RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 MOSPD3O75425 235 aa16.9■□□□□ 0.3
SNX27-204ENST00000458013 IGHV3OR16-8A0A075B7F1 116 aa16.9■□□□□ 0.3
SNX27-204ENST00000458013 DUSP15Q9H1R2 295 aaPredicted RBP16.9■□□□□ 0.3
SNX27-204ENST00000458013 CRYBA2P53672 197 aa16.9■□□□□ 0.3
SNX27-204ENST00000458013 WNT5BQ9H1J7 359 aa16.9■□□□□ 0.3
SNX27-204ENST00000458013 H0Y980 276 aa16.9■□□□□ 0.3
SNX27-204ENST00000458013 STAG3L2P0CL84 134 aa16.9■□□□□ 0.3
SNX27-204ENST00000458013 P2RY4P51582 365 aa16.9■□□□□ 0.3
SNX27-204ENST00000458013 ERASQ7Z444 233 aa16.9■□□□□ 0.3
SNX27-204ENST00000458013 TMEM252Q8N6L7 170 aa16.9■□□□□ 0.3
SNX27-204ENST00000458013 SMRP1Q8NCR6 262 aa16.9■□□□□ 0.3
SNX27-204ENST00000458013 PLP1P60201 277 aa16.89■□□□□ 0.29
SNX27-204ENST00000458013 ISXQ2M1V0 245 aa16.89■□□□□ 0.29
SNX27-204ENST00000458013 H1FOOQ8IZA3 346 aaPredicted RBP16.89■□□□□ 0.29
SNX27-204ENST00000458013 OR4C13Q8NGP0 309 aa16.89■□□□□ 0.29
SNX27-204ENST00000458013 IDI2-AS1Q9NZ38 188 aa16.89■□□□□ 0.29
SNX27-204ENST00000458013 SRIP30626 198 aa16.89■□□□□ 0.29
SNX27-204ENST00000458013 FGFRL1Q8N441 504 aa16.89■□□□□ 0.29
SNX27-204ENST00000458013 OR1P1Q8NH06 330 aa16.89■□□□□ 0.29
SNX27-204ENST00000458013 ZNF818PQ6ZRF7 136 aa16.89■□□□□ 0.29
SNX27-204ENST00000458013 SELENOKQ9Y6D0 94 aa16.89■□□□□ 0.29
SNX27-204ENST00000458013 TBL2Q9Y4P3 447 aaKnown RBP16.89■□□□□ 0.29
SNX27-204ENST00000458013 GLIPR1P48060 266 aa16.89■□□□□ 0.29
SNX27-204ENST00000458013 MEIG1Q5JSS6 88 aa16.89■□□□□ 0.29
SNX27-204ENST00000458013 BIVMQ86UB2 503 aa16.89■□□□□ 0.29
SNX27-204ENST00000458013 ASCC3Q8N3C0 2202 aaKnown RBP16.89■□□□□ 0.29
SNX27-204ENST00000458013 HLA-DQB1P01920 261 aa16.88■□□□□ 0.29
SNX27-204ENST00000458013 LINC01560Q8TB33 94 aa16.88■□□□□ 0.29
SNX27-204ENST00000458013 TIMP4Q99727 224 aa16.88■□□□□ 0.29
SNX27-204ENST00000458013 SMCHD1A6NHR9 2005 aa16.88■□□□□ 0.29
SNX27-204ENST00000458013 PCM1Q15154 2024 aa16.88■□□□□ 0.29
SNX27-204ENST00000458013 ZBTB34Q8NCN2 500 aa16.88■□□□□ 0.29
SNX27-204ENST00000458013 MCM3APO60318 1980 aa16.88■□□□□ 0.29
SNX27-204ENST00000458013 RECKO95980 971 aa16.88■□□□□ 0.29
SNX27-204ENST00000458013 CFDP00746 253 aaPredicted RBP16.88■□□□□ 0.29
SNX27-204ENST00000458013 FTH1P19P0C7X4 201 aa16.88■□□□□ 0.29
SNX27-204ENST00000458013 RPL8P62917 257 aaKnown RBP16.88■□□□□ 0.29
SNX27-204ENST00000458013 Q5BKY6 102 aa16.88■□□□□ 0.29
SNX27-204ENST00000458013 PUSL1Q8N0Z8 303 aaKnown RBP16.88■□□□□ 0.29
SNX27-204ENST00000458013 ST6GALNAC6Q969X2 333 aa16.88■□□□□ 0.29
SNX27-204ENST00000458013 CBLN4Q9NTU7 201 aa16.88■□□□□ 0.29
SNX27-204ENST00000458013 C9JCJ5 164 aa16.88■□□□□ 0.29
SNX27-204ENST00000458013 TMEM222Q9H0R3 208 aa16.88■□□□□ 0.29
SNX27-204ENST00000458013 FOXI3A8MTJ6 420 aaPredicted RBP16.87■□□□□ 0.29
SNX27-204ENST00000458013 MPV17P39210 176 aa16.87■□□□□ 0.29
SNX27-204ENST00000458013 GPR82Q96P67 336 aa16.87■□□□□ 0.29
SNX27-204ENST00000458013 WNT9BO14905 357 aa16.87■□□□□ 0.29
SNX27-204ENST00000458013 GPX1P07203 203 aa16.87■□□□□ 0.29
SNX27-204ENST00000458013 RPL39P5Q59GN2 51 aa16.87■□□□□ 0.29
SNX27-204ENST00000458013 CCDC144NLQ6NUI1 221 aa16.87■□□□□ 0.29
SNX27-204ENST00000458013 OR13C6PQ8NH95 151 aa16.87■□□□□ 0.29
SNX27-204ENST00000458013 DIRC2Q96SL1 478 aa16.87■□□□□ 0.29
SNX27-204ENST00000458013 TMEM56-RWDD3S4R434 201 aa16.87■□□□□ 0.29
SNX27-204ENST00000458013 C18orf15Q96N68 181 aa16.87■□□□□ 0.29
SNX27-204ENST00000458013 ZNF345Q14585 488 aa16.87■□□□□ 0.29
SNX27-204ENST00000458013 ZFC3H1O60293 1989 aaKnown RBP16.87■□□□□ 0.29
SNX27-204ENST00000458013 STPG1Q5TH74 334 aa16.87■□□□□ 0.29
SNX27-204ENST00000458013 ZNF660Q6AZW8 331 aaPredicted RBP16.86■□□□□ 0.29
SNX27-204ENST00000458013 RGPD4Q7Z3J3 1758 aa16.86■□□□□ 0.29
SNX27-204ENST00000458013 GCGP01275 180 aa16.86■□□□□ 0.29
SNX27-204ENST00000458013 LBHQ53QV2 105 aaPredicted RBP16.86■□□□□ 0.29
SNX27-204ENST00000458013 DDB2Q92466 427 aa16.86■□□□□ 0.29
SNX27-204ENST00000458013 DLL3Q9NYJ7 618 aa16.86■□□□□ 0.29
SNX27-204ENST00000458013 SF3B6Q9Y3B4 125 aaKnown RBP16.86■□□□□ 0.29
SNX27-204ENST00000458013 A0A1W2PRX2 142 aa16.86■□□□□ 0.29
SNX27-204ENST00000458013 FABP2P12104 132 aa16.86■□□□□ 0.29
SNX27-204ENST00000458013 RELQ04864 619 aaPredicted RBP16.86■□□□□ 0.29
SNX27-204ENST00000458013 ATP5G2Q06055 141 aa16.86■□□□□ 0.29
SNX27-204ENST00000458013 FAM214BQ7L5A3 538 aa16.86■□□□□ 0.29
SNX27-204ENST00000458013 ZNF418Q8TF45 676 aaPredicted RBP16.86■□□□□ 0.29
SNX27-204ENST00000458013 TAF15Q92804 592 aaKnown RBP eCLIP16.86■□□□□ 0.29
SNX27-204ENST00000458013 SCNM1Q9BWG6 230 aa16.86■□□□□ 0.29
SNX27-204ENST00000458013 LHFPL6Q9Y693 200 aa16.86■□□□□ 0.29
SNX27-204ENST00000458013 PPIAL4CA0A0B4J2A2 164 aa16.86■□□□□ 0.29
SNX27-204ENST00000458013 PPIAL4GP0DN37 164 aa16.86■□□□□ 0.29
SNX27-204ENST00000458013 MOB4Q9Y3A3 225 aa16.86■□□□□ 0.29
SNX27-204ENST00000458013 FAM209BQ5JX69 171 aa16.85■□□□□ 0.29
SNX27-204ENST00000458013 FAM201AQ5SY85 155 aa16.85■□□□□ 0.29
SNX27-204ENST00000458013 DCTN5Q9BTE1 182 aa16.85■□□□□ 0.29
SNX27-204ENST00000458013 WDR54Q9H977 334 aa16.85■□□□□ 0.29
SNX27-204ENST00000458013 COLQQ9Y215 455 aaPredicted RBP16.85■□□□□ 0.29
SNX27-204ENST00000458013 FAM27BQ5VT28 67 aa16.85■□□□□ 0.29
SNX27-204ENST00000458013 PNKDQ8N490 385 aa16.85■□□□□ 0.29
SNX27-204ENST00000458013 MAP1LC3AQ9H492 121 aa16.85■□□□□ 0.29
SNX27-204ENST00000458013 TMEM160Q9NX00 188 aa16.85■□□□□ 0.29
SNX27-204ENST00000458013 LINC00469Q8N7U9 141 aa16.85■□□□□ 0.29
SNX27-204ENST00000458013 PARD6GQ9BYG4 376 aaPredicted RBP16.85■□□□□ 0.29
SNX27-204ENST00000458013 LEPROTL1O95214 131 aa16.85■□□□□ 0.29
SNX27-204ENST00000458013 GOLT1AQ6ZVE7 132 aa16.85■□□□□ 0.29
SNX27-204ENST00000458013 PLXNB2O15031 1838 aa16.85■□□□□ 0.29
SNX27-204ENST00000458013 A1L4Q6 167 aa16.85■□□□□ 0.29
SNX27-204ENST00000458013 A8MWL6 223 aa16.85■□□□□ 0.29
SNX27-204ENST00000458013 OR10S1Q8NGN2 331 aa16.85■□□□□ 0.29
SNX27-204ENST00000458013 CCL19Q99731 98 aa16.85■□□□□ 0.29
SNX27-204ENST00000458013 MGST3O14880 152 aa16.84■□□□□ 0.29
SNX27-204ENST00000458013 DXOO77932 396 aaKnown RBP16.84■□□□□ 0.29
SNX27-204ENST00000458013 LIMS1P48059 325 aa16.84■□□□□ 0.29
SNX27-204ENST00000458013 ZNF273Q14593 569 aa16.84■□□□□ 0.29
SNX27-204ENST00000458013 MARVELD3Q96A59 401 aa16.84■□□□□ 0.29
SNX27-204ENST00000458013 OR51M1Q9H341 326 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms