RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 SULT1C2O00338 296 aa17.21■□□□□ 0.35
SSNA1-202ENST00000459860 TUSC2O75896 110 aa17.21■□□□□ 0.35
SSNA1-202ENST00000459860 RRASP10301 218 aa17.21■□□□□ 0.35
SSNA1-202ENST00000459860 CNTFRP26992 372 aa17.21■□□□□ 0.35
SSNA1-202ENST00000459860 SLC35B1P78383 322 aa17.21■□□□□ 0.35
SSNA1-202ENST00000459860 NPBQ8NG41 125 aa17.21■□□□□ 0.35
SSNA1-202ENST00000459860 OR5H2Q8NGV7 314 aa17.21■□□□□ 0.35
SSNA1-202ENST00000459860 GPX8Q8TED1 209 aa17.21■□□□□ 0.35
SSNA1-202ENST00000459860 FLYWCH2Q96CP2 140 aaKnown RBP17.21■□□□□ 0.35
SSNA1-202ENST00000459860 TSNAXQ99598 290 aaKnown RBP17.21■□□□□ 0.35
SSNA1-202ENST00000459860 EHFQ9NZC4 300 aa17.21■□□□□ 0.35
SSNA1-202ENST00000459860 ZNF107Q9UII5 783 aaPredicted RBP17.21■□□□□ 0.35
SSNA1-202ENST00000459860 TPPPO94811 219 aa17.2■□□□□ 0.34
SSNA1-202ENST00000459860 NDUFA3O95167 84 aa17.2■□□□□ 0.34
SSNA1-202ENST00000459860 CD28P10747 220 aa17.2■□□□□ 0.34
SSNA1-202ENST00000459860 RCVRNP35243 200 aa17.2■□□□□ 0.34
SSNA1-202ENST00000459860 HERV-K104P61576 105 aa17.2■□□□□ 0.34
SSNA1-202ENST00000459860 RPS16P62249 146 aaKnown RBP17.2■□□□□ 0.34
SSNA1-202ENST00000459860 C5orf64Q2M2E5 130 aa17.2■□□□□ 0.34
SSNA1-202ENST00000459860 RITA1Q96K30 269 aa17.2■□□□□ 0.34
SSNA1-202ENST00000459860 GON7Q9BXV9 100 aa17.2■□□□□ 0.34
SSNA1-202ENST00000459860 C6orf62Q9GZU0 229 aaPredicted RBP17.2■□□□□ 0.34
SSNA1-202ENST00000459860 RRHO14718 337 aa17.19■□□□□ 0.34
SSNA1-202ENST00000459860 SPDEFO95238 335 aa17.19■□□□□ 0.34
SSNA1-202ENST00000459860 PPYP01298 95 aa17.19■□□□□ 0.34
SSNA1-202ENST00000459860 NAT1P18440 290 aa17.19■□□□□ 0.34
SSNA1-202ENST00000459860 AADACP22760 399 aa17.19■□□□□ 0.34
SSNA1-202ENST00000459860 DUTP33316 252 aaKnown RBP17.19■□□□□ 0.34
SSNA1-202ENST00000459860 LINC00205P59089 165 aa17.19■□□□□ 0.34
SSNA1-202ENST00000459860 LIN54Q6MZP7 749 aa17.19■□□□□ 0.34
SSNA1-202ENST00000459860 KCTD9Q7L273 389 aa17.19■□□□□ 0.34
SSNA1-202ENST00000459860 LAX1Q8IWV1 398 aa17.19■□□□□ 0.34
SSNA1-202ENST00000459860 WIPF2Q8TF74 440 aaPredicted RBP17.19■□□□□ 0.34
SSNA1-202ENST00000459860 SECTM1Q8WVN6 248 aa17.19■□□□□ 0.34
SSNA1-202ENST00000459860 C5orf30Q96GV9 206 aa17.19■□□□□ 0.34
SSNA1-202ENST00000459860 RSL24D1Q9UHA3 163 aaKnown RBP17.19■□□□□ 0.34
SSNA1-202ENST00000459860 RBMX2Q9Y388 322 aaKnown RBP17.19■□□□□ 0.34
SSNA1-202ENST00000459860 PRELID3BQ9Y3B1 194 aa17.19■□□□□ 0.34
SSNA1-202ENST00000459860 PRKDCP78527 4128 aaKnown RBP17.19■□□□□ 0.34
SSNA1-202ENST00000459860 IGKV1D-13A0A0B4J2D9 117 aa17.18■□□□□ 0.34
SSNA1-202ENST00000459860 CTDSP2O14595 271 aa17.18■□□□□ 0.34
SSNA1-202ENST00000459860 HLA-DRB1P01911 266 aa17.18■□□□□ 0.34
SSNA1-202ENST00000459860 IGKV1-16P04430 117 aa17.18■□□□□ 0.34
SSNA1-202ENST00000459860 CSF1P09603 554 aa17.18■□□□□ 0.34
SSNA1-202ENST00000459860 IGKV1-13P0DP09 117 aa17.18■□□□□ 0.34
SSNA1-202ENST00000459860 FXYD4P59646 89 aa17.18■□□□□ 0.34
SSNA1-202ENST00000459860 STPG2Q8N412 459 aa17.18■□□□□ 0.34
SSNA1-202ENST00000459860 BVESQ8NE79 360 aa17.18■□□□□ 0.34
SSNA1-202ENST00000459860 GIMAP1Q8WWP7 306 aa17.18■□□□□ 0.34
SSNA1-202ENST00000459860 NOL4LQ96MY1 436 aaPredicted RBP17.18■□□□□ 0.34
SSNA1-202ENST00000459860 HSPB9Q9BQS6 159 aa17.18■□□□□ 0.34
SSNA1-202ENST00000459860 MIXL1Q9H2W2 232 aa17.18■□□□□ 0.34
SSNA1-202ENST00000459860 PMP2P02689 132 aa17.17■□□□□ 0.34
SSNA1-202ENST00000459860 OPN1MWP04001 364 aa17.17■□□□□ 0.34
SSNA1-202ENST00000459860 OPN1MW2P0DN77 364 aa17.17■□□□□ 0.34
SSNA1-202ENST00000459860 OPN1MW3P0DN78 364 aa17.17■□□□□ 0.34
SSNA1-202ENST00000459860 HLA-DMAP28067 261 aa17.17■□□□□ 0.34
SSNA1-202ENST00000459860 DYRK1AQ13627 763 aa17.17■□□□□ 0.34
SSNA1-202ENST00000459860 RNASE12Q5GAN4 147 aaKnown RBP17.17■□□□□ 0.34
SSNA1-202ENST00000459860 OVCH2Q7RTZ1 564 aa17.17■□□□□ 0.34
SSNA1-202ENST00000459860 MCFD2Q8NI22 146 aa17.17■□□□□ 0.34
SSNA1-202ENST00000459860 BORCS5Q969J3 196 aa17.17■□□□□ 0.34
SSNA1-202ENST00000459860 HARBI1Q96MB7 349 aa17.17■□□□□ 0.34
SSNA1-202ENST00000459860 HSD17B10Q99714 261 aaKnown RBP17.17■□□□□ 0.34
SSNA1-202ENST00000459860 SLC5A7Q9GZV3 580 aa17.17■□□□□ 0.34
SSNA1-202ENST00000459860 FBXL15Q9H469 300 aa17.17■□□□□ 0.34
SSNA1-202ENST00000459860 RABL2AQ9UBK7 228 aaPredicted RBP17.17■□□□□ 0.34
SSNA1-202ENST00000459860 METTL1Q9UBP6 276 aaKnown RBP17.17■□□□□ 0.34
SSNA1-202ENST00000459860 LINC00527Q9UJ94 153 aa17.17■□□□□ 0.34
SSNA1-202ENST00000459860 RABL2BQ9UNT1 228 aa17.17■□□□□ 0.34
SSNA1-202ENST00000459860 VWFP04275 2813 aa17.16■□□□□ 0.34
SSNA1-202ENST00000459860 TGP01266 2768 aa17.16■□□□□ 0.34
SSNA1-202ENST00000459860 SHOXO15266 292 aa17.16■□□□□ 0.34
SSNA1-202ENST00000459860 VDAC1P21796 283 aa17.16■□□□□ 0.34
SSNA1-202ENST00000459860 HRH1P35367 487 aa17.16■□□□□ 0.34
SSNA1-202ENST00000459860 LGALS7P47929 136 aa17.16■□□□□ 0.34
SSNA1-202ENST00000459860 RFX2P48378 723 aa17.16■□□□□ 0.34
SSNA1-202ENST00000459860 MRPS10P82664 201 aaKnown RBP17.16■□□□□ 0.34
SSNA1-202ENST00000459860 PSG5Q15238 335 aa17.16■□□□□ 0.34
SSNA1-202ENST00000459860 MSMO1Q15800 293 aa17.16■□□□□ 0.34
SSNA1-202ENST00000459860 NSUN5P1Q3KNT7 163 aa17.16■□□□□ 0.34
SSNA1-202ENST00000459860 ACTBL2Q562R1 376 aa17.16■□□□□ 0.34
SSNA1-202ENST00000459860 KHDC1LQ5JSQ8 128 aa17.16■□□□□ 0.34
SSNA1-202ENST00000459860 TMEM17Q86X19 198 aa17.16■□□□□ 0.34
SSNA1-202ENST00000459860 NDUFA11Q86Y39 141 aa17.16■□□□□ 0.34
SSNA1-202ENST00000459860 ZBTB34Q8NCN2 500 aa17.16■□□□□ 0.34
SSNA1-202ENST00000459860 DIRAS2Q96HU8 199 aa17.16■□□□□ 0.34
SSNA1-202ENST00000459860 CITED2Q99967 270 aaPredicted RBP17.16■□□□□ 0.34
SSNA1-202ENST00000459860 ZNF2Q9BSG1 426 aaPredicted RBP17.16■□□□□ 0.34
SSNA1-202ENST00000459860 SLIRPQ9GZT3 109 aaKnown RBP17.16■□□□□ 0.34
SSNA1-202ENST00000459860 TCRBV4S1A1TA0A5B7 111 aa17.15■□□□□ 0.34
SSNA1-202ENST00000459860 LINC01548A6NM66 108 aa17.15■□□□□ 0.34
SSNA1-202ENST00000459860 LINC00473A8K010 186 aa17.15■□□□□ 0.34
SSNA1-202ENST00000459860 ZNF701M0R085 212 aaPredicted RBP17.15■□□□□ 0.34
SSNA1-202ENST00000459860 TMEM177Q53S58 311 aa17.15■□□□□ 0.34
SSNA1-202ENST00000459860 ZNF66Q6ZN08 573 aa17.15■□□□□ 0.34
SSNA1-202ENST00000459860 COMMD1Q8N668 190 aa17.15■□□□□ 0.34
SSNA1-202ENST00000459860 OR6F1Q8NGZ6 308 aa17.15■□□□□ 0.34
SSNA1-202ENST00000459860 TCTEX1D2Q8WW35 142 aa17.15■□□□□ 0.34
SSNA1-202ENST00000459860 FCAMRQ8WWV6 532 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms