RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 FCGR2AP12318 317 aa3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 KLF3P57682 345 aaPredicted RBP3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 TAS2R31P59538 309 aa3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 VWC2Q2TAL6 325 aa3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 CARD17Q5XLA6 110 aa3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 CLEC18CQ8NCF0 446 aa3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 OR2V1Q8NHB1 315 aa3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 BTF3L4Q96K17 158 aa3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 JMJD8Q96S16 334 aa3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 MAP1LC3BQ9GZQ8 125 aa3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 PLEKHF2Q9H8W4 249 aa3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 PLEKHJ1Q9NW61 149 aa3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 TBL2Q9Y4P3 447 aaKnown RBP3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 A0A0U1RQK1 487 aa3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 ZNF320A2RRD8 509 aa3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 OR6A2O95222 327 aa3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 VDAC1P21796 283 aa3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 CMPK1P30085 196 aa3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 UBE2G2P60604 165 aa3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 RPS15AP62244 130 aaKnown RBP3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 RPL30P62888 115 aaKnown RBP3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 VAMP2P63027 116 aa3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 KIR3DS1Q14943 382 aa3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 SPINK9Q5DT21 86 aa3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 LEMD1Q68G75 181 aa3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 ABHD3Q8WU67 409 aa3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 ZDHHC16Q969W1 377 aa3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 SGCZQ96LD1 299 aa3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 GSX1Q9H4S2 264 aaPredicted RBP3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 DEC1Q9P2X7 70 aa3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 BAHCC1Q9P281 2608 aa3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 IGKV1OR2-108A0A075B7D4 117 aa3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 IGHV3-15A0A0B4J1V0 119 aa3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 C20orf202A1L168 122 aa3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 ZNF785A8K8V0 405 aa3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 FCN1O00602 326 aa3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 TNFRSF10CO14798 259 aa3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 WISP2O76076 250 aa3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 ZNF728P0DKX0 622 aa3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 ADH5P11766 374 aa3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 ZNF138P52744 262 aa3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 HIST3H3Q16695 136 aa3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 TMEM241Q24JQ0 296 aa3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 COL5A1-AS1Q5SY13 56 aa3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 OIT3Q8WWZ8 545 aa3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 NUDT11Q96G61 164 aa3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 ACY3Q96HD9 319 aa3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 WIPI2Q9Y4P8 454 aa3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 C3orf85A0A1B0GTC6 90 aa3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 ZNF850A8MQ14 1090 aa3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 RENP00797 406 aa3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 FAM120AOSQ5T036 256 aa3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 MORN5Q5VZ52 161 aa3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 AMMECR1LQ6DCA0 310 aa3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 SPACA3Q8IXA5 215 aa3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 Q8TCH9 128 aa3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 MMABQ96EY8 250 aaPredicted RBP3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 KLHDC7BQ96G42 594 aa3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 RNF2Q99496 336 aa3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 GPER1Q99527 375 aa3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 PLK3Q9H4B4 646 aa3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 STRAPQ9Y3F4 350 aaKnown RBP3.8□□□□□ -1.8
DEPDC1-202ENST00000456315 TRAV36DV7A0A075B6V5 113 aa3.79□□□□□ -1.8
DEPDC1-202ENST00000456315 MUC21A0A0G2JKD1 596 aa3.79□□□□□ -1.8
DEPDC1-202ENST00000456315 MUC21A0A140T8X8 626 aa3.79□□□□□ -1.8
DEPDC1-202ENST00000456315 CXorf51AA0A1B0GTR3 108 aa3.79□□□□□ -1.8
DEPDC1-202ENST00000456315 ANKUB1A6NFN9 424 aa3.79□□□□□ -1.8
DEPDC1-202ENST00000456315 AQP7P3A6NL99 342 aa3.79□□□□□ -1.8
DEPDC1-202ENST00000456315 ZNF737O75373 536 aa3.79□□□□□ -1.8
DEPDC1-202ENST00000456315 OR7C1O76099 320 aaPredicted RBP3.79□□□□□ -1.8
DEPDC1-202ENST00000456315 IL33O95760 270 aa3.79□□□□□ -1.8
DEPDC1-202ENST00000456315 HRASP01112 189 aa3.79□□□□□ -1.8
DEPDC1-202ENST00000456315 PDGFBP01127 241 aaPredicted RBP3.79□□□□□ -1.8
DEPDC1-202ENST00000456315 MUC21Q5SSG8 566 aa3.79□□□□□ -1.8
DEPDC1-202ENST00000456315 OR10G4Q8NGN3 311 aa3.79□□□□□ -1.8
DEPDC1-202ENST00000456315 NEU4Q8WWR8 484 aaPredicted RBP3.79□□□□□ -1.8
DEPDC1-202ENST00000456315 TAF15Q92804 592 aaKnown RBP eCLIP3.79□□□□□ -1.8
DEPDC1-202ENST00000456315 TTTY13Q9BZ97 58 aa3.79□□□□□ -1.8
DEPDC1-202ENST00000456315 CLN8Q9UBY8 286 aa3.79□□□□□ -1.8
DEPDC1-202ENST00000456315 DKKL1Q9UK85 242 aa3.79□□□□□ -1.8
DEPDC1-202ENST00000456315 IGLC7A0M8Q6 106 aa3.79□□□□□ -1.8
DEPDC1-202ENST00000456315 SERPINE3A8MV23 424 aa3.79□□□□□ -1.8
DEPDC1-202ENST00000456315 TIAF1O95411 115 aa3.79□□□□□ -1.8
DEPDC1-202ENST00000456315 SERPINA7P05543 415 aa3.79□□□□□ -1.8
DEPDC1-202ENST00000456315 PSG2P11465 335 aa3.79□□□□□ -1.8
DEPDC1-202ENST00000456315 HNRNPA2B1P22626 353 aaKnown RBP3.79□□□□□ -1.8
DEPDC1-202ENST00000456315 CLDN15P56746 228 aa3.79□□□□□ -1.8
DEPDC1-202ENST00000456315 RPS18P62269 152 aaKnown RBP3.79□□□□□ -1.8
DEPDC1-202ENST00000456315 HIST1H3AP68431 136 aa3.79□□□□□ -1.8
DEPDC1-202ENST00000456315 PSG9Q00887 426 aa3.79□□□□□ -1.8
DEPDC1-202ENST00000456315 TLE4Q04727 773 aa3.79□□□□□ -1.8
DEPDC1-202ENST00000456315 EIF3IQ13347 325 aaKnown RBP3.79□□□□□ -1.8
DEPDC1-202ENST00000456315 HES3Q5TGS1 186 aa3.79□□□□□ -1.8
DEPDC1-202ENST00000456315 SPATA31B1PQ5VZV4 182 aa3.79□□□□□ -1.8
DEPDC1-202ENST00000456315 NUDT16L1Q9BRJ7 211 aaKnown RBP3.79□□□□□ -1.8
DEPDC1-202ENST00000456315 TIMM29Q9BSF4 260 aa3.79□□□□□ -1.8
DEPDC1-202ENST00000456315 WDR61Q9GZS3 305 aaKnown RBP3.79□□□□□ -1.8
DEPDC1-202ENST00000456315 RNASE7Q9H1E1 156 aaKnown RBP3.79□□□□□ -1.8
DEPDC1-202ENST00000456315 CISD1Q9NZ45 108 aaKnown RBP3.79□□□□□ -1.8
DEPDC1-202ENST00000456315 ST3GAL6Q9Y274 331 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms