RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 TSNAXQ99598 290 aaKnown RBP4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 C1RLQ9NZP8 487 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 DPM3Q9P2X0 92 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 WASHC3Q9Y3C0 194 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 TBL2Q9Y4P3 447 aaKnown RBP4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 LSM5Q9Y4Y9 91 aaKnown RBP4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 MMP24Q9Y5R2 645 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 AUP1Q9Y679 476 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 MINOS1-NBL1R4GNA1 71 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 TMEM56-RWDD3S4R434 201 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 FAM208BQ5VWN6 2430 aa4.8□□□□□ -1.64
RNU1-88P-201ENST00000459274 USF3Q68DE3 2245 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 A0A087X0M5 115 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 BORCS7-ASMTA0A0B4J1R7 106 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 A0A1B0GW55 424 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 A0A1B0GX30 115 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 A0A1W2PPE3 182 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 A0A1W2PPR1 153 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 KANTRA0A1W2PQU2 76 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 BTBD17A6NE02 478 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 A8MV72 311 aaPredicted RBP4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 A8MXK9 166 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 E5RGE8 158 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 F5H0A9 414 aaPredicted RBP4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 BUB1B-PAK6H3BSN5 160 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 J3QLI3 93 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 CCSO14618 274 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 OR2A4O95047 310 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 SIX6O95475 246 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 CRYZL1O95825 349 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 TGFAP01135 160 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 FGF2P09038 288 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 FAM106CPP0CH98 169 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 DUX4L2P0CJ85 424 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 DUX4L3P0CJ86 424 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 DUX4L4P0CJ87 422 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 DUX4L5P0CJ88 424 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 DUX4L6P0CJ89 424 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 DUX4L7P0CJ90 424 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 RNF224P0DH78 156 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 HNF1AP20823 631 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 DUTP33316 252 aaKnown RBP4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 UBE2E1P51965 193 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 SUB1P53999 127 aaKnown RBP eCLIP4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 SRSF1Q07955 248 aaKnown RBP eCLIP4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 HLA-DRB5Q30154 266 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 ANKRD55Q3KP44 614 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 OR2B11Q5JQS5 317 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 Q5PR19 223 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 CYB5R2Q6BCY4 276 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 EIF5AL1Q6IS14 154 aaKnown RBP4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 C11orf87Q6NUJ2 197 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 SLC25A24Q6NUK1 477 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 DUX4L9Q6RFH8 374 aaPredicted RBP4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 LYZL2Q7Z4W2 148 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 VMO1Q7Z5L0 202 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 STX12Q86Y82 276 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 LDLRAD3Q86YD5 345 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 SELENOHQ8IZQ5 122 aaKnown RBP4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 ZNF295-AS1Q8N0V1 137 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 OR8H3Q8N146 312 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 FGFRL1Q8N441 504 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 DRAXINQ8NBI3 349 aaPredicted RBP4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 LY6G5BQ8NDX9 201 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 OR11H7Q8NGC8 314 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 DCUN1D4Q92564 292 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 TMEM230Q96A57 120 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 MALSU1Q96EH3 234 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 OR2A7Q96R45 310 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 RAB40CQ96S21 281 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 TP53RKQ96S44 253 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 RNF5Q99942 180 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 NEURL2Q9BR09 285 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 ZNF251Q9BRH9 671 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 AGMATQ9BSE5 352 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 KRTAP4-2Q9BYR5 136 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 COMMD5Q9GZQ3 224 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 MFFQ9GZY8 342 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 C7orf69Q9H7B7 122 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 SIRT7Q9NRC8 400 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 DUX4Q9UBX2 424 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 PAIP2BQ9ULR5 123 aaKnown RBP4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 NSG2Q9Y328 171 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 CELSR3Q9NYQ7 3312 aa4.79□□□□□ -1.64
RNU1-88P-201ENST00000459274 A0A0B4J293 547 aa4.78□□□□□ -1.64
RNU1-88P-201ENST00000459274 MARCH11A6NNE9 402 aa4.78□□□□□ -1.64
RNU1-88P-201ENST00000459274 FAM90A9PA6NNJ1 464 aa4.78□□□□□ -1.64
RNU1-88P-201ENST00000459274 CEBPZOSA8MTT3 80 aa4.78□□□□□ -1.64
RNU1-88P-201ENST00000459274 FAM90A26D6RGX4 464 aa4.78□□□□□ -1.64
RNU1-88P-201ENST00000459274 K7EPK0 472 aa4.78□□□□□ -1.64
RNU1-88P-201ENST00000459274 TAAR5O14804 337 aa4.78□□□□□ -1.64
RNU1-88P-201ENST00000459274 ARPC5O15511 151 aa4.78□□□□□ -1.64
RNU1-88P-201ENST00000459274 TSC22D2O75157 780 aa4.78□□□□□ -1.64
RNU1-88P-201ENST00000459274 ADAP1O75689 374 aa4.78□□□□□ -1.64
RNU1-88P-201ENST00000459274 SNRNP70P08621 437 aaKnown RBP4.78□□□□□ -1.64
RNU1-88P-201ENST00000459274 MMP9P14780 707 aa4.78□□□□□ -1.64
RNU1-88P-201ENST00000459274 CXCL3P19876 107 aa4.78□□□□□ -1.64
RNU1-88P-201ENST00000459274 G6PCP35575 357 aa4.78□□□□□ -1.64
RNU1-88P-201ENST00000459274 SNCAP37840 140 aa4.78□□□□□ -1.64
RNU1-88P-201ENST00000459274 RAB14P61106 215 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms