RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 C8orf31Q8N9H6 132 aa7.36□□□□□ -1.23
VPS50-207ENST00000458530 INO80EQ8NBZ0 244 aaPredicted RBP7.36□□□□□ -1.23
VPS50-207ENST00000458530 C8orf46Q8TAG6 207 aa7.36□□□□□ -1.23
VPS50-207ENST00000458530 PPP1R1CQ8WVI7 109 aa7.36□□□□□ -1.23
VPS50-207ENST00000458530 TCTEX1D2Q8WW35 142 aa7.36□□□□□ -1.23
VPS50-207ENST00000458530 RRNAD1Q96FB5 475 aaKnown RBP7.36□□□□□ -1.23
VPS50-207ENST00000458530 S1PR3Q99500 378 aa7.36□□□□□ -1.23
VPS50-207ENST00000458530 PRELID3BQ9Y3B1 194 aa7.36□□□□□ -1.23
VPS50-207ENST00000458530 HSPB11Q9Y547 144 aa7.36□□□□□ -1.23
VPS50-207ENST00000458530 USF3Q68DE3 2245 aa7.36□□□□□ -1.23
VPS50-207ENST00000458530 A0A0D9SG52 128 aa7.35□□□□□ -1.23
VPS50-207ENST00000458530 F5H0A9 414 aaPredicted RBP7.35□□□□□ -1.23
VPS50-207ENST00000458530 LYNX1G3V0Z9 82 aa7.35□□□□□ -1.23
VPS50-207ENST00000458530 LIPFP07098 398 aa7.35□□□□□ -1.23
VPS50-207ENST00000458530 LYNX1P0DP58 116 aa7.35□□□□□ -1.23
VPS50-207ENST00000458530 THBS3P49746 956 aa7.35□□□□□ -1.23
VPS50-207ENST00000458530 AKR1C2P52895 323 aa7.35□□□□□ -1.23
VPS50-207ENST00000458530 TAGLNQ01995 201 aaKnown RBP7.35□□□□□ -1.23
VPS50-207ENST00000458530 ZNF345Q14585 488 aa7.35□□□□□ -1.23
VPS50-207ENST00000458530 ZNF273Q14593 569 aa7.35□□□□□ -1.23
VPS50-207ENST00000458530 AVPI1Q5T686 147 aa7.35□□□□□ -1.23
VPS50-207ENST00000458530 PRAMEF5Q5TYX0 476 aa7.35□□□□□ -1.23
VPS50-207ENST00000458530 WDR25Q64LD2 544 aaPredicted RBP7.35□□□□□ -1.23
VPS50-207ENST00000458530 TMEM200BQ69YZ2 307 aa7.35□□□□□ -1.23
VPS50-207ENST00000458530 FAM71F2Q6NXP2 309 aa7.35□□□□□ -1.23
VPS50-207ENST00000458530 TMEM65Q6PI78 240 aa7.35□□□□□ -1.23
VPS50-207ENST00000458530 PRSS57Q6UWY2 283 aa7.35□□□□□ -1.23
VPS50-207ENST00000458530 SLC25A48Q6ZT89 311 aaKnown RBP7.35□□□□□ -1.23
VPS50-207ENST00000458530 SELENOHQ8IZQ5 122 aaKnown RBP7.35□□□□□ -1.23
VPS50-207ENST00000458530 LRRC75A-AS1Q8N1F1 130 aa7.35□□□□□ -1.23
VPS50-207ENST00000458530 C9orf62Q8N4C0 152 aa7.35□□□□□ -1.23
VPS50-207ENST00000458530 SLC35G3Q8N808 338 aa7.35□□□□□ -1.23
VPS50-207ENST00000458530 ZBTB8BQ8NAP8 495 aaPredicted RBP7.35□□□□□ -1.23
VPS50-207ENST00000458530 TNFRSF14Q92956 283 aa7.35□□□□□ -1.23
VPS50-207ENST00000458530 LSM10Q969L4 123 aaKnown RBP7.35□□□□□ -1.23
VPS50-207ENST00000458530 SEC22AQ96IW7 307 aa7.35□□□□□ -1.23
VPS50-207ENST00000458530 SSBP3Q9BWW4 388 aaPredicted RBP7.35□□□□□ -1.23
VPS50-207ENST00000458530 GON7Q9BXV9 100 aa7.35□□□□□ -1.23
VPS50-207ENST00000458530 PARP12Q9H0J9 701 aaKnown RBP7.35□□□□□ -1.23
VPS50-207ENST00000458530 SLA2Q9H6Q3 261 aa7.35□□□□□ -1.23
VPS50-207ENST00000458530 PATZ1Q9HBE1 687 aaKnown RBP7.35□□□□□ -1.23
VPS50-207ENST00000458530 SDHAF2Q9NX18 166 aa7.35□□□□□ -1.23
VPS50-207ENST00000458530 GSKIPQ9P0R6 139 aa7.35□□□□□ -1.23
VPS50-207ENST00000458530 CACFD1Q9UGQ2 172 aa7.35□□□□□ -1.23
VPS50-207ENST00000458530 RNF150Q9ULK6 438 aa7.35□□□□□ -1.23
VPS50-207ENST00000458530 SESN1Q9Y6P5 492 aa7.35□□□□□ -1.23
VPS50-207ENST00000458530 ANK3Q12955 4377 aaKnown RBP7.34□□□□□ -1.23
VPS50-207ENST00000458530 CUBNO60494 3623 aa7.34□□□□□ -1.23
VPS50-207ENST00000458530 A0A1B0GU03 582 aa7.34□□□□□ -1.23
VPS50-207ENST00000458530 INAFM1C9JVW0 142 aa7.34□□□□□ -1.23
VPS50-207ENST00000458530 G3V3Q6 166 aa7.34□□□□□ -1.23
VPS50-207ENST00000458530 M0R1X1 148 aa7.34□□□□□ -1.23
VPS50-207ENST00000458530 NDUFS8O00217 210 aa7.34□□□□□ -1.23
VPS50-207ENST00000458530 RBFOX2O43251 390 aaKnown RBP eCLIP7.34□□□□□ -1.23
VPS50-207ENST00000458530 OR2F2O95006 317 aa7.34□□□□□ -1.23
VPS50-207ENST00000458530 MPC2O95563 127 aa7.34□□□□□ -1.23
VPS50-207ENST00000458530 IGLV2-14P01704 120 aa7.34□□□□□ -1.23
VPS50-207ENST00000458530 PVALBP20472 110 aaPredicted RBP7.34□□□□□ -1.23
VPS50-207ENST00000458530 OMGP23515 440 aa7.34□□□□□ -1.23
VPS50-207ENST00000458530 ERVFRD-1P60508 538 aa7.34□□□□□ -1.23
VPS50-207ENST00000458530 S100A10P60903 97 aa7.34□□□□□ -1.23
VPS50-207ENST00000458530 ERVK-16P61578 105 aa7.34□□□□□ -1.23
VPS50-207ENST00000458530 OR2F1Q13607 317 aa7.34□□□□□ -1.23
VPS50-207ENST00000458530 LRRC37A5PQ49AS3 106 aa7.34□□□□□ -1.23
VPS50-207ENST00000458530 PRSS54Q6PEW0 395 aa7.34□□□□□ -1.23
VPS50-207ENST00000458530 LYZL2Q7Z4W2 148 aa7.34□□□□□ -1.23
VPS50-207ENST00000458530 ZNF546Q86UE3 836 aa7.34□□□□□ -1.23
VPS50-207ENST00000458530 LYG1Q8N1E2 194 aa7.34□□□□□ -1.23
VPS50-207ENST00000458530 LINC00311Q8N616 119 aa7.34□□□□□ -1.23
VPS50-207ENST00000458530 OR4S2Q8NH73 311 aa7.34□□□□□ -1.23
VPS50-207ENST00000458530 GRPEL2Q8TAA5 225 aa7.34□□□□□ -1.23
VPS50-207ENST00000458530 DCUN1D4Q92564 292 aa7.34□□□□□ -1.23
VPS50-207ENST00000458530 WDR89Q96FK6 387 aaPredicted RBP7.34□□□□□ -1.23
VPS50-207ENST00000458530 OR10C1Q96KK4 312 aa7.34□□□□□ -1.23
VPS50-207ENST00000458530 AIFM2Q9BRQ8 373 aa7.34□□□□□ -1.23
VPS50-207ENST00000458530 AGMATQ9BSE5 352 aa7.34□□□□□ -1.23
VPS50-207ENST00000458530 PIMREGQ9BSJ6 248 aa7.34□□□□□ -1.23
VPS50-207ENST00000458530 MFFQ9GZY8 342 aa7.34□□□□□ -1.23
VPS50-207ENST00000458530 IFI27L2Q9H2X8 130 aa7.34□□□□□ -1.23
VPS50-207ENST00000458530 PRR13Q9NZ81 148 aa7.34□□□□□ -1.23
VPS50-207ENST00000458530 MBD2Q9UBB5 411 aa7.34□□□□□ -1.23
VPS50-207ENST00000458530 AMMECR1Q9Y4X0 333 aaPredicted RBP7.34□□□□□ -1.23
VPS50-207ENST00000458530 A0A087X0M5 115 aa7.33□□□□□ -1.24
VPS50-207ENST00000458530 TRAV14DV4A0A0A6YYC5 116 aa7.33□□□□□ -1.24
VPS50-207ENST00000458530 PPIAL4CA0A0B4J2A2 164 aa7.33□□□□□ -1.24
VPS50-207ENST00000458530 A0A1B0GX30 115 aa7.33□□□□□ -1.24
VPS50-207ENST00000458530 MEX3AA1L020 520 aaKnown RBP7.33□□□□□ -1.24
VPS50-207ENST00000458530 C17orf98A8MV24 154 aa7.33□□□□□ -1.24
VPS50-207ENST00000458530 M0R1W7 72 aa7.33□□□□□ -1.24
VPS50-207ENST00000458530 WRBO00258 174 aa7.33□□□□□ -1.24
VPS50-207ENST00000458530 TOR1AO14656 332 aa7.33□□□□□ -1.24
VPS50-207ENST00000458530 ARPC5O15511 151 aa7.33□□□□□ -1.24
VPS50-207ENST00000458530 ST8SIA3O43173 380 aa7.33□□□□□ -1.24
VPS50-207ENST00000458530 ENSAO43768 121 aaKnown RBP7.33□□□□□ -1.24
VPS50-207ENST00000458530 CRLF1O75462 422 aa7.33□□□□□ -1.24
VPS50-207ENST00000458530 APOA2P02652 100 aa7.33□□□□□ -1.24
VPS50-207ENST00000458530 PPIAL4GP0DN37 164 aa7.33□□□□□ -1.24
VPS50-207ENST00000458530 IGHV1-8P0DP01 117 aa7.33□□□□□ -1.24
VPS50-207ENST00000458530 RRASP10301 218 aa7.33□□□□□ -1.24
VPS50-207ENST00000458530 CCL3L1P16619 93 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms