RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 C11orf42Q8N5U0 333 aa10.16□□□□□ -0.78
COL27A1-202ENST00000451716 TPRX1Q8N7U7 411 aa10.16□□□□□ -0.78
COL27A1-202ENST00000451716 TMEM171Q8WVE6 324 aa10.16□□□□□ -0.78
COL27A1-202ENST00000451716 C11orf1Q9H5F2 150 aa10.16□□□□□ -0.78
COL27A1-202ENST00000451716 ROS1P08922 2347 aa10.16□□□□□ -0.78
COL27A1-202ENST00000451716 H0Y980 276 aa10.16□□□□□ -0.78
COL27A1-202ENST00000451716 RNASEK-C17orf49H0YIS7 233 aa10.16□□□□□ -0.78
COL27A1-202ENST00000451716 HAND1O96004 215 aa10.16□□□□□ -0.78
COL27A1-202ENST00000451716 PRH1P02810 166 aa10.16□□□□□ -0.78
COL27A1-202ENST00000451716 SNRNP70P08621 437 aaKnown RBP10.16□□□□□ -0.78
COL27A1-202ENST00000451716 RPS10P46783 165 aaKnown RBP10.16□□□□□ -0.78
COL27A1-202ENST00000451716 AESQ08117 197 aa10.16□□□□□ -0.78
COL27A1-202ENST00000451716 TMEM182Q6ZP80 229 aaPredicted RBP10.16□□□□□ -0.78
COL27A1-202ENST00000451716 SEM1Q6ZVN7 128 aa10.16□□□□□ -0.78
COL27A1-202ENST00000451716 C11orf53Q8IXP5 236 aa10.16□□□□□ -0.78
COL27A1-202ENST00000451716 OR5D13Q8NGL4 314 aa10.16□□□□□ -0.78
COL27A1-202ENST00000451716 STARD4Q96DR4 205 aa10.16□□□□□ -0.78
COL27A1-202ENST00000451716 CABLES2Q9BTV7 478 aa10.16□□□□□ -0.78
COL27A1-202ENST00000451716 ARV1Q9H2C2 271 aa10.16□□□□□ -0.78
COL27A1-202ENST00000451716 PARP11Q9NR21 331 aa10.16□□□□□ -0.78
COL27A1-202ENST00000451716 TAAR3PQ9P1P4 343 aa10.16□□□□□ -0.78
COL27A1-202ENST00000451716 RNF150Q9ULK6 438 aa10.16□□□□□ -0.78
COL27A1-202ENST00000451716 APC2O95996 2303 aa10.16□□□□□ -0.78
COL27A1-202ENST00000451716 K7EM74 188 aa10.16□□□□□ -0.78
COL27A1-202ENST00000451716 TM4SF5O14894 197 aa10.16□□□□□ -0.78
COL27A1-202ENST00000451716 TCF15Q12870 199 aa10.16□□□□□ -0.78
COL27A1-202ENST00000451716 ZNF146Q15072 292 aa10.16□□□□□ -0.78
COL27A1-202ENST00000451716 Q6ZRM9 215 aa10.16□□□□□ -0.78
COL27A1-202ENST00000451716 C1QL4Q86Z23 238 aa10.16□□□□□ -0.78
COL27A1-202ENST00000451716 ODF3L1Q8IXM7 274 aa10.16□□□□□ -0.78
COL27A1-202ENST00000451716 Q8IYB0 196 aa10.16□□□□□ -0.78
COL27A1-202ENST00000451716 TMEM252Q8N6L7 170 aa10.16□□□□□ -0.78
COL27A1-202ENST00000451716 OR8G5Q8NG78 346 aa10.16□□□□□ -0.78
COL27A1-202ENST00000451716 SPIN2AQ99865 258 aa10.16□□□□□ -0.78
COL27A1-202ENST00000451716 SPIN2BQ9BPZ2 258 aa10.16□□□□□ -0.78
COL27A1-202ENST00000451716 ALKBH7Q9BT30 221 aaPredicted RBP10.16□□□□□ -0.78
COL27A1-202ENST00000451716 PCNX1Q96RV3 2341 aa10.15□□□□□ -0.78
COL27A1-202ENST00000451716 CCL25O15444 150 aa10.15□□□□□ -0.78
COL27A1-202ENST00000451716 ARG1P05089 322 aa10.15□□□□□ -0.78
COL27A1-202ENST00000451716 SFTA3P0C7M3 94 aa10.15□□□□□ -0.78
COL27A1-202ENST00000451716 GZMBP10144 247 aa10.15□□□□□ -0.78
COL27A1-202ENST00000451716 RPL29P47914 159 aaKnown RBP10.15□□□□□ -0.78
COL27A1-202ENST00000451716 CAMLGP49069 296 aa10.15□□□□□ -0.78
COL27A1-202ENST00000451716 OR5C1Q8NGR4 320 aa10.15□□□□□ -0.78
COL27A1-202ENST00000451716 OR1L1Q8NH94 360 aa10.15□□□□□ -0.78
COL27A1-202ENST00000451716 GPR146Q96CH1 333 aa10.15□□□□□ -0.78
COL27A1-202ENST00000451716 TXN2Q99757 166 aa10.15□□□□□ -0.78
COL27A1-202ENST00000451716 GINS3Q9BRX5 216 aa10.15□□□□□ -0.78
COL27A1-202ENST00000451716 ABHD14AQ9BUJ0 271 aa10.15□□□□□ -0.78
COL27A1-202ENST00000451716 METRNQ9UJH8 293 aa10.15□□□□□ -0.78
COL27A1-202ENST00000451716 COL12A1Q99715 3063 aa10.15□□□□□ -0.78
COL27A1-202ENST00000451716 CHD3Q12873 2000 aaKnown RBP10.15□□□□□ -0.78
COL27A1-202ENST00000451716 PLCE1Q9P212 2302 aa10.15□□□□□ -0.78
COL27A1-202ENST00000451716 IGHV1-18A0A0C4DH31 117 aa10.15□□□□□ -0.79
COL27A1-202ENST00000451716 TSPAN15O95858 294 aa10.15□□□□□ -0.79
COL27A1-202ENST00000451716 IGKV1-39P01597 117 aa10.15□□□□□ -0.79
COL27A1-202ENST00000451716 IGKV1D-39P04432 117 aa10.15□□□□□ -0.79
COL27A1-202ENST00000451716 DANCRP0C864 163 aa10.15□□□□□ -0.79
COL27A1-202ENST00000451716 ID3Q02535 119 aa10.15□□□□□ -0.79
COL27A1-202ENST00000451716 ZADH2Q8N4Q0 377 aa10.15□□□□□ -0.79
COL27A1-202ENST00000451716 PLSCR4Q9NRQ2 329 aa10.15□□□□□ -0.79
COL27A1-202ENST00000451716 M0QZ24 198 aa10.14□□□□□ -0.79
COL27A1-202ENST00000451716 SEC11BP0C7V7 166 aa10.14□□□□□ -0.79
COL27A1-202ENST00000451716 DYNLT3P51808 116 aa10.14□□□□□ -0.79
COL27A1-202ENST00000451716 PRRX1P54821 245 aa10.14□□□□□ -0.79
COL27A1-202ENST00000451716 ZNF71Q9NQZ8 489 aaPredicted RBP10.14□□□□□ -0.79
COL27A1-202ENST00000451716 LYRM2Q9NU23 88 aaPredicted RBP10.14□□□□□ -0.79
COL27A1-202ENST00000451716 PROCRQ9UNN8 238 aa10.14□□□□□ -0.79
COL27A1-202ENST00000451716 IGHV2OR16-5A0A0B4J2B6 119 aa10.14□□□□□ -0.79
COL27A1-202ENST00000451716 ZNF891A8MT65 544 aaPredicted RBP10.14□□□□□ -0.79
COL27A1-202ENST00000451716 S100GP29377 79 aa10.14□□□□□ -0.79
COL27A1-202ENST00000451716 MDH2P40926 338 aaKnown RBP10.14□□□□□ -0.79
COL27A1-202ENST00000451716 KLF3P57682 345 aaPredicted RBP10.14□□□□□ -0.79
COL27A1-202ENST00000451716 SELENOTP62341 195 aa10.14□□□□□ -0.79
COL27A1-202ENST00000451716 RUNX1Q01196 453 aa10.14□□□□□ -0.79
COL27A1-202ENST00000451716 JOSD1Q15040 202 aaPredicted RBP10.14□□□□□ -0.79
COL27A1-202ENST00000451716 PRSS57Q6UWY2 283 aa10.14□□□□□ -0.79
COL27A1-202ENST00000451716 LYG1Q8N1E2 194 aa10.14□□□□□ -0.79
COL27A1-202ENST00000451716 FAM213BQ8TBF2 198 aa10.14□□□□□ -0.79
COL27A1-202ENST00000451716 AKR1E2Q96JD6 320 aa10.14□□□□□ -0.79
COL27A1-202ENST00000451716 PLEKHF2Q9H8W4 249 aa10.14□□□□□ -0.79
COL27A1-202ENST00000451716 CACFD1Q9UGQ2 172 aa10.14□□□□□ -0.79
COL27A1-202ENST00000451716 IL19Q9UHD0 177 aa10.14□□□□□ -0.79
COL27A1-202ENST00000451716 DUSP13Q9UII6 198 aa10.14□□□□□ -0.79
COL27A1-202ENST00000451716 ZFP30Q9Y2G7 519 aa10.14□□□□□ -0.79
COL27A1-202ENST00000451716 XKRY2A2RUG3 117 aa10.13□□□□□ -0.79
COL27A1-202ENST00000451716 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.13□□□□□ -0.79
COL27A1-202ENST00000451716 CD5P06127 495 aa10.13□□□□□ -0.79
COL27A1-202ENST00000451716 ZNF83P51522 516 aa10.13□□□□□ -0.79
COL27A1-202ENST00000451716 PAX9P55771 341 aa10.13□□□□□ -0.79
COL27A1-202ENST00000451716 MSMPQ1L6U9 139 aa10.13□□□□□ -0.79
COL27A1-202ENST00000451716 BTNL3Q6UXE8 466 aa10.13□□□□□ -0.79
COL27A1-202ENST00000451716 WDR82Q6UXN9 313 aa10.13□□□□□ -0.79
COL27A1-202ENST00000451716 LRP11Q86VZ4 500 aa10.13□□□□□ -0.79
COL27A1-202ENST00000451716 ZNF596Q8TC21 504 aa10.13□□□□□ -0.79
COL27A1-202ENST00000451716 WFIKKN1Q96NZ8 548 aa10.13□□□□□ -0.79
COL27A1-202ENST00000451716 TUBA4BQ9H853 241 aa10.13□□□□□ -0.79
COL27A1-202ENST00000451716 CACNG5Q9UF02 275 aa10.13□□□□□ -0.79
COL27A1-202ENST00000451716 SPTBN4Q9H254 2564 aa10.13□□□□□ -0.79
COL27A1-202ENST00000451716 C7orf77A4D0Y5 90 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms