RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 CX3CL1P78423 397 aa16.47■□□□□ 0.23
CDKN3-204ENST00000442975 PSG5Q15238 335 aa16.47■□□□□ 0.23
CDKN3-204ENST00000442975 SRSF7Q16629 238 aaKnown RBP eCLIP16.47■□□□□ 0.23
CDKN3-204ENST00000442975 Q6ZS49 121 aa16.47■□□□□ 0.23
CDKN3-204ENST00000442975 REC114Q7Z4M0 266 aa16.47■□□□□ 0.23
CDKN3-204ENST00000442975 RNF152Q8N8N0 203 aa16.47■□□□□ 0.23
CDKN3-204ENST00000442975 SLC25A38Q96DW6 304 aa16.47■□□□□ 0.23
CDKN3-204ENST00000442975 C5orf30Q96GV9 206 aa16.47■□□□□ 0.23
CDKN3-204ENST00000442975 AURKAIP1Q9NWT8 199 aaPredicted RBP16.47■□□□□ 0.23
CDKN3-204ENST00000442975 CCL24O00175 119 aa16.46■□□□□ 0.23
CDKN3-204ENST00000442975 AIREO43918 545 aa16.46■□□□□ 0.23
CDKN3-204ENST00000442975 DUS4LO95620 317 aaKnown RBP16.46■□□□□ 0.23
CDKN3-204ENST00000442975 PITPNAQ00169 270 aa16.46■□□□□ 0.23
CDKN3-204ENST00000442975 CBX3Q13185 183 aa16.46■□□□□ 0.23
CDKN3-204ENST00000442975 H1FOOQ8IZA3 346 aaPredicted RBP16.46■□□□□ 0.23
CDKN3-204ENST00000442975 FLYWCH2Q96CP2 140 aaKnown RBP16.46■□□□□ 0.23
CDKN3-204ENST00000442975 P2RX4Q99571 388 aa16.46■□□□□ 0.23
CDKN3-204ENST00000442975 RNF5Q99942 180 aa16.46■□□□□ 0.23
CDKN3-204ENST00000442975 FBXO7Q9Y3I1 522 aa16.46■□□□□ 0.23
CDKN3-204ENST00000442975 TGP01266 2768 aa16.46■□□□□ 0.23
CDKN3-204ENST00000442975 TRAV18A0A075B6X5 111 aa16.45■□□□□ 0.22
CDKN3-204ENST00000442975 A0A1W2PN81 502 aa16.45■□□□□ 0.22
CDKN3-204ENST00000442975 FCN1O00602 326 aa16.45■□□□□ 0.22
CDKN3-204ENST00000442975 SLC25A17O43808 307 aa16.45■□□□□ 0.22
CDKN3-204ENST00000442975 SSX5O60225 188 aa16.45■□□□□ 0.22
CDKN3-204ENST00000442975 SPDEFO95238 335 aa16.45■□□□□ 0.22
CDKN3-204ENST00000442975 CA2P00918 260 aa16.45■□□□□ 0.22
CDKN3-204ENST00000442975 HOXD3P31249 432 aaPredicted RBP16.45■□□□□ 0.22
CDKN3-204ENST00000442975 CHRNA7P36544 502 aa16.45■□□□□ 0.22
CDKN3-204ENST00000442975 CDX1P47902 265 aaPredicted RBP16.45■□□□□ 0.22
CDKN3-204ENST00000442975 SCAND1P57086 179 aa16.45■□□□□ 0.22
CDKN3-204ENST00000442975 ZNF260Q3ZCT1 412 aa16.45■□□□□ 0.22
CDKN3-204ENST00000442975 ZNF660Q6AZW8 331 aaPredicted RBP16.45■□□□□ 0.22
CDKN3-204ENST00000442975 MRAPQ8TCY5 172 aa16.45■□□□□ 0.22
CDKN3-204ENST00000442975 C4orf3Q8WVX3 66 aa16.45■□□□□ 0.22
CDKN3-204ENST00000442975 DPF1Q92782 380 aa16.45■□□□□ 0.22
CDKN3-204ENST00000442975 HARBI1Q96MB7 349 aa16.45■□□□□ 0.22
CDKN3-204ENST00000442975 FAM103A1Q9BTL3 118 aaKnown RBP16.45■□□□□ 0.22
CDKN3-204ENST00000442975 DCSTAMPQ9H295 470 aa16.45■□□□□ 0.22
CDKN3-204ENST00000442975 KLK15Q9H2R5 256 aa16.45■□□□□ 0.22
CDKN3-204ENST00000442975 TPSG1Q9NRR2 321 aa16.45■□□□□ 0.22
CDKN3-204ENST00000442975 GAB2Q9UQC2 676 aa16.45■□□□□ 0.22
CDKN3-204ENST00000442975 NFYAP23511 347 aaPredicted RBP16.44■□□□□ 0.22
CDKN3-204ENST00000442975 PPIFP30405 207 aaKnown RBP16.44■□□□□ 0.22
CDKN3-204ENST00000442975 GNB1P62873 340 aa16.44■□□□□ 0.22
CDKN3-204ENST00000442975 RTL8BQ17RB0 113 aa16.44■□□□□ 0.22
CDKN3-204ENST00000442975 GRPEL2Q8TAA5 225 aa16.44■□□□□ 0.22
CDKN3-204ENST00000442975 YIPF6Q96EC8 236 aa16.44■□□□□ 0.22
CDKN3-204ENST00000442975 OR5B12Q96R08 314 aa16.44■□□□□ 0.22
CDKN3-204ENST00000442975 GPR61Q9BZJ8 451 aa16.44■□□□□ 0.22
CDKN3-204ENST00000442975 FOXA2Q9Y261 457 aaPredicted RBP16.44■□□□□ 0.22
CDKN3-204ENST00000442975 PPP1R27Q86WC6 154 aa16.43■□□□□ 0.22
CDKN3-204ENST00000442975 BVESQ8NE79 360 aa16.43■□□□□ 0.22
CDKN3-204ENST00000442975 CASTOR1Q8WTX7 329 aa16.43■□□□□ 0.22
CDKN3-204ENST00000442975 ARPC1AQ92747 370 aa16.43■□□□□ 0.22
CDKN3-204ENST00000442975 IGLV1-40P01703 118 aa16.42■□□□□ 0.22
CDKN3-204ENST00000442975 CTXN2P0C2S0 81 aa16.42■□□□□ 0.22
CDKN3-204ENST00000442975 ARPC4P59998 168 aa16.42■□□□□ 0.22
CDKN3-204ENST00000442975 MINDY2Q8NBR6 621 aa16.42■□□□□ 0.22
CDKN3-204ENST00000442975 MCRIP2Q9BUT9 160 aaKnown RBP16.42■□□□□ 0.22
CDKN3-204ENST00000442975 GNB4Q9HAV0 340 aa16.42■□□□□ 0.22
CDKN3-204ENST00000442975 ANXA10Q9UJ72 324 aa16.42■□□□□ 0.22
CDKN3-204ENST00000442975 VSIG4Q9Y279 399 aa16.42■□□□□ 0.22
CDKN3-204ENST00000442975 SHOXO15266 292 aa16.41■□□□□ 0.22
CDKN3-204ENST00000442975 FCER2P06734 321 aa16.41■□□□□ 0.22
CDKN3-204ENST00000442975 LUMP51884 338 aaPredicted RBP16.41■□□□□ 0.22
CDKN3-204ENST00000442975 ACTBL2Q562R1 376 aa16.41■□□□□ 0.22
CDKN3-204ENST00000442975 CNIH2Q6PI25 160 aa16.41■□□□□ 0.22
CDKN3-204ENST00000442975 UNQ5815/PRO19632Q6UWF5 114 aa16.41■□□□□ 0.22
CDKN3-204ENST00000442975 ZNF562Q6V9R5 426 aa16.41■□□□□ 0.22
CDKN3-204ENST00000442975 TCTEX1D1Q8N7M0 179 aa16.41■□□□□ 0.22
CDKN3-204ENST00000442975 MYOZ3Q8TDC0 251 aa16.41■□□□□ 0.22
CDKN3-204ENST00000442975 ADTRPQ96IZ2 230 aa16.41■□□□□ 0.22
CDKN3-204ENST00000442975 DIABLOQ9NR28 239 aa16.41■□□□□ 0.22
CDKN3-204ENST00000442975 SPATA2Q9UM82 520 aa16.41■□□□□ 0.22
CDKN3-204ENST00000442975 OR2W1Q9Y3N9 320 aa16.41■□□□□ 0.22
CDKN3-204ENST00000442975 A0A0A6YYH2 397 aa16.4■□□□□ 0.22
CDKN3-204ENST00000442975 A6NJ64 397 aa16.4■□□□□ 0.22
CDKN3-204ENST00000442975 SOX15O60248 233 aa16.4■□□□□ 0.22
CDKN3-204ENST00000442975 CNIH1O95406 144 aa16.4■□□□□ 0.22
CDKN3-204ENST00000442975 DUTP33316 252 aaKnown RBP16.4■□□□□ 0.22
CDKN3-204ENST00000442975 RAB9AP51151 201 aa16.4■□□□□ 0.22
CDKN3-204ENST00000442975 CRIP2P52943 208 aaPredicted RBP16.4■□□□□ 0.22
CDKN3-204ENST00000442975 TAGLNQ01995 201 aaKnown RBP16.4■□□□□ 0.22
CDKN3-204ENST00000442975 TMEM267Q0VDI3 215 aaPredicted RBP16.4■□□□□ 0.22
CDKN3-204ENST00000442975 C19orf54Q5BKX5 351 aa16.4■□□□□ 0.22
CDKN3-204ENST00000442975 CROCCP3Q8IVE0 287 aa16.4■□□□□ 0.22
CDKN3-204ENST00000442975 ZNF645Q8N7E2 425 aa16.4■□□□□ 0.22
CDKN3-204ENST00000442975 LFNGQ8NES3 379 aa16.4■□□□□ 0.22
CDKN3-204ENST00000442975 OR5M8Q8NGP6 311 aa16.4■□□□□ 0.22
CDKN3-204ENST00000442975 UBE2E2Q96LR5 201 aa16.4■□□□□ 0.22
CDKN3-204ENST00000442975 TUSC2O75896 110 aa16.39■□□□□ 0.21
CDKN3-204ENST00000442975 CRYZL1O95825 349 aa16.39■□□□□ 0.21
CDKN3-204ENST00000442975 IGLV2-23P01705 113 aa16.39■□□□□ 0.21
CDKN3-204ENST00000442975 RRASP10301 218 aa16.39■□□□□ 0.21
CDKN3-204ENST00000442975 EGR2P11161 476 aaPredicted RBP16.39■□□□□ 0.21
CDKN3-204ENST00000442975 PTHLHP12272 177 aa16.39■□□□□ 0.21
CDKN3-204ENST00000442975 RPS19P39019 145 aaKnown RBP16.39■□□□□ 0.21
CDKN3-204ENST00000442975 LGALS7P47929 136 aa16.39■□□□□ 0.21
CDKN3-204ENST00000442975 KRTAP10-11P60412 298 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms