RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 TMX2-CTNND1H3BSU7 103 aa3.29□□□□□ -1.88
VPS50-206ENST00000443443 DNASE2O00115 360 aaPredicted RBP3.29□□□□□ -1.88
VPS50-206ENST00000443443 LGALS9O00182 355 aa3.29□□□□□ -1.88
VPS50-206ENST00000443443 PIRO00625 290 aa3.29□□□□□ -1.88
VPS50-206ENST00000443443 MRASO14807 208 aa3.29□□□□□ -1.88
VPS50-206ENST00000443443 TNFSF13O75888 250 aa3.29□□□□□ -1.88
VPS50-206ENST00000443443 GABARAPO95166 117 aa3.29□□□□□ -1.88
VPS50-206ENST00000443443 IFNGP01579 166 aa3.29□□□□□ -1.88
VPS50-206ENST00000443443 HTR1AP08908 422 aa3.29□□□□□ -1.88
VPS50-206ENST00000443443 UBBP0CG47 229 aa3.29□□□□□ -1.88
VPS50-206ENST00000443443 SMIM6P0DI80 62 aa3.29□□□□□ -1.88
VPS50-206ENST00000443443 TDGF1P13385 188 aa3.29□□□□□ -1.88
VPS50-206ENST00000443443 CTSEP14091 401 aa3.29□□□□□ -1.88
VPS50-206ENST00000443443 ZNF19P17023 458 aa3.29□□□□□ -1.88
VPS50-206ENST00000443443 CCL1P22362 96 aa3.29□□□□□ -1.88
VPS50-206ENST00000443443 IL3RAP26951 378 aa3.29□□□□□ -1.88
VPS50-206ENST00000443443 PSMB3P49720 205 aa3.29□□□□□ -1.88
VPS50-206ENST00000443443 TDGF1P3P51864 188 aa3.29□□□□□ -1.88
VPS50-206ENST00000443443 GABARAPL2P60520 117 aa3.29□□□□□ -1.88
VPS50-206ENST00000443443 CAV1Q03135 178 aa3.29□□□□□ -1.88
VPS50-206ENST00000443443 BTN1A1Q13410 526 aa3.29□□□□□ -1.88
VPS50-206ENST00000443443 OR8B8Q15620 311 aa3.29□□□□□ -1.88
VPS50-206ENST00000443443 C12orf74Q32Q52 190 aa3.29□□□□□ -1.88
VPS50-206ENST00000443443 TIMM50Q3ZCQ8 353 aa3.29□□□□□ -1.88
VPS50-206ENST00000443443 SCGB2B2Q4G0G5 96 aa3.29□□□□□ -1.88
VPS50-206ENST00000443443 CASC10Q5T4H9 136 aa3.29□□□□□ -1.88
VPS50-206ENST00000443443 SHISA6Q6ZSJ9 500 aa3.29□□□□□ -1.88
VPS50-206ENST00000443443 FAM19A3Q7Z5A8 133 aa3.29□□□□□ -1.88
VPS50-206ENST00000443443 PRNTQ86SH4 94 aa3.29□□□□□ -1.88
VPS50-206ENST00000443443 TMEM75Q8N9X5 138 aa3.29□□□□□ -1.88
VPS50-206ENST00000443443 OR1J4Q8NGS1 313 aa3.29□□□□□ -1.88
VPS50-206ENST00000443443 OR2T27Q8NH04 317 aa3.29□□□□□ -1.88
VPS50-206ENST00000443443 OR52P1PQ8NH57 321 aa3.29□□□□□ -1.88
VPS50-206ENST00000443443 OR1L1Q8NH94 360 aa3.29□□□□□ -1.88
VPS50-206ENST00000443443 OR5P3Q8WZ94 311 aa3.29□□□□□ -1.88
VPS50-206ENST00000443443 PTX4Q96A99 478 aa3.29□□□□□ -1.88
VPS50-206ENST00000443443 APOBEC3DQ96AK3 386 aaPredicted RBP3.29□□□□□ -1.88
VPS50-206ENST00000443443 PLEKHB2Q96CS7 222 aa3.29□□□□□ -1.88
VPS50-206ENST00000443443 TMEM101Q96IK0 257 aa3.29□□□□□ -1.88
VPS50-206ENST00000443443 GPR82Q96P67 336 aa3.29□□□□□ -1.88
VPS50-206ENST00000443443 PAXXQ9BUH6 204 aa3.29□□□□□ -1.88
VPS50-206ENST00000443443 GGACTQ9BVM4 153 aa3.29□□□□□ -1.88
VPS50-206ENST00000443443 TBL1XR1Q9BZK7 514 aa3.29□□□□□ -1.88
VPS50-206ENST00000443443 PBOV1Q9GZY1 135 aa3.29□□□□□ -1.88
VPS50-206ENST00000443443 CALML5Q9NZT1 146 aa3.29□□□□□ -1.88
VPS50-206ENST00000443443 COL16A1Q07092 1604 aaPredicted RBP3.29□□□□□ -1.88
VPS50-206ENST00000443443 WDR62O43379 1518 aa3.29□□□□□ -1.88
VPS50-206ENST00000443443 A0A087WX48 190 aa3.28□□□□□ -1.88
VPS50-206ENST00000443443 CCL15-CCL14A0A0B4J2E2 113 aa3.28□□□□□ -1.88
VPS50-206ENST00000443443 IGHV3-35A0A0C4DH35 117 aa3.28□□□□□ -1.88
VPS50-206ENST00000443443 A0A1B0GX51 115 aa3.28□□□□□ -1.88
VPS50-206ENST00000443443 EPOPA6NHQ4 379 aa3.28□□□□□ -1.88
VPS50-206ENST00000443443 SIGLEC16A6NMB1 481 aa3.28□□□□□ -1.88
VPS50-206ENST00000443443 RIIAD1A6NNX1 92 aa3.28□□□□□ -1.88
VPS50-206ENST00000443443 B4DEV8 164 aa3.28□□□□□ -1.88
VPS50-206ENST00000443443 TMEM250H0YL14 139 aa3.28□□□□□ -1.88
VPS50-206ENST00000443443 ISLRO14498 428 aa3.28□□□□□ -1.88
VPS50-206ENST00000443443 ZNF207O43670 478 aaKnown RBP3.28□□□□□ -1.88
VPS50-206ENST00000443443 ZNF253O75346 499 aa3.28□□□□□ -1.88
VPS50-206ENST00000443443 PIAS1O75925 651 aa3.28□□□□□ -1.88
VPS50-206ENST00000443443 GYPCP04921 128 aa3.28□□□□□ -1.88
VPS50-206ENST00000443443 MPC1LP0DKB6 136 aa3.28□□□□□ -1.88
VPS50-206ENST00000443443 ORM2P19652 201 aa3.28□□□□□ -1.88
VPS50-206ENST00000443443 IMPA1P29218 277 aa3.28□□□□□ -1.88
VPS50-206ENST00000443443 OR10J1P30954 320 aa3.28□□□□□ -1.88
VPS50-206ENST00000443443 G6PCP35575 357 aa3.28□□□□□ -1.88
VPS50-206ENST00000443443 CD200P41217 278 aa3.28□□□□□ -1.88
VPS50-206ENST00000443443 INPP1P49441 399 aa3.28□□□□□ -1.88
VPS50-206ENST00000443443 ZNF140P52738 457 aaPredicted RBP3.28□□□□□ -1.88
VPS50-206ENST00000443443 PPP1CAP62136 330 aa3.28□□□□□ -1.88
VPS50-206ENST00000443443 RAP1AP62834 184 aa3.28□□□□□ -1.88
VPS50-206ENST00000443443 HERVK_113P63121 156 aa3.28□□□□□ -1.88
VPS50-206ENST00000443443 CXCL6P80162 114 aa3.28□□□□□ -1.88
VPS50-206ENST00000443443 IGLV3-21P80748 117 aaPredicted RBP3.28□□□□□ -1.88
VPS50-206ENST00000443443 CCL15Q16663 113 aa3.28□□□□□ -1.88
VPS50-206ENST00000443443 TCF23Q7RTU1 214 aa3.28□□□□□ -1.88
VPS50-206ENST00000443443 ZNF615Q8N8J6 731 aa3.28□□□□□ -1.88
VPS50-206ENST00000443443 OR5A1Q8NGJ0 315 aa3.28□□□□□ -1.88
VPS50-206ENST00000443443 OR13C4Q8NGS5 318 aa3.28□□□□□ -1.88
VPS50-206ENST00000443443 GPR119Q8TDV5 335 aa3.28□□□□□ -1.88
VPS50-206ENST00000443443 THEM6Q8WUY1 208 aa3.28□□□□□ -1.88
VPS50-206ENST00000443443 FRZBQ92765 325 aa3.28□□□□□ -1.88
VPS50-206ENST00000443443 KLK6Q92876 244 aa3.28□□□□□ -1.88
VPS50-206ENST00000443443 TSPAN32Q96QS1 320 aa3.28□□□□□ -1.88
VPS50-206ENST00000443443 NMNAT3Q96T66 252 aa3.28□□□□□ -1.88
VPS50-206ENST00000443443 NRIP2Q9BQI9 281 aa3.28□□□□□ -1.88
VPS50-206ENST00000443443 ZNF649Q9BS31 505 aa3.28□□□□□ -1.88
VPS50-206ENST00000443443 MND1Q9BWT6 205 aa3.28□□□□□ -1.88
VPS50-206ENST00000443443 SAMD10Q9BYL1 202 aa3.28□□□□□ -1.88
VPS50-206ENST00000443443 ZNF436Q9C0F3 470 aaPredicted RBP3.28□□□□□ -1.88
VPS50-206ENST00000443443 ANAPC11Q9NYG5 84 aa3.28□□□□□ -1.88
VPS50-206ENST00000443443 DHCR7Q9UBM7 475 aaKnown RBP3.28□□□□□ -1.88
VPS50-206ENST00000443443 ANAPC10Q9UM13 185 aa3.28□□□□□ -1.88
VPS50-206ENST00000443443 DNMT1P26358 1616 aaKnown RBP3.28□□□□□ -1.88
VPS50-206ENST00000443443 BICRAQ9NZM4 1560 aa3.28□□□□□ -1.88
VPS50-206ENST00000443443 PDS5BQ9NTI5 1447 aa3.27□□□□□ -1.89
VPS50-206ENST00000443443 TRAV36DV7A0A075B6V5 113 aa3.27□□□□□ -1.89
VPS50-206ENST00000443443 IGHV3-74A0A0B4J1X5 117 aa3.27□□□□□ -1.89
VPS50-206ENST00000443443 IGHV1-69-2A0A0G2JMI3 117 aa3.27□□□□□ -1.89
VPS50-206ENST00000443443 A0A0J9YXY3 114 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms