RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 ZNF525Q8N782 197 aa16.73■□□□□ 0.27
CCM2-203ENST00000461377 VSTM5A8MXK1 200 aa16.72■□□□□ 0.27
CCM2-203ENST00000461377 M0R1X1 148 aa16.72■□□□□ 0.27
CCM2-203ENST00000461377 DNASE2O00115 360 aaPredicted RBP16.72■□□□□ 0.27
CCM2-203ENST00000461377 SLC31A2O15432 143 aa16.72■□□□□ 0.27
CCM2-203ENST00000461377 SFTA3P0C7M3 94 aa16.72■□□□□ 0.27
CCM2-203ENST00000461377 RAB7AP51149 207 aa16.72■□□□□ 0.27
CCM2-203ENST00000461377 CASP6P55212 293 aa16.72■□□□□ 0.27
CCM2-203ENST00000461377 SPANXN5Q5MJ07 72 aa16.72■□□□□ 0.27
CCM2-203ENST00000461377 TMEM14EPQ6UXP3 125 aa16.72■□□□□ 0.27
CCM2-203ENST00000461377 ZCCHC24Q8N2G6 241 aaKnown RBP16.72■□□□□ 0.27
CCM2-203ENST00000461377 CORO2AQ92828 525 aa16.72■□□□□ 0.27
CCM2-203ENST00000461377 LINC00574Q9H8X3 128 aa16.72■□□□□ 0.27
CCM2-203ENST00000461377 DSCAMO60469 2012 aa16.72■□□□□ 0.27
CCM2-203ENST00000461377 PLCE1Q9P212 2302 aa16.72■□□□□ 0.27
CCM2-203ENST00000461377 CACNA1DQ01668 2161 aa16.72■□□□□ 0.27
CCM2-203ENST00000461377 MED19A0JLT2 244 aaPredicted RBP16.71■□□□□ 0.27
CCM2-203ENST00000461377 CA7P43166 264 aa16.71■□□□□ 0.27
CCM2-203ENST00000461377 HBG1P69891 147 aa16.71■□□□□ 0.27
CCM2-203ENST00000461377 HBG2P69892 147 aa16.71■□□□□ 0.27
CCM2-203ENST00000461377 RPL39P5Q59GN2 51 aa16.71■□□□□ 0.27
CCM2-203ENST00000461377 UTF1Q5T230 341 aa16.71■□□□□ 0.27
CCM2-203ENST00000461377 R3HDM4Q96D70 268 aa16.71■□□□□ 0.27
CCM2-203ENST00000461377 ABHD14AQ9BUJ0 271 aa16.71■□□□□ 0.27
CCM2-203ENST00000461377 EGLN1Q9GZT9 426 aa16.71■□□□□ 0.27
CCM2-203ENST00000461377 NKX6-3A6NJ46 265 aa16.71■□□□□ 0.27
CCM2-203ENST00000461377 ZNF729A6NN14 1252 aaPredicted RBP16.71■□□□□ 0.27
CCM2-203ENST00000461377 MARCH11A6NNE9 402 aa16.71■□□□□ 0.27
CCM2-203ENST00000461377 RBFOX2O43251 390 aaKnown RBP eCLIP16.71■□□□□ 0.275e-6■■■■■ 29.4
CCM2-203ENST00000461377 HPRT1P00492 218 aa16.71■□□□□ 0.27
CCM2-203ENST00000461377 IGHV3-7P01780 117 aa16.71■□□□□ 0.27
CCM2-203ENST00000461377 KLRB1Q12918 225 aa16.71■□□□□ 0.27
CCM2-203ENST00000461377 LFNGQ8NES3 379 aa16.71■□□□□ 0.27
CCM2-203ENST00000461377 SAP30LQ9HAJ7 183 aa16.71■□□□□ 0.27
CCM2-203ENST00000461377 RAI1Q7Z5J4 1906 aaPredicted RBP16.71■□□□□ 0.26
CCM2-203ENST00000461377 MAP1BP46821 2468 aaKnown RBP16.7■□□□□ 0.26
CCM2-203ENST00000461377 E7EQL1 145 aa16.7■□□□□ 0.26
CCM2-203ENST00000461377 FCGR3BO75015 233 aa16.7■□□□□ 0.26
CCM2-203ENST00000461377 GUK1Q16774 197 aa16.7■□□□□ 0.26
CCM2-203ENST00000461377 CT45A1Q5HYN5 189 aa16.7■□□□□ 0.26
CCM2-203ENST00000461377 KDF1Q8NAX2 398 aaPredicted RBP16.7■□□□□ 0.26
CCM2-203ENST00000461377 CT45A3Q8NHU0 189 aa16.7■□□□□ 0.26
CCM2-203ENST00000461377 IDI2-AS1Q9NZ38 188 aa16.7■□□□□ 0.26
CCM2-203ENST00000461377 DYSFO75923 2080 aa16.7■□□□□ 0.26
CCM2-203ENST00000461377 TRAV38-1A0A0B4J264 116 aa16.69■□□□□ 0.26
CCM2-203ENST00000461377 PPIHO43447 177 aaKnown RBP16.69■□□□□ 0.26
CCM2-203ENST00000461377 TMEM30BQ3MIR4 351 aa16.69■□□□□ 0.26
CCM2-203ENST00000461377 SLC25A24Q6NUK1 477 aa16.69■□□□□ 0.26
CCM2-203ENST00000461377 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.69■□□□□ 0.26
CCM2-203ENST00000461377 ZNF439Q8NDP4 499 aa16.69■□□□□ 0.26
CCM2-203ENST00000461377 RNASE6Q93091 150 aaKnown RBP16.69■□□□□ 0.26
CCM2-203ENST00000461377 LEAP2Q969E1 77 aa16.69■□□□□ 0.26
CCM2-203ENST00000461377 TMEM178BH3BS89 294 aa16.69■□□□□ 0.26
CCM2-203ENST00000461377 KIR2DS2P43631 304 aa16.69■□□□□ 0.26
CCM2-203ENST00000461377 PEA15Q15121 130 aa16.69■□□□□ 0.26
CCM2-203ENST00000461377 AKR1C8PQ5T2L2 129 aa16.69■□□□□ 0.26
CCM2-203ENST00000461377 C1orf229Q6ZS94 237 aaPredicted RBP16.69■□□□□ 0.26
CCM2-203ENST00000461377 THNSL2Q86YJ6 484 aa16.69■□□□□ 0.26
CCM2-203ENST00000461377 C1orf87Q8N0U7 546 aa16.69■□□□□ 0.26
CCM2-203ENST00000461377 ST6GALNAC3Q8NDV1 305 aa16.69■□□□□ 0.26
CCM2-203ENST00000461377 DDB2Q92466 427 aa16.69■□□□□ 0.26
CCM2-203ENST00000461377 OR4C12Q96R67 309 aa16.69■□□□□ 0.26
CCM2-203ENST00000461377 PARD6GQ9BYG4 376 aaPredicted RBP16.69■□□□□ 0.26
CCM2-203ENST00000461377 FAM74A7A6NL05 159 aa16.68■□□□□ 0.26
CCM2-203ENST00000461377 FAM90A9PA6NNJ1 464 aa16.68■□□□□ 0.26
CCM2-203ENST00000461377 OR8U8P0C7N1 319 aa16.68■□□□□ 0.26
CCM2-203ENST00000461377 AARDQ4LEZ3 155 aa16.68■□□□□ 0.26
CCM2-203ENST00000461377 FAM74A3Q4VXF1 159 aa16.68■□□□□ 0.26
CCM2-203ENST00000461377 SPSB3Q6PJ21 355 aa16.68■□□□□ 0.26
CCM2-203ENST00000461377 DPPA3Q6W0C5 159 aa16.68■□□□□ 0.26
CCM2-203ENST00000461377 LILRB2Q8N423 598 aa16.68■□□□□ 0.26
CCM2-203ENST00000461377 SCGB1C1Q8TD33 95 aa16.68■□□□□ 0.26
CCM2-203ENST00000461377 DTD1Q8TEA8 209 aa16.68■□□□□ 0.26
CCM2-203ENST00000461377 NEUROG1Q92886 237 aa16.68■□□□□ 0.26
CCM2-203ENST00000461377 PRELID3BQ9Y3B1 194 aa16.68■□□□□ 0.26
CCM2-203ENST00000461377 A0A1B0GW64 132 aa16.68■□□□□ 0.26
CCM2-203ENST00000461377 TMPRSS2O15393 492 aa16.68■□□□□ 0.26
CCM2-203ENST00000461377 F12P00748 615 aaPredicted RBP16.68■□□□□ 0.26
CCM2-203ENST00000461377 OR9G9P0C7N8 305 aa16.68■□□□□ 0.26
CCM2-203ENST00000461377 SLC38A11Q08AI6 406 aa16.68■□□□□ 0.26
CCM2-203ENST00000461377 LRRC75BQ2VPJ9 315 aa16.68■□□□□ 0.26
CCM2-203ENST00000461377 FBXL19-AS1Q494R0 122 aa16.68■□□□□ 0.26
CCM2-203ENST00000461377 SP5Q6BEB4 398 aaPredicted RBP16.68■□□□□ 0.26
CCM2-203ENST00000461377 CIB3Q96Q77 187 aaPredicted RBP16.68■□□□□ 0.26
CCM2-203ENST00000461377 USF3Q68DE3 2245 aa16.67■□□□□ 0.26
CCM2-203ENST00000461377 PPIAL4EA0A075B759 164 aa16.67■□□□□ 0.26
CCM2-203ENST00000461377 hADV38S2A0JD32 116 aa16.67■□□□□ 0.26
CCM2-203ENST00000461377 PPIAL4DF5H284 164 aa16.67■□□□□ 0.26
CCM2-203ENST00000461377 TSPAN4O14817 238 aa16.67■□□□□ 0.26
CCM2-203ENST00000461377 NUPL2O15504 423 aaKnown RBP16.67■□□□□ 0.26
CCM2-203ENST00000461377 ZG16O60844 167 aa16.67■□□□□ 0.26
CCM2-203ENST00000461377 SNAPINO95295 136 aa16.67■□□□□ 0.26
CCM2-203ENST00000461377 PPIAL4FP0DN26 164 aa16.67■□□□□ 0.26
CCM2-203ENST00000461377 S1PR3Q99500 378 aa16.67■□□□□ 0.26
CCM2-203ENST00000461377 ZNF251Q9BRH9 671 aa16.67■□□□□ 0.26
CCM2-203ENST00000461377 PSMG3Q9BT73 122 aaPredicted RBP16.67■□□□□ 0.26
CCM2-203ENST00000461377 PBDC1Q9BVG4 233 aa16.67■□□□□ 0.26
CCM2-203ENST00000461377 HIPK2Q9H2X6 1198 aa16.67■□□□□ 0.26
CCM2-203ENST00000461377 FBXO7Q9Y3I1 522 aa16.67■□□□□ 0.26
CCM2-203ENST00000461377 PPIAL4AQ9Y536 164 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms