RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 CRHBPP24387 322 aa1.55□□□□□ -2.16
VCL-203ENST00000461383 RPS24P62847 133 aaKnown RBP1.55□□□□□ -2.16
VCL-203ENST00000461383 MEF2BQ02080 365 aaPredicted RBP1.55□□□□□ -2.16
VCL-203ENST00000461383 GNA12Q03113 381 aa1.55□□□□□ -2.16
VCL-203ENST00000461383 TNFRSF9Q07011 255 aa1.55□□□□□ -2.16
VCL-203ENST00000461383 RSU1Q15404 277 aa1.55□□□□□ -2.16
VCL-203ENST00000461383 BATFQ16520 125 aa1.55□□□□□ -2.16
VCL-203ENST00000461383 TMEM176BQ3YBM2 270 aaPredicted RBP1.55□□□□□ -2.16
VCL-203ENST00000461383 FAM229BQ4G0N7 80 aa1.55□□□□□ -2.16
VCL-203ENST00000461383 COQ5Q5HYK3 327 aa1.55□□□□□ -2.16
VCL-203ENST00000461383 CLVS2Q5SYC1 327 aa1.55□□□□□ -2.16
VCL-203ENST00000461383 TCF24Q7RTU0 167 aa1.55□□□□□ -2.16
VCL-203ENST00000461383 C1orf174Q8IYL3 243 aa1.55□□□□□ -2.16
VCL-203ENST00000461383 LRRC34Q8IZ02 419 aa1.55□□□□□ -2.16
VCL-203ENST00000461383 UBL4BQ8N7F7 174 aa1.55□□□□□ -2.16
VCL-203ENST00000461383 JOSD2Q8TAC2 188 aa1.55□□□□□ -2.16
VCL-203ENST00000461383 FNDC9Q8TBE3 224 aa1.55□□□□□ -2.16
VCL-203ENST00000461383 C16orf78Q8WTQ4 265 aa1.55□□□□□ -2.16
VCL-203ENST00000461383 RNF133Q8WVZ7 376 aa1.55□□□□□ -2.16
VCL-203ENST00000461383 TMA16Q96EY4 203 aaKnown RBP1.55□□□□□ -2.16
VCL-203ENST00000461383 SLC35G5Q96KT7 338 aa1.55□□□□□ -2.16
VCL-203ENST00000461383 C20orf166-AS1Q96NR2 134 aa1.55□□□□□ -2.16
VCL-203ENST00000461383 SPZ1Q9BXG8 430 aa1.55□□□□□ -2.16
VCL-203ENST00000461383 SLC17A3O00476 420 aa1.54□□□□□ -2.16
VCL-203ENST00000461383 TRAPPC3O43617 180 aa1.54□□□□□ -2.16
VCL-203ENST00000461383 HLA-DRAP01903 254 aa1.54□□□□□ -2.16
VCL-203ENST00000461383 ISG15P05161 165 aa1.54□□□□□ -2.16
VCL-203ENST00000461383 CALB1P05937 261 aa1.54□□□□□ -2.16
VCL-203ENST00000461383 MYL12AP19105 171 aa1.54□□□□□ -2.16
VCL-203ENST00000461383 SERPINB10P48595 397 aa1.54□□□□□ -2.16
VCL-203ENST00000461383 CTBP2P56545 445 aa1.54□□□□□ -2.16
VCL-203ENST00000461383 UBE2IP63279 158 aaKnown RBP1.54□□□□□ -2.16
VCL-203ENST00000461383 HOXC5Q00444 222 aa1.54□□□□□ -2.16
VCL-203ENST00000461383 ITGB3BPQ13352 177 aaPredicted RBP1.54□□□□□ -2.16
VCL-203ENST00000461383 UAP1Q16222 522 aaPredicted RBP1.54□□□□□ -2.16
VCL-203ENST00000461383 CCDC122Q5T0U0 273 aa1.54□□□□□ -2.16
VCL-203ENST00000461383 C1orf195Q5TG92 126 aa1.54□□□□□ -2.16
VCL-203ENST00000461383 FAM78BQ5VT40 261 aa1.54□□□□□ -2.16
VCL-203ENST00000461383 C10orf67Q8IYJ2 551 aa1.54□□□□□ -2.16
VCL-203ENST00000461383 TMEM161BQ8NDZ6 487 aa1.54□□□□□ -2.16
VCL-203ENST00000461383 OR4C16Q8NGL9 310 aa1.54□□□□□ -2.16
VCL-203ENST00000461383 HAVCR2Q8TDQ0 301 aa1.54□□□□□ -2.16
VCL-203ENST00000461383 CPNE2Q96FN4 548 aaPredicted RBP1.54□□□□□ -2.16
VCL-203ENST00000461383 OR52B2Q96RD2 323 aa1.54□□□□□ -2.16
VCL-203ENST00000461383 MIEN1Q9BRT3 115 aa1.54□□□□□ -2.16
VCL-203ENST00000461383 UPK3BQ9BT76 320 aa1.54□□□□□ -2.16
VCL-203ENST00000461383 OR51I2Q9H344 312 aa1.54□□□□□ -2.16
VCL-203ENST00000461383 C11orf1Q9H5F2 150 aa1.54□□□□□ -2.16
VCL-203ENST00000461383 C3orf18Q9UK00 162 aa1.54□□□□□ -2.16
VCL-203ENST00000461383 MINOS1-NBL1R4GNA1 71 aa1.54□□□□□ -2.16
VCL-203ENST00000461383 COL18A1P39060 1754 aa1.54□□□□□ -2.16
VCL-203ENST00000461383 COL5A1P20908 1838 aaPredicted RBP1.54□□□□□ -2.16
VCL-203ENST00000461383 TMED7-TICAM2A0A0A6YYA0 188 aa1.53□□□□□ -2.16
VCL-203ENST00000461383 A0A0J9YX75 114 aa1.53□□□□□ -2.16
VCL-203ENST00000461383 C19orf71A6NCJ1 209 aa1.53□□□□□ -2.16
VCL-203ENST00000461383 OR11H12B2RN74 326 aa1.53□□□□□ -2.16
VCL-203ENST00000461383 C21orf140B9A014 251 aa1.53□□□□□ -2.16
VCL-203ENST00000461383 ZNF878C9JN71 531 aa1.53□□□□□ -2.16
VCL-203ENST00000461383 ACOX3O15254 700 aa1.53□□□□□ -2.16
VCL-203ENST00000461383 TGOLN2O43493 480 aa1.53□□□□□ -2.16
VCL-203ENST00000461383 ADCY9O60503 1353 aa1.53□□□□□ -2.16
VCL-203ENST00000461383 E2F6O75461 281 aa1.53□□□□□ -2.16
VCL-203ENST00000461383 AHSA1O95433 338 aa1.53□□□□□ -2.16
VCL-203ENST00000461383 TNNC2P02585 160 aa1.53□□□□□ -2.16
VCL-203ENST00000461383 REG1AP05451 166 aa1.53□□□□□ -2.16
VCL-203ENST00000461383 UCHL3P15374 230 aa1.53□□□□□ -2.16
VCL-203ENST00000461383 ZNF7P17097 686 aaPredicted RBP1.53□□□□□ -2.16
VCL-203ENST00000461383 CCR7P32248 378 aa1.53□□□□□ -2.16
VCL-203ENST00000461383 ANP32AP39687 249 aaKnown RBP1.53□□□□□ -2.16
VCL-203ENST00000461383 TCL1AP56279 114 aa1.53□□□□□ -2.16
VCL-203ENST00000461383 C9orf84Q5VXU9 1444 aa1.53□□□□□ -2.16
VCL-203ENST00000461383 OR10K2Q6IF99 312 aa1.53□□□□□ -2.16
VCL-203ENST00000461383 CD200R1LQ6Q8B3 271 aa1.53□□□□□ -2.16
VCL-203ENST00000461383 EVC2Q86UK5 1308 aa1.53□□□□□ -2.16
VCL-203ENST00000461383 GID4Q8IVV7 300 aa1.53□□□□□ -2.16
VCL-203ENST00000461383 DAND5Q8N907 189 aa1.53□□□□□ -2.16
VCL-203ENST00000461383 OR11H2Q8NH07 326 aa1.53□□□□□ -2.16
VCL-203ENST00000461383 PHOSPHO2Q8TCD6 241 aa1.53□□□□□ -2.16
VCL-203ENST00000461383 RPS4Y2Q8TD47 263 aa1.53□□□□□ -2.16
VCL-203ENST00000461383 FAM96AQ9H5X1 160 aa1.53□□□□□ -2.16
VCL-203ENST00000461383 NYNRINQ9P2P1 1898 aaKnown RBP1.53□□□□□ -2.16
VCL-203ENST00000461383 THSD7AQ9UPZ6 1657 aa1.53□□□□□ -2.16
VCL-203ENST00000461383 MMACHCQ9Y4U1 282 aa1.53□□□□□ -2.16
VCL-203ENST00000461383 LSM5Q9Y4Y9 91 aaKnown RBP1.53□□□□□ -2.16
VCL-203ENST00000461383 OR6C6A6NF89 314 aa1.52□□□□□ -2.17
VCL-203ENST00000461383 C17orf51A8MQB3 221 aa1.52□□□□□ -2.17
VCL-203ENST00000461383 C3orf84H3BNL1 204 aa1.52□□□□□ -2.17
VCL-203ENST00000461383 H3BPC8 53 aa1.52□□□□□ -2.17
VCL-203ENST00000461383 M0R036 132 aa1.52□□□□□ -2.17
VCL-203ENST00000461383 TXNDC9O14530 226 aa1.52□□□□□ -2.17
VCL-203ENST00000461383 DCTN3O75935 186 aa1.52□□□□□ -2.17
VCL-203ENST00000461383 IGHV1-69P01742 117 aa1.52□□□□□ -2.17
VCL-203ENST00000461383 GZMBP10144 247 aa1.52□□□□□ -2.17
VCL-203ENST00000461383 CRYBB3P26998 211 aa1.52□□□□□ -2.17
VCL-203ENST00000461383 CEBPGP53567 150 aa1.52□□□□□ -2.17
VCL-203ENST00000461383 PLPPR5Q32ZL2 321 aa1.52□□□□□ -2.17
VCL-203ENST00000461383 SBSNQ6UWP8 590 aa1.52□□□□□ -2.17
VCL-203ENST00000461383 C5orf46Q6UWT4 87 aa1.52□□□□□ -2.17
VCL-203ENST00000461383 GLT6D1Q7Z4J2 308 aa1.52□□□□□ -2.17
VCL-203ENST00000461383 OR13C8Q8NGS7 320 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms