RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 CLEC9AQ6UXN8 241 aa12.19□□□□□ -0.46
CCNE1-203ENST00000444983 TBC1D26Q86UD7 250 aa12.19□□□□□ -0.46
CCNE1-203ENST00000444983 TGIF2LXQ8IUE1 241 aa12.19□□□□□ -0.46
CCNE1-203ENST00000444983 CFHR4Q92496 578 aa12.19□□□□□ -0.46
CCNE1-203ENST00000444983 NABP2Q9BQ15 211 aa12.19□□□□□ -0.46
CCNE1-203ENST00000444983 MRPL20Q9BYC9 149 aaKnown RBP12.19□□□□□ -0.46
CCNE1-203ENST00000444983 GSX1Q9H4S2 264 aaPredicted RBP12.19□□□□□ -0.46
CCNE1-203ENST00000444983 HILPDAQ9Y5L2 63 aa12.19□□□□□ -0.46
CCNE1-203ENST00000444983 CRYM-AS1A6NIL9 109 aa12.18□□□□□ -0.46
CCNE1-203ENST00000444983 PEX14O75381 377 aa12.18□□□□□ -0.46
CCNE1-203ENST00000444983 RLN1P04808 185 aa12.18□□□□□ -0.46
CCNE1-203ENST00000444983 F2RP25116 425 aa12.18□□□□□ -0.46
CCNE1-203ENST00000444983 PAX6P26367 422 aa12.18□□□□□ -0.46
CCNE1-203ENST00000444983 UBE2MP61081 183 aaKnown RBP12.18□□□□□ -0.46
CCNE1-203ENST00000444983 TMED4Q7Z7H5 227 aa12.18□□□□□ -0.46
CCNE1-203ENST00000444983 OR8H3Q8N146 312 aa12.18□□□□□ -0.46
CCNE1-203ENST00000444983 CAPSLQ8WWF8 208 aa12.18□□□□□ -0.46
CCNE1-203ENST00000444983 GALNT14Q96FL9 552 aa12.18□□□□□ -0.46
CCNE1-203ENST00000444983 VSIG10L2P0DP72 767 aa12.17□□□□□ -0.46
CCNE1-203ENST00000444983 ANXA7P20073 488 aaKnown RBP12.17□□□□□ -0.46
CCNE1-203ENST00000444983 KCTD9Q7L273 389 aa12.17□□□□□ -0.46
CCNE1-203ENST00000444983 BCL6BQ8N143 479 aaPredicted RBP12.17□□□□□ -0.46
CCNE1-203ENST00000444983 CCDC71LQ8N9Z2 235 aa12.17□□□□□ -0.46
CCNE1-203ENST00000444983 MINDY2Q8NBR6 621 aa12.17□□□□□ -0.46
CCNE1-203ENST00000444983 ADTRPQ96IZ2 230 aa12.17□□□□□ -0.46
CCNE1-203ENST00000444983 PRDM13Q9H4Q3 707 aa12.17□□□□□ -0.46
CCNE1-203ENST00000444983 FAM90A9PA6NNJ1 464 aa12.16□□□□□ -0.46
CCNE1-203ENST00000444983 INMT-MINDY4F8WBC2 141 aa12.16□□□□□ -0.46
CCNE1-203ENST00000444983 H0YJW9 148 aa12.16□□□□□ -0.46
CCNE1-203ENST00000444983 OR4E1P0C645 316 aa12.16□□□□□ -0.46
CCNE1-203ENST00000444983 AKR1C4P17516 323 aa12.16□□□□□ -0.46
CCNE1-203ENST00000444983 THBS3P49746 956 aa12.16□□□□□ -0.46
CCNE1-203ENST00000444983 TAS2R31P59538 309 aa12.16□□□□□ -0.46
CCNE1-203ENST00000444983 CCDC144NLQ6NUI1 221 aa12.16□□□□□ -0.46
CCNE1-203ENST00000444983 GLDNQ6ZMI3 551 aaPredicted RBP12.16□□□□□ -0.46
CCNE1-203ENST00000444983 IL17RELQ6ZVW7 336 aa12.16□□□□□ -0.46
CCNE1-203ENST00000444983 NAA60Q9H7X0 242 aa12.16□□□□□ -0.46
CCNE1-203ENST00000444983 FAM212BQ9NTI7 297 aaPredicted RBP12.16□□□□□ -0.46
CCNE1-203ENST00000444983 C3orf85A0A1B0GTC6 90 aa12.16□□□□□ -0.46
CCNE1-203ENST00000444983 S100GP29377 79 aa12.16□□□□□ -0.46
CCNE1-203ENST00000444983 DYNLT3P51808 116 aa12.16□□□□□ -0.46
CCNE1-203ENST00000444983 TAGLNQ01995 201 aaKnown RBP12.16□□□□□ -0.46
CCNE1-203ENST00000444983 PPP1R1AQ13522 171 aa12.16□□□□□ -0.46
CCNE1-203ENST00000444983 TRIM16LQ309B1 348 aa12.16□□□□□ -0.46
CCNE1-203ENST00000444983 TCTEX1D1Q8N7M0 179 aa12.16□□□□□ -0.46
CCNE1-203ENST00000444983 OR51H1Q8NH63 302 aa12.16□□□□□ -0.46
CCNE1-203ENST00000444983 GLYATL2Q8WU03 294 aa12.16□□□□□ -0.46
CCNE1-203ENST00000444983 TP53RKQ96S44 253 aa12.16□□□□□ -0.46
CCNE1-203ENST00000444983 MS4A7Q9GZW8 240 aaPredicted RBP12.16□□□□□ -0.46
CCNE1-203ENST00000444983 A0A0B4J293 547 aa12.15□□□□□ -0.46
CCNE1-203ENST00000444983 RNF212BA8MTL3 300 aa12.15□□□□□ -0.46
CCNE1-203ENST00000444983 H0Y980 276 aa12.15□□□□□ -0.46
CCNE1-203ENST00000444983 TIMM23O14925 209 aa12.15□□□□□ -0.46
CCNE1-203ENST00000444983 RBFOX2O43251 390 aaKnown RBP eCLIP12.15□□□□□ -0.46
CCNE1-203ENST00000444983 MC5RP33032 325 aa12.15□□□□□ -0.46
CCNE1-203ENST00000444983 RAB25P57735 213 aa12.15□□□□□ -0.46
CCNE1-203ENST00000444983 CATR1Q13166 79 aa12.15□□□□□ -0.46
CCNE1-203ENST00000444983 DHRS2Q13268 280 aa12.15□□□□□ -0.46
CCNE1-203ENST00000444983 EBI3Q14213 229 aa12.15□□□□□ -0.46
CCNE1-203ENST00000444983 AANATQ16613 207 aa12.15□□□□□ -0.46
CCNE1-203ENST00000444983 ZNF585BQ52M93 769 aa12.15□□□□□ -0.46
CCNE1-203ENST00000444983 SGPP2Q8IWX5 399 aa12.15□□□□□ -0.46
CCNE1-203ENST00000444983 PIFOQ8TCI5 191 aa12.15□□□□□ -0.46
CCNE1-203ENST00000444983 ANK3Q12955 4377 aaKnown RBP12.15□□□□□ -0.47
CCNE1-203ENST00000444983 TEX13DA0A0J9YY54 714 aaPredicted RBP12.14□□□□□ -0.47
CCNE1-203ENST00000444983 C9orf170A2RU37 121 aa12.14□□□□□ -0.47
CCNE1-203ENST00000444983 RAMP3O60896 148 aa12.14□□□□□ -0.47
CCNE1-203ENST00000444983 B3GALNT1O75752 331 aa12.14□□□□□ -0.47
CCNE1-203ENST00000444983 IGKV1-16P04430 117 aa12.14□□□□□ -0.47
CCNE1-203ENST00000444983 IL5P05113 134 aa12.14□□□□□ -0.47
CCNE1-203ENST00000444983 FBP1P09467 338 aa12.14□□□□□ -0.47
CCNE1-203ENST00000444983 OR5AC1P0C628 307 aa12.14□□□□□ -0.47
CCNE1-203ENST00000444983 UCP1P25874 307 aa12.14□□□□□ -0.47
CCNE1-203ENST00000444983 CD1BP29016 333 aa12.14□□□□□ -0.47
CCNE1-203ENST00000444983 DEFB112Q30KQ8 113 aa12.14□□□□□ -0.47
CCNE1-203ENST00000444983 MOB3BQ86TA1 216 aa12.14□□□□□ -0.47
CCNE1-203ENST00000444983 TCTEX1D2Q8WW35 142 aa12.14□□□□□ -0.47
CCNE1-203ENST00000444983 C22orf15Q8WYQ4 148 aa12.14□□□□□ -0.47
CCNE1-203ENST00000444983 RBMXL1Q96E39 390 aaKnown RBP12.14□□□□□ -0.47
CCNE1-203ENST00000444983 ZNF48Q96MX3 618 aaPredicted RBP12.14□□□□□ -0.47
CCNE1-203ENST00000444983 BEX2Q9BXY8 128 aa12.14□□□□□ -0.47
CCNE1-203ENST00000444983 TMEM222Q9H0R3 208 aa12.14□□□□□ -0.47
CCNE1-203ENST00000444983 BEX1Q9HBH7 125 aa12.14□□□□□ -0.47
CCNE1-203ENST00000444983 LIN7CQ9NUP9 197 aaKnown RBP12.14□□□□□ -0.47
CCNE1-203ENST00000444983 FAM96BQ9Y3D0 163 aa12.14□□□□□ -0.47
CCNE1-203ENST00000444983 FN1P02751 2386 aaKnown RBP12.14□□□□□ -0.47
CCNE1-203ENST00000444983 SFT2D2O95562 160 aa12.13□□□□□ -0.47
CCNE1-203ENST00000444983 CDS2O95674 445 aa12.13□□□□□ -0.47
CCNE1-203ENST00000444983 HNF1AP20823 631 aa12.13□□□□□ -0.47
CCNE1-203ENST00000444983 TMEM187Q14656 261 aa12.13□□□□□ -0.47
CCNE1-203ENST00000444983 SP6Q3SY56 376 aa12.13□□□□□ -0.47
CCNE1-203ENST00000444983 FBLN7Q53RD9 439 aa12.13□□□□□ -0.47
CCNE1-203ENST00000444983 Q71RC1 249 aaPredicted RBP12.13□□□□□ -0.47
CCNE1-203ENST00000444983 LYG2Q86SG7 212 aa12.13□□□□□ -0.47
CCNE1-203ENST00000444983 THNSL2Q86YJ6 484 aa12.13□□□□□ -0.47
CCNE1-203ENST00000444983 SPAG16Q8N0X2 631 aa12.13□□□□□ -0.47
CCNE1-203ENST00000444983 CDC42EP3Q9UKI2 254 aa12.13□□□□□ -0.47
CCNE1-203ENST00000444983 KCNIP3Q9Y2W7 256 aa12.13□□□□□ -0.47
CCNE1-203ENST00000444983 PRELID3BQ9Y3B1 194 aa12.13□□□□□ -0.47
CCNE1-203ENST00000444983 IGHV3-72A0A0B4J1Y9 119 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms