RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 TBL2Q9Y4P3 447 aaKnown RBP13.72□□□□□ -0.21
PRPF40A-204ENST00000450303 HILPDAQ9Y5L2 63 aa13.72□□□□□ -0.21
PRPF40A-204ENST00000450303 WNK1Q9H4A3 2382 aa13.71□□□□□ -0.21
PRPF40A-204ENST00000450303 IGHV3-43A0A0B4J1X8 118 aa13.71□□□□□ -0.21
PRPF40A-204ENST00000450303 M0QZ24 198 aa13.71□□□□□ -0.21
PRPF40A-204ENST00000450303 TIMM23O14925 209 aa13.71□□□□□ -0.21
PRPF40A-204ENST00000450303 WIPF1O43516 503 aa13.71□□□□□ -0.21
PRPF40A-204ENST00000450303 AMY2AP04746 511 aa13.71□□□□□ -0.21
PRPF40A-204ENST00000450303 IGHV3-43DP0DP04 118 aa13.71□□□□□ -0.21
PRPF40A-204ENST00000450303 PRRX1P54821 245 aa13.71□□□□□ -0.21
PRPF40A-204ENST00000450303 HERPUD1Q15011 391 aa13.71□□□□□ -0.21
PRPF40A-204ENST00000450303 MORN2Q502X0 79 aa13.71□□□□□ -0.21
PRPF40A-204ENST00000450303 LY6G6FQ5SQ64 297 aa13.71□□□□□ -0.21
PRPF40A-204ENST00000450303 C5orf24Q7Z6I8 188 aa13.71□□□□□ -0.21
PRPF40A-204ENST00000450303 ARRDC1Q8N5I2 433 aa13.71□□□□□ -0.21
PRPF40A-204ENST00000450303 OR11H7Q8NGC8 314 aa13.71□□□□□ -0.21
PRPF40A-204ENST00000450303 OR51S1Q8NGJ8 323 aa13.71□□□□□ -0.21
PRPF40A-204ENST00000450303 GRPEL2Q8TAA5 225 aa13.71□□□□□ -0.21
PRPF40A-204ENST00000450303 MALSU1Q96EH3 234 aa13.71□□□□□ -0.21
PRPF40A-204ENST00000450303 TOLLIPQ9H0E2 274 aa13.71□□□□□ -0.21
PRPF40A-204ENST00000450303 A0A087X0M5 115 aa13.7□□□□□ -0.22
PRPF40A-204ENST00000450303 IGHV2-26A0A0B4J1V2 119 aa13.7□□□□□ -0.22
PRPF40A-204ENST00000450303 IGKV1-6A0A0C4DH72 117 aa13.7□□□□□ -0.22
PRPF40A-204ENST00000450303 A0A1B0GX30 115 aa13.7□□□□□ -0.22
PRPF40A-204ENST00000450303 M0QYG6 137 aa13.7□□□□□ -0.22
PRPF40A-204ENST00000450303 TOR1AO14656 332 aa13.7□□□□□ -0.22
PRPF40A-204ENST00000450303 KCNAB3O43448 404 aa13.7□□□□□ -0.22
PRPF40A-204ENST00000450303 C4BPBP20851 252 aa13.7□□□□□ -0.22
PRPF40A-204ENST00000450303 LOXL3P58215 753 aa13.7□□□□□ -0.22
PRPF40A-204ENST00000450303 FAAP20Q6NZ36 180 aa13.7□□□□□ -0.22
PRPF40A-204ENST00000450303 TMEM219Q86XT9 240 aa13.7□□□□□ -0.22
PRPF40A-204ENST00000450303 H1FOOQ8IZA3 346 aaPredicted RBP13.7□□□□□ -0.22
PRPF40A-204ENST00000450303 ABHD12Q8N2K0 398 aa13.7□□□□□ -0.22
PRPF40A-204ENST00000450303 OR10V1Q8NGI7 309 aa13.7□□□□□ -0.22
PRPF40A-204ENST00000450303 OR4C13Q8NGP0 309 aa13.7□□□□□ -0.22
PRPF40A-204ENST00000450303 ZNF431Q8TF32 576 aaPredicted RBP13.7□□□□□ -0.22
PRPF40A-204ENST00000450303 CLEC7AQ9BXN2 247 aa13.7□□□□□ -0.22
PRPF40A-204ENST00000450303 ZNF436Q9C0F3 470 aaPredicted RBP13.7□□□□□ -0.22
PRPF40A-204ENST00000450303 TINAGL1Q9GZM7 467 aaPredicted RBP13.7□□□□□ -0.22
PRPF40A-204ENST00000450303 ALX4Q9H161 411 aaPredicted RBP13.7□□□□□ -0.22
PRPF40A-204ENST00000450303 RDH8Q9NYR8 311 aa13.7□□□□□ -0.22
PRPF40A-204ENST00000450303 OR1A1Q9P1Q5 309 aa13.7□□□□□ -0.22
PRPF40A-204ENST00000450303 MGAT4CQ9UBM8 478 aa13.7□□□□□ -0.22
PRPF40A-204ENST00000450303 RBM7Q9Y580 266 aaKnown RBP13.7□□□□□ -0.22
PRPF40A-204ENST00000450303 ITGB1BP1O14713 200 aa13.69□□□□□ -0.22
PRPF40A-204ENST00000450303 ANXA7P20073 488 aaKnown RBP13.69□□□□□ -0.22
PRPF40A-204ENST00000450303 CD34P28906 385 aa13.69□□□□□ -0.22
PRPF40A-204ENST00000450303 FCGR2CP31995 323 aa13.69□□□□□ -0.22
PRPF40A-204ENST00000450303 PPP1CCP36873 323 aaKnown RBP13.69□□□□□ -0.22
PRPF40A-204ENST00000450303 RAB7AP51149 207 aa13.69□□□□□ -0.22
PRPF40A-204ENST00000450303 HERV-K104P61576 105 aa13.69□□□□□ -0.22
PRPF40A-204ENST00000450303 DHRS11Q6UWP2 260 aa13.69□□□□□ -0.22
PRPF40A-204ENST00000450303 IDO2Q6ZQW0 420 aa13.69□□□□□ -0.22
PRPF40A-204ENST00000450303 C11orf44Q8N8P7 122 aa13.69□□□□□ -0.22
PRPF40A-204ENST00000450303 OR2AK2Q8NG84 335 aa13.69□□□□□ -0.22
PRPF40A-204ENST00000450303 OR9G1Q8NH87 305 aa13.69□□□□□ -0.22
PRPF40A-204ENST00000450303 ZNF596Q8TC21 504 aa13.69□□□□□ -0.22
PRPF40A-204ENST00000450303 ASB13Q8WXK3 278 aa13.69□□□□□ -0.22
PRPF40A-204ENST00000450303 SEC22CQ9BRL7 303 aa13.69□□□□□ -0.22
PRPF40A-204ENST00000450303 RAB18Q9NP72 206 aa13.69□□□□□ -0.22
PRPF40A-204ENST00000450303 TCF19Q9Y242 345 aa13.69□□□□□ -0.22
PRPF40A-204ENST00000450303 TET2Q6N021 2002 aaPredicted RBP13.69□□□□□ -0.22
PRPF40A-204ENST00000450303 A6NDX4 124 aa13.68□□□□□ -0.22
PRPF40A-204ENST00000450303 TSPAN15O95858 294 aa13.68□□□□□ -0.22
PRPF40A-204ENST00000450303 GIPP09681 153 aaPredicted RBP13.68□□□□□ -0.22
PRPF40A-204ENST00000450303 NFYAP23511 347 aaPredicted RBP13.68□□□□□ -0.22
PRPF40A-204ENST00000450303 ECI1P42126 302 aa13.68□□□□□ -0.22
PRPF40A-204ENST00000450303 LUMP51884 338 aaPredicted RBP13.68□□□□□ -0.22
PRPF40A-204ENST00000450303 RAP2BP61225 183 aa13.68□□□□□ -0.22
PRPF40A-204ENST00000450303 HABP2Q14520 560 aaPredicted RBP13.68□□□□□ -0.22
PRPF40A-204ENST00000450303 GNMTQ14749 295 aa13.68□□□□□ -0.22
PRPF40A-204ENST00000450303 C8orf31Q8N9H6 132 aa13.68□□□□□ -0.22
PRPF40A-204ENST00000450303 OR2T6Q8NHC8 308 aa13.68□□□□□ -0.22
PRPF40A-204ENST00000450303 ZNF2Q9BSG1 426 aaPredicted RBP13.68□□□□□ -0.22
PRPF40A-204ENST00000450303 NPFFR1Q9GZQ6 430 aa13.68□□□□□ -0.22
PRPF40A-204ENST00000450303 SLC2A8Q9NY64 477 aa13.68□□□□□ -0.22
PRPF40A-204ENST00000450303 OR2W1Q9Y3N9 320 aa13.68□□□□□ -0.22
PRPF40A-204ENST00000450303 MEGF8Q7Z7M0 2845 aa13.68□□□□□ -0.22
PRPF40A-204ENST00000450303 CMYA5Q8N3K9 4069 aa13.68□□□□□ -0.22
PRPF40A-204ENST00000450303 J3QR06 171 aa13.67□□□□□ -0.22
PRPF40A-204ENST00000450303 VSIG10L2P0DP72 767 aa13.67□□□□□ -0.22
PRPF40A-204ENST00000450303 IL3RAP26951 378 aa13.67□□□□□ -0.22
PRPF40A-204ENST00000450303 GNG10P50151 68 aa13.67□□□□□ -0.22
PRPF40A-204ENST00000450303 IFITM2Q01629 132 aa13.67□□□□□ -0.22
PRPF40A-204ENST00000450303 SCGB2B2Q4G0G5 96 aa13.67□□□□□ -0.22
PRPF40A-204ENST00000450303 C4orf46Q504U0 113 aa13.67□□□□□ -0.22
PRPF40A-204ENST00000450303 LPCAT3Q6P1A2 487 aa13.67□□□□□ -0.22
PRPF40A-204ENST00000450303 LINC00311Q8N616 119 aa13.67□□□□□ -0.22
PRPF40A-204ENST00000450303 KLHDC1Q8N7A1 406 aa13.67□□□□□ -0.22
PRPF40A-204ENST00000450303 FAM110DQ8TAY7 271 aaPredicted RBP13.67□□□□□ -0.22
PRPF40A-204ENST00000450303 SCGB3A2Q96PL1 93 aa13.67□□□□□ -0.22
PRPF40A-204ENST00000450303 ABHD14AQ9BUJ0 271 aa13.67□□□□□ -0.22
PRPF40A-204ENST00000450303 PSG11Q9UQ72 335 aa13.67□□□□□ -0.22
PRPF40A-204ENST00000450303 AMMECR1Q9Y4X0 333 aaPredicted RBP13.67□□□□□ -0.22
PRPF40A-204ENST00000450303 HSPB11Q9Y547 144 aa13.67□□□□□ -0.22
PRPF40A-204ENST00000450303 VWFP04275 2813 aa13.67□□□□□ -0.22
PRPF40A-204ENST00000450303 TUSC2O75896 110 aa13.66□□□□□ -0.22
PRPF40A-204ENST00000450303 SLC22A5O76082 557 aa13.66□□□□□ -0.22
PRPF40A-204ENST00000450303 PPYP01298 95 aa13.66□□□□□ -0.22
PRPF40A-204ENST00000450303 AADACP22760 399 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms