RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 FOXJ2Q9P0K8 574 aa7.76□□□□□ -1.17
SHROOM4-203ENST00000460112 PEF1Q9UBV8 284 aaKnown RBP7.76□□□□□ -1.17
SHROOM4-203ENST00000460112 CKS2P33552 79 aa7.76□□□□□ -1.17
SHROOM4-203ENST00000460112 IER3P46695 156 aa7.76□□□□□ -1.17
SHROOM4-203ENST00000460112 GGTLC2Q14390 218 aa7.76□□□□□ -1.17
SHROOM4-203ENST00000460112 IRF3Q14653 427 aa7.76□□□□□ -1.17
SHROOM4-203ENST00000460112 MMD2Q8IY49 270 aa7.76□□□□□ -1.17
SHROOM4-203ENST00000460112 TMEM45BQ96B21 275 aa7.76□□□□□ -1.17
SHROOM4-203ENST00000460112 DUX5Q96PT3 197 aa7.76□□□□□ -1.17
SHROOM4-203ENST00000460112 CSPG4Q6UVK1 2322 aa7.76□□□□□ -1.17
SHROOM4-203ENST00000460112 NPFFO15130 113 aa7.76□□□□□ -1.17
SHROOM4-203ENST00000460112 KBTBD11O94819 623 aa7.76□□□□□ -1.17
SHROOM4-203ENST00000460112 MAGEA5P43359 124 aa7.76□□□□□ -1.17
SHROOM4-203ENST00000460112 NUBP1P53384 320 aa7.76□□□□□ -1.17
SHROOM4-203ENST00000460112 ADAMTS17Q8TE56 1095 aa7.76□□□□□ -1.17
SHROOM4-203ENST00000460112 LSM10Q969L4 123 aaKnown RBP7.76□□□□□ -1.17
SHROOM4-203ENST00000460112 RNASE1P07998 156 aaKnown RBP7.76□□□□□ -1.17
SHROOM4-203ENST00000460112 HOXB1P14653 301 aaPredicted RBP7.76□□□□□ -1.17
SHROOM4-203ENST00000460112 LINC01559Q495D7 138 aa7.76□□□□□ -1.17
SHROOM4-203ENST00000460112 MRPL54Q6P161 138 aaKnown RBP7.76□□□□□ -1.17
SHROOM4-203ENST00000460112 TCF24Q7RTU0 167 aa7.76□□□□□ -1.17
SHROOM4-203ENST00000460112 HIST1H4GQ99525 98 aa7.76□□□□□ -1.17
SHROOM4-203ENST00000460112 ZNF815PA8K554 130 aa7.75□□□□□ -1.17
SHROOM4-203ENST00000460112 CEACAM18A8MTB9 384 aa7.75□□□□□ -1.17
SHROOM4-203ENST00000460112 RIPPLY2Q5TAB7 128 aa7.75□□□□□ -1.17
SHROOM4-203ENST00000460112 ZNF645Q8N7E2 425 aa7.75□□□□□ -1.17
SHROOM4-203ENST00000460112 LOXL4Q96JB6 756 aa7.75□□□□□ -1.17
SHROOM4-203ENST00000460112 SNURFLB1AK76 121 aa7.75□□□□□ -1.17
SHROOM4-203ENST00000460112 H0Y980 276 aa7.75□□□□□ -1.17
SHROOM4-203ENST00000460112 J3KRW8 73 aa7.75□□□□□ -1.17
SHROOM4-203ENST00000460112 NGFRP08138 427 aa7.75□□□□□ -1.17
SHROOM4-203ENST00000460112 PRDX2P32119 198 aa7.75□□□□□ -1.17
SHROOM4-203ENST00000460112 TMEM50BP56557 158 aa7.75□□□□□ -1.17
SHROOM4-203ENST00000460112 KLF9Q13886 244 aaPredicted RBP7.75□□□□□ -1.17
SHROOM4-203ENST00000460112 NKG7Q16617 165 aa7.75□□□□□ -1.17
SHROOM4-203ENST00000460112 AQP10Q96PS8 301 aa7.75□□□□□ -1.17
SHROOM4-203ENST00000460112 FUT9Q9Y231 359 aa7.75□□□□□ -1.17
SHROOM4-203ENST00000460112 IGHV1OR15-9A0A0B4J2B8 117 aa7.75□□□□□ -1.17
SHROOM4-203ENST00000460112 HSPB1P04792 205 aaKnown RBP7.75□□□□□ -1.17
SHROOM4-203ENST00000460112 CCL19Q99731 98 aa7.75□□□□□ -1.17
SHROOM4-203ENST00000460112 TCL1AP56279 114 aa7.75□□□□□ -1.17
SHROOM4-203ENST00000460112 PCGF1Q9BSM1 259 aa7.75□□□□□ -1.17
SHROOM4-203ENST00000460112 TNFSF18Q9UNG2 199 aa7.75□□□□□ -1.17
SHROOM4-203ENST00000460112 WIPI2Q9Y4P8 454 aa7.75□□□□□ -1.17
SHROOM4-203ENST00000460112 PTPN13Q12923 2485 aa7.75□□□□□ -1.17
SHROOM4-203ENST00000460112 RECKO95980 971 aa7.75□□□□□ -1.17
SHROOM4-203ENST00000460112 CTLA4P16410 223 aa7.75□□□□□ -1.17
SHROOM4-203ENST00000460112 TMEM136Q6ZRR5 245 aa7.75□□□□□ -1.17
SHROOM4-203ENST00000460112 GGACTQ9BVM4 153 aa7.75□□□□□ -1.17
SHROOM4-203ENST00000460112 FSCN3Q9NQT6 498 aa7.75□□□□□ -1.17
SHROOM4-203ENST00000460112 CACNA1AO00555 2505 aa7.75□□□□□ -1.17
SHROOM4-203ENST00000460112 SHISA8B8ZZ34 492 aa7.75□□□□□ -1.17
SHROOM4-203ENST00000460112 BCL2P10415 239 aa7.75□□□□□ -1.17
SHROOM4-203ENST00000460112 LIFP15018 202 aa7.75□□□□□ -1.17
SHROOM4-203ENST00000460112 TMEM179BQ7Z7N9 219 aa7.75□□□□□ -1.17
SHROOM4-203ENST00000460112 EEF1AKMT3Q96AZ1 226 aa7.75□□□□□ -1.17
SHROOM4-203ENST00000460112 RASL10BQ96S79 203 aa7.75□□□□□ -1.17
SHROOM4-203ENST00000460112 NCOR1P1Q9H4R4 102 aa7.75□□□□□ -1.17
SHROOM4-203ENST00000460112 NPVFQ9HCQ7 196 aa7.75□□□□□ -1.17
SHROOM4-203ENST00000460112 PRR14LQ5THK1 2151 aa7.75□□□□□ -1.17
SHROOM4-203ENST00000460112 CDIPTO14735 213 aa7.75□□□□□ -1.17
SHROOM4-203ENST00000460112 LINC01565O15544 149 aa7.75□□□□□ -1.17
SHROOM4-203ENST00000460112 KIAA0040Q15053 153 aa7.75□□□□□ -1.17
SHROOM4-203ENST00000460112 RNFT1Q5M7Z0 435 aa7.75□□□□□ -1.17
SHROOM4-203ENST00000460112 PCSK4Q6UW60 755 aa7.75□□□□□ -1.17
SHROOM4-203ENST00000460112 DCTN5Q9BTE1 182 aa7.75□□□□□ -1.17
SHROOM4-203ENST00000460112 MEIG1Q5JSS6 88 aa7.74□□□□□ -1.17
SHROOM4-203ENST00000460112 CLEC18BQ6UXF7 455 aa7.74□□□□□ -1.17
SHROOM4-203ENST00000460112 VSTM2LQ96N03 204 aa7.74□□□□□ -1.17
SHROOM4-203ENST00000460112 FOXD3Q9UJU5 478 aaPredicted RBP7.74□□□□□ -1.17
SHROOM4-203ENST00000460112 FNDC1Q4ZHG4 1894 aaPredicted RBP7.74□□□□□ -1.17
SHROOM4-203ENST00000460112 RPS4XP62701 263 aaKnown RBP7.74□□□□□ -1.17
SHROOM4-203ENST00000460112 RPL8P62917 257 aaKnown RBP7.74□□□□□ -1.17
SHROOM4-203ENST00000460112 WFDC3Q8IUB2 231 aa7.74□□□□□ -1.17
SHROOM4-203ENST00000460112 OR10AC1Q8NH08 325 aa7.74□□□□□ -1.17
SHROOM4-203ENST00000460112 KCNE5Q9UJ90 142 aa7.74□□□□□ -1.17
SHROOM4-203ENST00000460112 C7orf77A4D0Y5 90 aa7.74□□□□□ -1.17
SHROOM4-203ENST00000460112 GPR82Q96P67 336 aa7.74□□□□□ -1.17
SHROOM4-203ENST00000460112 ZNF430Q9H8G1 570 aaPredicted RBP7.74□□□□□ -1.17
SHROOM4-203ENST00000460112 TRBV5-3A0A0A0MS03 114 aa7.74□□□□□ -1.17
SHROOM4-203ENST00000460112 CCL2P13500 99 aa7.74□□□□□ -1.17
SHROOM4-203ENST00000460112 PLPPR5Q32ZL2 321 aa7.74□□□□□ -1.17
SHROOM4-203ENST00000460112 ZNF784Q8NCA9 323 aaPredicted RBP7.74□□□□□ -1.17
SHROOM4-203ENST00000460112 RPL27AP46776 148 aaKnown RBP7.74□□□□□ -1.17
SHROOM4-203ENST00000460112 RAE1P78406 368 aaKnown RBP7.74□□□□□ -1.17
SHROOM4-203ENST00000460112 GUCD1Q96NT3 240 aa7.74□□□□□ -1.17
SHROOM4-203ENST00000460112 TREM2Q9NZC2 230 aa7.74□□□□□ -1.17
SHROOM4-203ENST00000460112 DENND4AQ7Z401 1863 aa7.74□□□□□ -1.17
SHROOM4-203ENST00000460112 ANKHD1Q8IWZ3 2542 aaKnown RBP7.74□□□□□ -1.17
SHROOM4-203ENST00000460112 H3BMH7 237 aa7.74□□□□□ -1.17
SHROOM4-203ENST00000460112 MFAP4P55083 255 aa7.74□□□□□ -1.17
SHROOM4-203ENST00000460112 COL10A1Q03692 680 aa7.74□□□□□ -1.17
SHROOM4-203ENST00000460112 LDLRAD3Q86YD5 345 aa7.74□□□□□ -1.17
SHROOM4-203ENST00000460112 LRRC75AQ8NAA5 344 aa7.74□□□□□ -1.17
SHROOM4-203ENST00000460112 DUSP15Q9H1R2 295 aaPredicted RBP7.74□□□□□ -1.17
SHROOM4-203ENST00000460112 KIF26AQ9ULI4 1882 aaPredicted RBP7.74□□□□□ -1.17
SHROOM4-203ENST00000460112 LOC107984156A0A0G2JMH3 177 aa7.74□□□□□ -1.17
SHROOM4-203ENST00000460112 MGST3O14880 152 aa7.74□□□□□ -1.17
SHROOM4-203ENST00000460112 ANOS1P23352 680 aa7.74□□□□□ -1.17
SHROOM4-203ENST00000460112 EWSR1Q01844 656 aaKnown RBP eCLIP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms