23919 212 aa7.07□□□□□ -1.28
BRCA1-207ENST00000461798 MYL9P24844 172 aa7.07□□□□□ -1.28
BRCA1-207ENST00000461798 CD40LGP29965 261 aa7.07□□□□□ -1.28
BRCA1-207ENST00000461798 SSBP2P81877 361 aaPredicted RBP7.07□□□□□ -1.28
BRCA1-207ENST00000461798 FXYD3Q14802 87 aa7.07□□□□□ -1.28
BRCA1-207ENST00000461798 TMEM177Q53S58 311 aa7.07□□□□□ -1.28
BRCA1-207ENST00000461798 LCE1DQ5T752 114 aa7.07□□□□□ -1.28
BRCA1-207ENST00000461798 UNQ5815/PRO19632Q6UWF5 114 aa7.07□□□□□ -1.28
BRCA1-207ENST00000461798 NR2C2APQ86WQ0 139 aa7.07□□□□□ -1.28
BRCA1-207ENST00000461798 SPARTQ8N0X7 666 aa7.07□□□□□ -1.28
BRCA1-207ENST00000461798 OR10J5Q8NHC4 309 aa7.07□□□□□ -1.28
BRCA1-207ENST00000461798 ARPC1AQ92747 370 aa7.07□□□□□ -1.28
BRCA1-207ENST00000461798 DLX4Q92988 240 aaPredicted RBP7.07□□□□□ -1.28
BRCA1-207ENST00000461798 OR5B12Q96R08 314 aa7.07□□□□□ -1.28
BRCA1-207ENST00000461798 PRR25Q96S07 402 aa7.07□□□□□ -1.28
BRCA1-207ENST00000461798 SLC35D1Q9NTN3 355 aa7.07□□□□□ -1.28
BRCA1-207ENST00000461798 TENM3Q9P273 2699 aa7.06□□□□□ -1.28
BRCA1-207ENST00000461798 COL7A1Q02388 2944 aa7.06□□□□□ -1.28
BRCA1-207ENST00000461798 NOTOA8MTQ0 251 aa7.06□□□□□ -1.28
BRCA1-207ENST00000461798 BET1O15155 118 aa7.06□□□□□ -1.28
BRCA1-207ENST00000461798 SLC25A17O43808 307 aa7.06□□□□□ -1.28
BRCA1-207ENST00000461798 CTXN2P0C2S0 81 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms