RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 LIN7CQ9NUP9 197 aaKnown RBP11.95□□□□□ -0.5
ERCC3-203ENST00000445889 MKRN2OSH3BPM6 223 aa11.95□□□□□ -0.5
ERCC3-203ENST00000445889 TCAPO15273 167 aa11.95□□□□□ -0.5
ERCC3-203ENST00000445889 MPLP40238 635 aa11.95□□□□□ -0.5
ERCC3-203ENST00000445889 TCF23Q7RTU1 214 aa11.95□□□□□ -0.5
ERCC3-203ENST00000445889 MRGPRDQ8TDS7 321 aa11.95□□□□□ -0.5
ERCC3-203ENST00000445889 NDUFAF3Q9BU61 184 aa11.95□□□□□ -0.5
ERCC3-203ENST00000445889 ACTR3CQ9C0K3 210 aaPredicted RBP11.95□□□□□ -0.5
ERCC3-203ENST00000445889 ZNF703Q9H7S9 590 aaPredicted RBP11.95□□□□□ -0.5
ERCC3-203ENST00000445889 CBLN4Q9NTU7 201 aa11.95□□□□□ -0.5
ERCC3-203ENST00000445889 BOKQ9UMX3 212 aaPredicted RBP11.95□□□□□ -0.5
ERCC3-203ENST00000445889 NUPR1O60356 82 aa11.94□□□□□ -0.5
ERCC3-203ENST00000445889 ATP5G3P48201 142 aa11.94□□□□□ -0.5
ERCC3-203ENST00000445889 EDDM3BP56851 147 aa11.94□□□□□ -0.5
ERCC3-203ENST00000445889 BRWD1-AS2P59051 145 aa11.94□□□□□ -0.5
ERCC3-203ENST00000445889 PAX5Q02548 391 aa11.94□□□□□ -0.5
ERCC3-203ENST00000445889 SLC10A1Q14973 349 aa11.94□□□□□ -0.5
ERCC3-203ENST00000445889 ZNF497Q6ZNH5 498 aa11.94□□□□□ -0.5
ERCC3-203ENST00000445889 RNASEH2CQ8TDP1 164 aaKnown RBP11.94□□□□□ -0.5
ERCC3-203ENST00000445889 PYGO2Q9BRQ0 406 aa11.94□□□□□ -0.5
ERCC3-203ENST00000445889 PCSK5Q92824 1860 aa11.94□□□□□ -0.5
ERCC3-203ENST00000445889 CASP6P55212 293 aa11.94□□□□□ -0.5
ERCC3-203ENST00000445889 DCAF12Q5T6F0 453 aa11.94□□□□□ -0.5
ERCC3-203ENST00000445889 TMEM256Q8N2U0 113 aa11.94□□□□□ -0.5
ERCC3-203ENST00000445889 TMEM251Q8N6I4 163 aa11.94□□□□□ -0.5
ERCC3-203ENST00000445889 ZNF114Q8NC26 417 aa11.94□□□□□ -0.5
ERCC3-203ENST00000445889 TMEM45BQ96B21 275 aa11.94□□□□□ -0.5
ERCC3-203ENST00000445889 C2orf88Q9BSF0 95 aa11.94□□□□□ -0.5
ERCC3-203ENST00000445889 TTTY12Q9BZ98 90 aa11.94□□□□□ -0.5
ERCC3-203ENST00000445889 RP1L1Q8IWN7 2480 aaPredicted RBP11.94□□□□□ -0.5
ERCC3-203ENST00000445889 C1QTNF9P0C862 333 aa11.93□□□□□ -0.5
ERCC3-203ENST00000445889 DNLZQ5SXM8 178 aa11.93□□□□□ -0.5
ERCC3-203ENST00000445889 TMEM14EPQ6UXP3 125 aa11.93□□□□□ -0.5
ERCC3-203ENST00000445889 VKORC1L1Q8N0U8 176 aa11.93□□□□□ -0.5
ERCC3-203ENST00000445889 TMEM170AQ8WVE7 144 aa11.93□□□□□ -0.5
ERCC3-203ENST00000445889 CTXND1A0A1B0GTU2 59 aa11.93□□□□□ -0.5
ERCC3-203ENST00000445889 ZNF320A2RRD8 509 aa11.93□□□□□ -0.5
ERCC3-203ENST00000445889 C11orf94C9JXX5 98 aa11.93□□□□□ -0.5
ERCC3-203ENST00000445889 NDUFB4O95168 129 aa11.93□□□□□ -0.5
ERCC3-203ENST00000445889 SERPINA7P05543 415 aa11.93□□□□□ -0.5
ERCC3-203ENST00000445889 SSTR5P35346 364 aa11.93□□□□□ -0.5
ERCC3-203ENST00000445889 TGFBR3Q03167 851 aa11.93□□□□□ -0.5
ERCC3-203ENST00000445889 OR1C1Q15619 314 aa11.93□□□□□ -0.5
ERCC3-203ENST00000445889 TEX38Q6PEX7 206 aa11.93□□□□□ -0.5
ERCC3-203ENST00000445889 GCNT2Q8N0V5 402 aa11.93□□□□□ -0.5
ERCC3-203ENST00000445889 OR10P1Q8NGE3 313 aa11.93□□□□□ -0.5
ERCC3-203ENST00000445889 TMEM18Q96B42 140 aa11.93□□□□□ -0.5
ERCC3-203ENST00000445889 AGMATQ9BSE5 352 aa11.93□□□□□ -0.5
ERCC3-203ENST00000445889 LOXL2Q9Y4K0 774 aa11.93□□□□□ -0.5
ERCC3-203ENST00000445889 IGKV3D-15A0A087WSY6 115 aa11.93□□□□□ -0.5
ERCC3-203ENST00000445889 LRP5LA4QPB2 252 aa11.93□□□□□ -0.5
ERCC3-203ENST00000445889 C12orf77C9JDV5 145 aa11.93□□□□□ -0.5
ERCC3-203ENST00000445889 ABHD17BQ5VST6 288 aa11.93□□□□□ -0.5
ERCC3-203ENST00000445889 ALKBH2Q6NS38 261 aa11.93□□□□□ -0.5
ERCC3-203ENST00000445889 Q6ZR03 302 aa11.93□□□□□ -0.5
ERCC3-203ENST00000445889 DTD1Q8TEA8 209 aa11.93□□□□□ -0.5
ERCC3-203ENST00000445889 OR6C3Q9NZP0 311 aa11.93□□□□□ -0.5
ERCC3-203ENST00000445889 METRNQ9UJH8 293 aa11.93□□□□□ -0.5
ERCC3-203ENST00000445889 MPC1Q9Y5U8 109 aa11.93□□□□□ -0.5
ERCC3-203ENST00000445889 GRIFINA4D1Z8 144 aa11.92□□□□□ -0.5
ERCC3-203ENST00000445889 B4E171 279 aa11.92□□□□□ -0.5
ERCC3-203ENST00000445889 TMEM250H0YL14 139 aa11.92□□□□□ -0.5
ERCC3-203ENST00000445889 J3QT63 122 aa11.92□□□□□ -0.5
ERCC3-203ENST00000445889 PAX1P15863 534 aa11.92□□□□□ -0.5
ERCC3-203ENST00000445889 HOXA6P31267 233 aa11.92□□□□□ -0.5
ERCC3-203ENST00000445889 ARR3P36575 388 aa11.92□□□□□ -0.5
ERCC3-203ENST00000445889 TSPAN7P41732 249 aa11.92□□□□□ -0.5
ERCC3-203ENST00000445889 GABRA2P47869 451 aa11.92□□□□□ -0.5
ERCC3-203ENST00000445889 ZNF709Q8N972 641 aa11.92□□□□□ -0.5
ERCC3-203ENST00000445889 NOL4LQ96MY1 436 aaPredicted RBP11.92□□□□□ -0.5
ERCC3-203ENST00000445889 NPCDR1Q9BY65 106 aa11.92□□□□□ -0.5
ERCC3-203ENST00000445889 OR5B21A6NL26 309 aa11.92□□□□□ -0.5
ERCC3-203ENST00000445889 LRRC30A6NM36 301 aa11.92□□□□□ -0.5
ERCC3-203ENST00000445889 SS18L1O75177 396 aaPredicted RBP11.92□□□□□ -0.5
ERCC3-203ENST00000445889 GCGP01275 180 aa11.92□□□□□ -0.5
ERCC3-203ENST00000445889 THBS3P49746 956 aa11.92□□□□□ -0.5
ERCC3-203ENST00000445889 ACTL10Q5JWF8 245 aa11.92□□□□□ -0.5
ERCC3-203ENST00000445889 C6orf15Q6UXA7 325 aaPredicted RBP11.92□□□□□ -0.5
ERCC3-203ENST00000445889 TGIF2LYQ8IUE0 185 aa11.92□□□□□ -0.5
ERCC3-203ENST00000445889 TRBV6-6A0A0A6YYG2 114 aa11.91□□□□□ -0.5
ERCC3-203ENST00000445889 LINC00473A8K010 186 aa11.91□□□□□ -0.5
ERCC3-203ENST00000445889 LYZL6O75951 148 aa11.91□□□□□ -0.5
ERCC3-203ENST00000445889 CYC1P08574 325 aa11.91□□□□□ -0.5
ERCC3-203ENST00000445889 IL3RAP26951 378 aa11.91□□□□□ -0.5
ERCC3-203ENST00000445889 CNN1P51911 297 aaKnown RBP11.91□□□□□ -0.5
ERCC3-203ENST00000445889 NEIL1Q96FI4 390 aaPredicted RBP11.91□□□□□ -0.5
ERCC3-203ENST00000445889 COX5AP20674 150 aa11.91□□□□□ -0.5
ERCC3-203ENST00000445889 SSPNQ14714 243 aa11.91□□□□□ -0.5
ERCC3-203ENST00000445889 ACY3Q96HD9 319 aa11.91□□□□□ -0.5
ERCC3-203ENST00000445889 FAM173AQ9BQD7 235 aa11.91□□□□□ -0.5
ERCC3-203ENST00000445889 LINC00470Q9BZP3 86 aa11.91□□□□□ -0.5
ERCC3-203ENST00000445889 OBP2BQ9NPH6 170 aa11.91□□□□□ -0.5
ERCC3-203ENST00000445889 TP53TG5Q9Y2B4 290 aa11.91□□□□□ -0.5
ERCC3-203ENST00000445889 TRAPPC1Q9Y5R8 145 aa11.91□□□□□ -0.5
ERCC3-203ENST00000445889 CADP27708 2225 aa11.91□□□□□ -0.5
ERCC3-203ENST00000445889 PMS2P5A8MQ11 134 aa11.9□□□□□ -0.5
ERCC3-203ENST00000445889 HBZP02008 142 aa11.9□□□□□ -0.5
ERCC3-203ENST00000445889 GCH1P30793 250 aa11.9□□□□□ -0.5
ERCC3-203ENST00000445889 GALMQ96C23 342 aa11.9□□□□□ -0.5
ERCC3-203ENST00000445889 TMEM147Q9BVK8 224 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms