RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 SDHCQ99643 169 aaPredicted RBP4.55□□□□□ -1.68
CSMD3-204ENST00000455883 TINAGL1Q9GZM7 467 aaPredicted RBP4.55□□□□□ -1.68
CSMD3-204ENST00000455883 LPAR5Q9H1C0 372 aa4.55□□□□□ -1.68
CSMD3-204ENST00000455883 WNT16Q9UBV4 365 aa4.55□□□□□ -1.68
CSMD3-204ENST00000455883 OR9G9P0C7N8 305 aa4.55□□□□□ -1.68
CSMD3-204ENST00000455883 TMEM255AQ5JRV8 349 aa4.55□□□□□ -1.68
CSMD3-204ENST00000455883 C1orf210Q8IVY1 113 aa4.55□□□□□ -1.68
CSMD3-204ENST00000455883 TTC9CQ8N5M4 171 aa4.55□□□□□ -1.68
CSMD3-204ENST00000455883 ZNF645Q8N7E2 425 aa4.55□□□□□ -1.68
CSMD3-204ENST00000455883 OR52E5Q8NH55 327 aa4.55□□□□□ -1.68
CSMD3-204ENST00000455883 FUT9Q9Y231 359 aa4.55□□□□□ -1.68
CSMD3-204ENST00000455883 PHLDA3Q9Y5J5 127 aa4.55□□□□□ -1.68
CSMD3-204ENST00000455883 HYAL3O43820 417 aaPredicted RBP4.55□□□□□ -1.68
CSMD3-204ENST00000455883 DYNLT3P51808 116 aa4.55□□□□□ -1.68
CSMD3-204ENST00000455883 SOX4Q06945 474 aaPredicted RBP4.55□□□□□ -1.68
CSMD3-204ENST00000455883 CDKN3Q16667 212 aa4.55□□□□□ -1.68
CSMD3-204ENST00000455883 ZNF506Q5JVG8 444 aa4.55□□□□□ -1.68
CSMD3-204ENST00000455883 TBC1D26Q86UD7 250 aa4.55□□□□□ -1.68
CSMD3-204ENST00000455883 INSM2Q96T92 566 aaPredicted RBP4.55□□□□□ -1.68
CSMD3-204ENST00000455883 FAM103A1Q9BTL3 118 aaKnown RBP4.55□□□□□ -1.68
CSMD3-204ENST00000455883 CYSLTR1Q9Y271 337 aa4.55□□□□□ -1.68
CSMD3-204ENST00000455883 TMEM56-RWDD3S4R434 201 aa4.55□□□□□ -1.68
CSMD3-204ENST00000455883 hCG_38984A0A1B0GV85 526 aa4.55□□□□□ -1.68
CSMD3-204ENST00000455883 A0A1B0GV90 55 aa4.55□□□□□ -1.68
CSMD3-204ENST00000455883 OSR1Q8TAX0 266 aaPredicted RBP4.55□□□□□ -1.68
CSMD3-204ENST00000455883 CST7O76096 145 aa4.55□□□□□ -1.68
CSMD3-204ENST00000455883 TSPAN13O95857 204 aa4.55□□□□□ -1.68
CSMD3-204ENST00000455883 WNT1P04628 370 aa4.55□□□□□ -1.68
CSMD3-204ENST00000455883 SRFP11831 508 aa4.55□□□□□ -1.68
CSMD3-204ENST00000455883 CEACAM6P40199 344 aa4.55□□□□□ -1.68
CSMD3-204ENST00000455883 HSD52Q0P140 79 aa4.55□□□□□ -1.68
CSMD3-204ENST00000455883 PAXXQ9BUH6 204 aa4.55□□□□□ -1.68
CSMD3-204ENST00000455883 MRPL27Q9P0M9 148 aaKnown RBP4.55□□□□□ -1.68
CSMD3-204ENST00000455883 MMP17Q9ULZ9 603 aa4.55□□□□□ -1.68
CSMD3-204ENST00000455883 PTPRSQ13332 1948 aa4.55□□□□□ -1.68
CSMD3-204ENST00000455883 WDR90Q96KV7 1748 aa4.55□□□□□ -1.68
CSMD3-204ENST00000455883 TRBV5-5A0A0J9YX44 114 aa4.55□□□□□ -1.68
CSMD3-204ENST00000455883 POLR2IP36954 125 aaKnown RBP4.55□□□□□ -1.68
CSMD3-204ENST00000455883 LRRTM3Q86VH5 581 aa4.55□□□□□ -1.68
CSMD3-204ENST00000455883 SIGMAR1Q99720 223 aa4.55□□□□□ -1.68
CSMD3-204ENST00000455883 ASCL2Q99929 193 aa4.55□□□□□ -1.68
CSMD3-204ENST00000455883 SLC26A1Q9H2B4 701 aa4.55□□□□□ -1.68
CSMD3-204ENST00000455883 ERRFI1Q9UJM3 462 aaPredicted RBP4.55□□□□□ -1.68
CSMD3-204ENST00000455883 TRBV23OR9-2A0A075B6M9 112 aa4.55□□□□□ -1.68
CSMD3-204ENST00000455883 OR51G1Q8NGK1 321 aa4.55□□□□□ -1.68
CSMD3-204ENST00000455883 ASB10Q8WXI3 467 aa4.55□□□□□ -1.68
CSMD3-204ENST00000455883 WDR13Q9H1Z4 485 aa4.55□□□□□ -1.68
CSMD3-204ENST00000455883 IGHV1-69-2A0A0G2JMI3 117 aa4.54□□□□□ -1.68
CSMD3-204ENST00000455883 TMEM8BA6NDV4 472 aa4.54□□□□□ -1.68
CSMD3-204ENST00000455883 FAM171A2A8MVW0 826 aa4.54□□□□□ -1.68
CSMD3-204ENST00000455883 FAHP16930 419 aa4.54□□□□□ -1.68
CSMD3-204ENST00000455883 AVPR2P30518 371 aa4.54□□□□□ -1.68
CSMD3-204ENST00000455883 SNRPD3P62318 126 aaKnown RBP4.54□□□□□ -1.68
CSMD3-204ENST00000455883 SPANXN1Q5VSR9 72 aa4.54□□□□□ -1.68
CSMD3-204ENST00000455883 MAMSTRQ6ZN01 415 aa4.54□□□□□ -1.68
CSMD3-204ENST00000455883 DRAM1Q8N682 238 aa4.54□□□□□ -1.68
CSMD3-204ENST00000455883 VSTM2LQ96N03 204 aa4.54□□□□□ -1.68
CSMD3-204ENST00000455883 SLC25A10Q9UBX3 287 aaPredicted RBP4.54□□□□□ -1.68
CSMD3-204ENST00000455883 PLPP3O14495 311 aa4.54□□□□□ -1.68
CSMD3-204ENST00000455883 LGALS1P09382 135 aaKnown RBP4.54□□□□□ -1.68
CSMD3-204ENST00000455883 GUCA2AQ02747 115 aa4.54□□□□□ -1.68
CSMD3-204ENST00000455883 C1orf162Q8NEQ5 155 aaPredicted RBP4.54□□□□□ -1.68
CSMD3-204ENST00000455883 DNAJC4Q9NNZ3 241 aa4.54□□□□□ -1.68
CSMD3-204ENST00000455883 ZFP64Q9NPA5 681 aa4.54□□□□□ -1.68
CSMD3-204ENST00000455883 RBMY1BA6NDE4 496 aaKnown RBP4.54□□□□□ -1.68
CSMD3-204ENST00000455883 RBMY1EA6NEQ0 496 aaKnown RBP4.54□□□□□ -1.68
CSMD3-204ENST00000455883 J3KTA2 159 aa4.54□□□□□ -1.68
CSMD3-204ENST00000455883 RBMY1DP0C7P1 496 aaKnown RBP4.54□□□□□ -1.68
CSMD3-204ENST00000455883 RBMY1A1P0DJD3 496 aaKnown RBP4.54□□□□□ -1.68
CSMD3-204ENST00000455883 RBMY1CP0DJD4 496 aa4.54□□□□□ -1.68
CSMD3-204ENST00000455883 WNT3P56703 355 aa4.54□□□□□ -1.68
CSMD3-204ENST00000455883 FGF12P61328 243 aa4.54□□□□□ -1.68
CSMD3-204ENST00000455883 MMDQ15546 238 aa4.54□□□□□ -1.68
CSMD3-204ENST00000455883 MLF2Q15773 248 aaPredicted RBP4.54□□□□□ -1.68
CSMD3-204ENST00000455883 TSACCQ96A04 125 aaPredicted RBP4.54□□□□□ -1.68
CSMD3-204ENST00000455883 GPR27Q9NS67 375 aa4.54□□□□□ -1.68
CSMD3-204ENST00000455883 A0A0G2JLM5 398 aa4.54□□□□□ -1.68
CSMD3-204ENST00000455883 RPL36A-HNRNPH2H7BZ11 118 aa4.54□□□□□ -1.68
CSMD3-204ENST00000455883 NEGR1Q7Z3B1 354 aa4.54□□□□□ -1.68
CSMD3-204ENST00000455883 PGLYRP3Q96LB9 341 aa4.54□□□□□ -1.68
CSMD3-204ENST00000455883 TNFRSF19Q9NS68 423 aa4.54□□□□□ -1.68
CSMD3-204ENST00000455883 A6NL46 340 aa4.54□□□□□ -1.68
CSMD3-204ENST00000455883 MGST3O14880 152 aa4.54□□□□□ -1.68
CSMD3-204ENST00000455883 ZNF77Q15935 545 aa4.54□□□□□ -1.68
CSMD3-204ENST00000455883 SFTPA2Q8IWL1 248 aa4.54□□□□□ -1.68
CSMD3-204ENST00000455883 SFTPA1Q8IWL2 248 aa4.54□□□□□ -1.68
CSMD3-204ENST00000455883 OR10S1Q8NGN2 331 aa4.54□□□□□ -1.68
CSMD3-204ENST00000455883 SSBP4Q9BWG4 385 aaPredicted RBP4.54□□□□□ -1.68
CSMD3-204ENST00000455883 C9JCJ5 164 aa4.54□□□□□ -1.68
CSMD3-204ENST00000455883 EWSR1Q01844 656 aaKnown RBP eCLIP4.54□□□□□ -1.68
CSMD3-204ENST00000455883 OR10W1Q8NGF6 305 aa4.54□□□□□ -1.68
CSMD3-204ENST00000455883 FAM57AQ8TBR7 257 aa4.54□□□□□ -1.68
CSMD3-204ENST00000455883 THAP3Q8WTV1 239 aaPredicted RBP4.54□□□□□ -1.68
CSMD3-204ENST00000455883 SRSF8Q9BRL6 282 aaKnown RBP4.54□□□□□ -1.68
CSMD3-204ENST00000455883 TMEM208Q9BTX3 173 aa4.54□□□□□ -1.68
CSMD3-204ENST00000455883 CFPP27918 469 aa4.54□□□□□ -1.68
CSMD3-204ENST00000455883 RBM11P57052 281 aaKnown RBP4.54□□□□□ -1.68
CSMD3-204ENST00000455883 TIMM23BQ5SRD1 257 aa4.54□□□□□ -1.68
CSMD3-204ENST00000455883 C1orf185Q5T7R7 199 aa4.54□□□□□ -1.68
CSMD3-204ENST00000455883 LAMTOR1Q6IAA8 161 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms