RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 CXCL3P19876 107 aa2.87□□□□□ -1.95
CCDC50-203ENST00000460064 HIST1H1TP22492 207 aaPredicted RBP2.87□□□□□ -1.95
CCDC50-203ENST00000460064 S100GP29377 79 aa2.87□□□□□ -1.95
CCDC50-203ENST00000460064 S100A7P31151 101 aa2.87□□□□□ -1.95
CCDC50-203ENST00000460064 CDC42P60953 191 aa2.87□□□□□ -1.95
CCDC50-203ENST00000460064 PRDX1Q06830 199 aaKnown RBP2.87□□□□□ -1.95
CCDC50-203ENST00000460064 RSU1Q15404 277 aa2.87□□□□□ -1.95
CCDC50-203ENST00000460064 IGFBP7Q16270 282 aa2.87□□□□□ -1.95
CCDC50-203ENST00000460064 TMEM241Q24JQ0 296 aa2.87□□□□□ -1.95
CCDC50-203ENST00000460064 FAM78BQ5VT40 261 aa2.87□□□□□ -1.95
CCDC50-203ENST00000460064 ZFAND6Q6FIF0 208 aa2.87□□□□□ -1.95
CCDC50-203ENST00000460064 FAM183BPQ6ZVS7 135 aa2.87□□□□□ -1.95
CCDC50-203ENST00000460064 CALHM3Q86XJ0 350 aa2.87□□□□□ -1.95
CCDC50-203ENST00000460064 UBL4BQ8N7F7 174 aa2.87□□□□□ -1.95
CCDC50-203ENST00000460064 OR2K2Q8NGT1 345 aa2.87□□□□□ -1.95
CCDC50-203ENST00000460064 GRPEL2Q8TAA5 225 aa2.87□□□□□ -1.95
CCDC50-203ENST00000460064 CD200R1Q8TD46 325 aa2.87□□□□□ -1.95
CCDC50-203ENST00000460064 C2orf15Q8WU43 125 aaKnown RBP2.87□□□□□ -1.95
CCDC50-203ENST00000460064 TWIST2Q8WVJ9 160 aa2.87□□□□□ -1.95
CCDC50-203ENST00000460064 CCL17Q92583 94 aa2.87□□□□□ -1.95
CCDC50-203ENST00000460064 TAMM41Q96BW9 452 aa2.87□□□□□ -1.95
CCDC50-203ENST00000460064 C12orf43Q96C57 262 aaKnown RBP2.87□□□□□ -1.95
CCDC50-203ENST00000460064 BTF3L4Q96K17 158 aa2.87□□□□□ -1.95
CCDC50-203ENST00000460064 GINS3Q9BRX5 216 aa2.87□□□□□ -1.95
CCDC50-203ENST00000460064 C2orf88Q9BSF0 95 aa2.87□□□□□ -1.95
CCDC50-203ENST00000460064 FAAP24Q9BTP7 215 aa2.87□□□□□ -1.95
CCDC50-203ENST00000460064 ZNF436Q9C0F3 470 aaPredicted RBP2.87□□□□□ -1.95
CCDC50-203ENST00000460064 OR51E2Q9H255 320 aa2.87□□□□□ -1.95
CCDC50-203ENST00000460064 NMNAT1Q9HAN9 279 aaPredicted RBP2.87□□□□□ -1.95
CCDC50-203ENST00000460064 TAS2R1Q9NYW7 299 aa2.87□□□□□ -1.95
CCDC50-203ENST00000460064 SS18L2Q9UHA2 77 aa2.87□□□□□ -1.95
CCDC50-203ENST00000460064 POLR1DQ9Y2S0 133 aa2.87□□□□□ -1.95
CCDC50-203ENST00000460064 CARHSP1Q9Y2V2 147 aaKnown RBP2.87□□□□□ -1.95
CCDC50-203ENST00000460064 FAM32AQ9Y421 112 aaKnown RBP2.87□□□□□ -1.95
CCDC50-203ENST00000460064 HSPB11Q9Y547 144 aa2.87□□□□□ -1.95
CCDC50-203ENST00000460064 PLXNB3Q9ULL4 1909 aa2.87□□□□□ -1.95
CCDC50-203ENST00000460064 ZBED9Q6R2W3 1325 aa2.87□□□□□ -1.95
CCDC50-203ENST00000460064 TAF1LQ8IZX4 1826 aa2.86□□□□□ -1.95
CCDC50-203ENST00000460064 DYSFO75923 2080 aa2.86□□□□□ -1.95
CCDC50-203ENST00000460064 BAZ1BQ9UIG0 1483 aaKnown RBP2.86□□□□□ -1.95
CCDC50-203ENST00000460064 PGPA6NDG6 321 aa2.86□□□□□ -1.95
CCDC50-203ENST00000460064 H3BP45 60 aa2.86□□□□□ -1.95
CCDC50-203ENST00000460064 MFSD11O43934 449 aa2.86□□□□□ -1.95
CCDC50-203ENST00000460064 STK16O75716 305 aa2.86□□□□□ -1.95
CCDC50-203ENST00000460064 ATG12O94817 140 aa2.86□□□□□ -1.95
CCDC50-203ENST00000460064 IGHG2P01859 326 aa2.86□□□□□ -1.95
CCDC50-203ENST00000460064 CXCL2P19875 107 aa2.86□□□□□ -1.95
CCDC50-203ENST00000460064 AKR1C3P42330 323 aa2.86□□□□□ -1.95
CCDC50-203ENST00000460064 OR1E2P47887 323 aa2.86□□□□□ -1.95
CCDC50-203ENST00000460064 LGALS7P47929 136 aa2.86□□□□□ -1.95
CCDC50-203ENST00000460064 RAB5BP61020 215 aa2.86□□□□□ -1.95
CCDC50-203ENST00000460064 DYNLL1P63167 89 aaKnown RBP2.86□□□□□ -1.95
CCDC50-203ENST00000460064 IHHQ14623 411 aa2.86□□□□□ -1.95
CCDC50-203ENST00000460064 CDK10Q15131 360 aa2.86□□□□□ -1.95
CCDC50-203ENST00000460064 ACOT6Q3I5F7 207 aaPredicted RBP2.86□□□□□ -1.95
CCDC50-203ENST00000460064 GLYATQ6IB77 296 aa2.86□□□□□ -1.95
CCDC50-203ENST00000460064 SMARCD3Q6STE5 483 aa2.86□□□□□ -1.95
CCDC50-203ENST00000460064 ALKAL1Q6UXT8 129 aa2.86□□□□□ -1.95
CCDC50-203ENST00000460064 AMN1Q8IY45 258 aa2.86□□□□□ -1.95
CCDC50-203ENST00000460064 OR8S1Q8NH09 359 aa2.86□□□□□ -1.95
CCDC50-203ENST00000460064 LHFPL5Q8TAF8 219 aa2.86□□□□□ -1.95
CCDC50-203ENST00000460064 LINC01587Q99440 93 aa2.86□□□□□ -1.95
CCDC50-203ENST00000460064 CMSS1Q9BQ75 279 aaKnown RBP2.86□□□□□ -1.95
CCDC50-203ENST00000460064 KIFC1Q9BW19 673 aa2.86□□□□□ -1.95
CCDC50-203ENST00000460064 PLA2G12AQ9BZM1 189 aa2.86□□□□□ -1.95
CCDC50-203ENST00000460064 LRTM1Q9HBL6 345 aa2.86□□□□□ -1.95
CCDC50-203ENST00000460064 DOK5Q9P104 306 aa2.86□□□□□ -1.95
CCDC50-203ENST00000460064 ZNF492Q9P255 531 aa2.86□□□□□ -1.95
CCDC50-203ENST00000460064 ANGPT4Q9Y264 503 aa2.86□□□□□ -1.95
CCDC50-203ENST00000460064 VWA8A3KMH1 1905 aa2.85□□□□□ -1.95
CCDC50-203ENST00000460064 ERCC6Q03468 1493 aa2.85□□□□□ -1.95
CCDC50-203ENST00000460064 WDR7Q9Y4E6 1490 aa2.85□□□□□ -1.95
CCDC50-203ENST00000460064 K7EP13 123 aa2.85□□□□□ -1.95
CCDC50-203ENST00000460064 ISLRO14498 428 aa2.85□□□□□ -1.95
CCDC50-203ENST00000460064 ORC5O43913 435 aa2.85□□□□□ -1.95
CCDC50-203ENST00000460064 IL3P08700 152 aa2.85□□□□□ -1.95
CCDC50-203ENST00000460064 CECR9P0C854 216 aa2.85□□□□□ -1.95
CCDC50-203ENST00000460064 OR13C7P0DN81 318 aa2.85□□□□□ -1.95
CCDC50-203ENST00000460064 TCTAP57738 103 aa2.85□□□□□ -1.95
CCDC50-203ENST00000460064 RAB2AP61019 212 aa2.85□□□□□ -1.95
CCDC50-203ENST00000460064 RHOBP62745 196 aa2.85□□□□□ -1.95
CCDC50-203ENST00000460064 HIST1H3AP68431 136 aa2.85□□□□□ -1.95
CCDC50-203ENST00000460064 H3F3AP84243 136 aa2.85□□□□□ -1.95
CCDC50-203ENST00000460064 ENDOGQ14249 297 aaKnown RBP2.85□□□□□ -1.95
CCDC50-203ENST00000460064 SURF2Q15527 256 aaPredicted RBP2.85□□□□□ -1.95
CCDC50-203ENST00000460064 TMEM128Q5BJH2 165 aa2.85□□□□□ -1.95
CCDC50-203ENST00000460064 LDLRAD2Q5SZI1 272 aa2.85□□□□□ -1.95
CCDC50-203ENST00000460064 TMEM78Q5T7P6 136 aa2.85□□□□□ -1.95
CCDC50-203ENST00000460064 LAMTOR1Q6IAA8 161 aa2.85□□□□□ -1.95
CCDC50-203ENST00000460064 C4orf22Q6V702 233 aa2.85□□□□□ -1.95
CCDC50-203ENST00000460064 C3orf62Q6ZUJ4 267 aa2.85□□□□□ -1.95
CCDC50-203ENST00000460064 HIST2H3AQ71DI3 136 aa2.85□□□□□ -1.95
CCDC50-203ENST00000460064 GRINAQ7Z429 371 aa2.85□□□□□ -1.95
CCDC50-203ENST00000460064 ZBTB8OSQ8IWT0 167 aa2.85□□□□□ -1.95
CCDC50-203ENST00000460064 ZNF567Q8N184 647 aa2.85□□□□□ -1.95
CCDC50-203ENST00000460064 C1orf158Q8N1D5 194 aa2.85□□□□□ -1.95
CCDC50-203ENST00000460064 OR13C6PQ8NH95 151 aa2.85□□□□□ -1.95
CCDC50-203ENST00000460064 OR52B2Q96RD2 323 aa2.85□□□□□ -1.95
CCDC50-203ENST00000460064 MROQ9BYG7 248 aa2.85□□□□□ -1.95
CCDC50-203ENST00000460064 BTRCQ9Y297 605 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms