RNA–Protein interactions for RNA: ENST00000459927.5

GPNMB-204, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-204ENST00000459927 SLC25A17O43808 307 aa9.38□□□□□ -0.91
GPNMB-204ENST00000459927 BPNT1O95861 308 aa9.38□□□□□ -0.91
GPNMB-204ENST00000459927 IGLV2-23P01705 113 aa9.38□□□□□ -0.91
GPNMB-204ENST00000459927 SYNJ2BPP57105 145 aa9.38□□□□□ -0.91
GPNMB-204ENST00000459927 ZNF343Q6P1L6 599 aa9.38□□□□□ -0.91
GPNMB-204ENST00000459927 LINC00322Q6ZN03 302 aaPredicted RBP9.38□□□□□ -0.91
GPNMB-204ENST00000459927 MOB1BQ7L9L4 216 aa9.38□□□□□ -0.91
GPNMB-204ENST00000459927 CEACAM19Q7Z692 300 aa9.38□□□□□ -0.91
GPNMB-204ENST00000459927 PDPNQ86YL7 162 aa9.38□□□□□ -0.91
GPNMB-204ENST00000459927 GRPEL2Q8TAA5 225 aa9.38□□□□□ -0.91
GPNMB-204ENST00000459927 HDHD3Q9BSH5 251 aaPredicted RBP9.38□□□□□ -0.91
GPNMB-204ENST00000459927 TMED9Q9BVK6 235 aa9.38□□□□□ -0.91
GPNMB-204ENST00000459927 TINAGL1Q9GZM7 467 aaPredicted RBP9.38□□□□□ -0.91
GPNMB-204ENST00000459927 LPAR5Q9H1C0 372 aa9.38□□□□□ -0.91
GPNMB-204ENST00000459927 KCNK15Q9H427 330 aa9.38□□□□□ -0.91
GPNMB-204ENST00000459927 NKX1-2Q9UD57 310 aaPredicted RBP9.38□□□□□ -0.91
GPNMB-204ENST00000459927 HSF4Q9ULV5 492 aa9.38□□□□□ -0.91
GPNMB-204ENST00000459927 MGAT4AQ9UM21 535 aa9.38□□□□□ -0.91
GPNMB-204ENST00000459927 PLECQ15149 4684 aaKnown RBP9.37□□□□□ -0.91
GPNMB-204ENST00000459927 IGKV1-6A0A0C4DH72 117 aa9.37□□□□□ -0.91
GPNMB-204ENST00000459927 IZUMO1RA6ND01 250 aa9.37□□□□□ -0.91
GPNMB-204ENST00000459927 SRRM4A7MD48 611 aaKnown RBP9.37□□□□□ -0.91
GPNMB-204ENST00000459927 AADACP22760 399 aa9.37□□□□□ -0.91
GPNMB-204ENST00000459927 BPIFB6Q8NFQ5 453 aa9.37□□□□□ -0.91
GPNMB-204ENST00000459927 USMG5Q96IX5 58 aa9.37□□□□□ -0.91
GPNMB-204ENST00000459927 ADAM30Q9UKF2 790 aa9.37□□□□□ -0.91
GPNMB-204ENST00000459927 MSGN1A6NI15 193 aa9.36□□□□□ -0.91
GPNMB-204ENST00000459927 FOXI3A8MTJ6 420 aaPredicted RBP9.36□□□□□ -0.91
GPNMB-204ENST00000459927 TRDCB7Z8K6 153 aa9.36□□□□□ -0.91
GPNMB-204ENST00000459927 MYL12BO14950 172 aa9.36□□□□□ -0.91
GPNMB-204ENST00000459927 TRBV12-3P01733 135 aa9.36□□□□□ -0.91
GPNMB-204ENST00000459927 APOA2P02652 100 aa9.36□□□□□ -0.91
GPNMB-204ENST00000459927 GNAO1P09471 354 aa9.36□□□□□ -0.91
GPNMB-204ENST00000459927 HLA-DRB3P79483 266 aa9.36□□□□□ -0.91
GPNMB-204ENST00000459927 MRGPRG-AS1Q2M3A8 158 aa9.36□□□□□ -0.91
GPNMB-204ENST00000459927 RBM48Q5RL73 367 aaKnown RBP9.36□□□□□ -0.91
GPNMB-204ENST00000459927 RNLSQ5VYX0 342 aa9.36□□□□□ -0.91
GPNMB-204ENST00000459927 AHSA2Q719I0 299 aa9.36□□□□□ -0.91
GPNMB-204ENST00000459927 GTSCR1Q86UQ5 136 aa9.36□□□□□ -0.91
GPNMB-204ENST00000459927 IL17DQ8TAD2 202 aa9.36□□□□□ -0.91
GPNMB-204ENST00000459927 FBLIM1Q8WUP2 373 aa9.36□□□□□ -0.91
GPNMB-204ENST00000459927 URM1Q9BTM9 101 aaKnown RBP9.36□□□□□ -0.91
GPNMB-204ENST00000459927 HIPK2Q9H2X6 1198 aa9.36□□□□□ -0.91
GPNMB-204ENST00000459927 SLC35D1Q9NTN3 355 aa9.36□□□□□ -0.91
GPNMB-204ENST00000459927 FKBP14Q9NWM8 211 aa9.36□□□□□ -0.91
GPNMB-204ENST00000459927 RDH8Q9NYR8 311 aa9.36□□□□□ -0.91
GPNMB-204ENST00000459927 ZNF785A8K8V0 405 aa9.35□□□□□ -0.91
GPNMB-204ENST00000459927 M0R1X1 148 aa9.35□□□□□ -0.91
GPNMB-204ENST00000459927 RBMXL2O75526 392 aaKnown RBP9.35□□□□□ -0.91
GPNMB-204ENST00000459927 DYRK1AQ13627 763 aa9.35□□□□□ -0.91
GPNMB-204ENST00000459927 HSD17B12Q53GQ0 312 aa9.35□□□□□ -0.91
GPNMB-204ENST00000459927 LCN12Q6JVE5 192 aa9.35□□□□□ -0.91
GPNMB-204ENST00000459927 Q8N402 240 aa9.35□□□□□ -0.91
GPNMB-204ENST00000459927 PACRGLQ8N7B6 248 aa9.35□□□□□ -0.91
GPNMB-204ENST00000459927 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.35□□□□□ -0.91
GPNMB-204ENST00000459927 BVESQ8NE79 360 aa9.35□□□□□ -0.91
GPNMB-204ENST00000459927 OR6M1Q8NGM8 313 aa9.35□□□□□ -0.91
GPNMB-204ENST00000459927 SNAPC3Q92966 411 aa9.35□□□□□ -0.91
GPNMB-204ENST00000459927 ARHGAP5-AS1Q96IT6 56 aa9.35□□□□□ -0.91
GPNMB-204ENST00000459927 CMSS1Q9BQ75 279 aaKnown RBP9.35□□□□□ -0.91
GPNMB-204ENST00000459927 PECRQ9BY49 303 aa9.35□□□□□ -0.91
GPNMB-204ENST00000459927 C8orf4Q9NR00 106 aa9.35□□□□□ -0.91
GPNMB-204ENST00000459927 SHISA3A0PJX4 238 aa9.34□□□□□ -0.91
GPNMB-204ENST00000459927 UCHL1P09936 223 aa9.34□□□□□ -0.91
GPNMB-204ENST00000459927 TAGLNQ01995 201 aaKnown RBP9.34□□□□□ -0.91
GPNMB-204ENST00000459927 P2RY14Q15391 338 aa9.34□□□□□ -0.91
GPNMB-204ENST00000459927 RPEL1Q2QD12 228 aa9.34□□□□□ -0.91
GPNMB-204ENST00000459927 C2orf76Q3KRA6 126 aa9.34□□□□□ -0.91
GPNMB-204ENST00000459927 TMEM177Q53S58 311 aa9.34□□□□□ -0.91
GPNMB-204ENST00000459927 C8orf59Q8N0T1 100 aaPredicted RBP9.34□□□□□ -0.91
GPNMB-204ENST00000459927 OR2K2Q8NGT1 345 aa9.34□□□□□ -0.91
GPNMB-204ENST00000459927 GFI1Q99684 422 aa9.34□□□□□ -0.91
GPNMB-204ENST00000459927 SDHAF2Q9NX18 166 aa9.34□□□□□ -0.91
GPNMB-204ENST00000459927 RBMY1BA6NDE4 496 aaKnown RBP9.33□□□□□ -0.92
GPNMB-204ENST00000459927 RBMY1EA6NEQ0 496 aaKnown RBP9.33□□□□□ -0.92
GPNMB-204ENST00000459927 PTGES3LE9PB15 166 aa9.33□□□□□ -0.92
GPNMB-204ENST00000459927 SLC17A2O00624 439 aa9.33□□□□□ -0.92
GPNMB-204ENST00000459927 SHOXO15266 292 aa9.33□□□□□ -0.92
GPNMB-204ENST00000459927 AIREO43918 545 aa9.33□□□□□ -0.92
GPNMB-204ENST00000459927 OR2A4O95047 310 aa9.33□□□□□ -0.92
GPNMB-204ENST00000459927 CDK1P06493 297 aa9.33□□□□□ -0.92
GPNMB-204ENST00000459927 CD3GP09693 182 aa9.33□□□□□ -0.92
GPNMB-204ENST00000459927 RBMY1DP0C7P1 496 aaKnown RBP9.33□□□□□ -0.92
GPNMB-204ENST00000459927 GSTT2P0CG29 244 aa9.33□□□□□ -0.92
GPNMB-204ENST00000459927 GSTT2BP0CG30 244 aa9.33□□□□□ -0.92
GPNMB-204ENST00000459927 SERPINB10P48595 397 aa9.33□□□□□ -0.92
GPNMB-204ENST00000459927 DEFA5Q01523 94 aa9.33□□□□□ -0.92
GPNMB-204ENST00000459927 SPHARQ15513 63 aa9.33□□□□□ -0.92
GPNMB-204ENST00000459927 PLAC9Q5JTB6 97 aa9.33□□□□□ -0.92
GPNMB-204ENST00000459927 TMEM91Q6ZNR0 172 aa9.33□□□□□ -0.92
GPNMB-204ENST00000459927 TEX45Q8NA69 505 aa9.33□□□□□ -0.92
GPNMB-204ENST00000459927 ADAD2Q8NCV1 583 aaKnown RBP9.33□□□□□ -0.92
GPNMB-204ENST00000459927 OR4A4PQ8NGN8 299 aa9.33□□□□□ -0.92
GPNMB-204ENST00000459927 RETNQ9HD89 108 aa9.33□□□□□ -0.92
GPNMB-204ENST00000459927 C12orf4Q9NQ89 552 aa9.33□□□□□ -0.92
GPNMB-204ENST00000459927 COA4Q9NYJ1 87 aa9.33□□□□□ -0.92
GPNMB-204ENST00000459927 PEMTQ9UBM1 199 aa9.33□□□□□ -0.92
GPNMB-204ENST00000459927 AK6Q9Y3D8 172 aaKnown RBP9.33□□□□□ -0.92
GPNMB-204ENST00000459927 CEPT1Q9Y6K0 416 aa9.33□□□□□ -0.92
GPNMB-204ENST00000459927 JTBO76095 146 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms