RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 IFT22Q9H7X7 185 aa6.14□□□□□ -1.43
CDC42BPA-208ENST00000442054 F2RL2O00254 374 aa6.13□□□□□ -1.43
CDC42BPA-208ENST00000442054 JTBO76095 146 aa6.13□□□□□ -1.43
CDC42BPA-208ENST00000442054 KITLGP21583 273 aa6.13□□□□□ -1.43
CDC42BPA-208ENST00000442054 FCGR2CP31995 323 aa6.13□□□□□ -1.43
CDC42BPA-208ENST00000442054 LIAT1Q6ZQX7 453 aa6.13□□□□□ -1.43
CDC42BPA-208ENST00000442054 LYZL2Q7Z4W2 148 aa6.13□□□□□ -1.43
CDC42BPA-208ENST00000442054 OR10X1Q8NGY0 326 aa6.13□□□□□ -1.43
CDC42BPA-208ENST00000442054 DYRK2Q92630 601 aa6.13□□□□□ -1.43
CDC42BPA-208ENST00000442054 AKR1E2Q96JD6 320 aa6.13□□□□□ -1.43
CDC42BPA-208ENST00000442054 TP53RKQ96S44 253 aa6.13□□□□□ -1.43
CDC42BPA-208ENST00000442054 GCM1Q9NP62 436 aa6.13□□□□□ -1.43
CDC42BPA-208ENST00000442054 RFNGQ9Y644 331 aa6.13□□□□□ -1.43
CDC42BPA-208ENST00000442054 IGKV1-6A0A0C4DH72 117 aa6.13□□□□□ -1.43
CDC42BPA-208ENST00000442054 CYSRT1A8MQ03 144 aa6.13□□□□□ -1.43
CDC42BPA-208ENST00000442054 TMEM178BH3BS89 294 aa6.13□□□□□ -1.43
CDC42BPA-208ENST00000442054 PITX3O75364 302 aa6.13□□□□□ -1.43
CDC42BPA-208ENST00000442054 IL3RAP26951 378 aa6.13□□□□□ -1.43
CDC42BPA-208ENST00000442054 PRDX2P32119 198 aa6.13□□□□□ -1.43
CDC42BPA-208ENST00000442054 MEOX2P50222 304 aa6.13□□□□□ -1.43
CDC42BPA-208ENST00000442054 PAX9P55771 341 aa6.13□□□□□ -1.43
CDC42BPA-208ENST00000442054 FGF12P61328 243 aa6.13□□□□□ -1.43
CDC42BPA-208ENST00000442054 RND3P61587 244 aa6.13□□□□□ -1.43
CDC42BPA-208ENST00000442054 ZNF154Q13106 437 aa6.13□□□□□ -1.43
CDC42BPA-208ENST00000442054 PDZK1IP1Q13113 114 aa6.13□□□□□ -1.43
CDC42BPA-208ENST00000442054 LY6EQ16553 131 aa6.13□□□□□ -1.43
CDC42BPA-208ENST00000442054 IAH1Q2TAA2 248 aaPredicted RBP6.13□□□□□ -1.43
CDC42BPA-208ENST00000442054 NMSQ5H8A3 153 aa6.13□□□□□ -1.43
CDC42BPA-208ENST00000442054 ZNF880Q6PDB4 577 aa6.13□□□□□ -1.43
CDC42BPA-208ENST00000442054 EDARADDQ8WWZ3 215 aa6.13□□□□□ -1.43
CDC42BPA-208ENST00000442054 SAV1Q9H4B6 383 aaPredicted RBP6.13□□□□□ -1.43
CDC42BPA-208ENST00000442054 PLEKHA2Q9HB19 425 aa6.13□□□□□ -1.43
CDC42BPA-208ENST00000442054 ATMQ13315 3056 aa6.13□□□□□ -1.43
CDC42BPA-208ENST00000442054 FAM221AA4D161 298 aa6.13□□□□□ -1.43
CDC42BPA-208ENST00000442054 DVL1O14640 695 aa6.13□□□□□ -1.43
CDC42BPA-208ENST00000442054 IFNA4P05014 189 aa6.13□□□□□ -1.43
CDC42BPA-208ENST00000442054 HOXB5P09067 269 aa6.13□□□□□ -1.43
CDC42BPA-208ENST00000442054 FBP1P09467 338 aa6.13□□□□□ -1.43
CDC42BPA-208ENST00000442054 OR5AC1P0C628 307 aa6.13□□□□□ -1.43
CDC42BPA-208ENST00000442054 OR8U8P0C7N1 319 aa6.13□□□□□ -1.43
CDC42BPA-208ENST00000442054 GATA3P23771 443 aa6.13□□□□□ -1.43
CDC42BPA-208ENST00000442054 GNRHRP30968 328 aa6.13□□□□□ -1.43
CDC42BPA-208ENST00000442054 PDCD1Q15116 288 aa6.13□□□□□ -1.43
CDC42BPA-208ENST00000442054 SWI5Q1ZZU3 235 aa6.13□□□□□ -1.43
CDC42BPA-208ENST00000442054 PIGYQ3MUY2 71 aa6.13□□□□□ -1.43
CDC42BPA-208ENST00000442054 C5orf24Q7Z6I8 188 aa6.13□□□□□ -1.43
CDC42BPA-208ENST00000442054 COMMD1Q8N668 190 aa6.13□□□□□ -1.43
CDC42BPA-208ENST00000442054 FAM216BQ8N7L0 139 aa6.13□□□□□ -1.43
CDC42BPA-208ENST00000442054 SECTM1Q8WVN6 248 aa6.13□□□□□ -1.43
CDC42BPA-208ENST00000442054 HRH4Q9H3N8 390 aa6.13□□□□□ -1.43
CDC42BPA-208ENST00000442054 PLEKHJ1Q9NW61 149 aa6.13□□□□□ -1.43
CDC42BPA-208ENST00000442054 PPP1R14DQ9NXH3 145 aa6.13□□□□□ -1.43
CDC42BPA-208ENST00000442054 GEMIN2O14893 280 aaKnown RBP6.12□□□□□ -1.43
CDC42BPA-208ENST00000442054 CD5LO43866 347 aa6.12□□□□□ -1.43
CDC42BPA-208ENST00000442054 LILRA1O75019 489 aa6.12□□□□□ -1.43
CDC42BPA-208ENST00000442054 OR5H8P0DN80 308 aa6.12□□□□□ -1.43
CDC42BPA-208ENST00000442054 UCP1P25874 307 aa6.12□□□□□ -1.43
CDC42BPA-208ENST00000442054 BRS3P32247 399 aa6.12□□□□□ -1.43
CDC42BPA-208ENST00000442054 CALHM1Q8IU99 346 aa6.12□□□□□ -1.43
CDC42BPA-208ENST00000442054 RFESDQ8TAC1 157 aa6.12□□□□□ -1.43
CDC42BPA-208ENST00000442054 C12orf57Q99622 126 aa6.12□□□□□ -1.43
CDC42BPA-208ENST00000442054 SLC2A9Q9NRM0 540 aa6.12□□□□□ -1.43
CDC42BPA-208ENST00000442054 IGLV3-9A0A075B6K5 115 aa6.12□□□□□ -1.43
CDC42BPA-208ENST00000442054 SPINT2O43291 252 aa6.12□□□□□ -1.43
CDC42BPA-208ENST00000442054 GPR137BO60478 399 aa6.12□□□□□ -1.43
CDC42BPA-208ENST00000442054 MED6O75586 246 aa6.12□□□□□ -1.43
CDC42BPA-208ENST00000442054 PET100P0DJ07 73 aa6.12□□□□□ -1.43
CDC42BPA-208ENST00000442054 PIGPP57054 158 aa6.12□□□□□ -1.43
CDC42BPA-208ENST00000442054 CEACAM21Q3KPI0 293 aa6.12□□□□□ -1.43
CDC42BPA-208ENST00000442054 BRD3OSQ6XYD6 125 aa6.12□□□□□ -1.43
CDC42BPA-208ENST00000442054 Q6ZRG5 221 aa6.12□□□□□ -1.43
CDC42BPA-208ENST00000442054 OR13D1Q8NGV5 346 aa6.12□□□□□ -1.43
CDC42BPA-208ENST00000442054 RPEQ96AT9 228 aa6.12□□□□□ -1.43
CDC42BPA-208ENST00000442054 METTL1Q9UBP6 276 aaKnown RBP6.12□□□□□ -1.43
CDC42BPA-208ENST00000442054 H7C2Y5 167 aa6.12□□□□□ -1.43
CDC42BPA-208ENST00000442054 WNT9BO14905 357 aa6.12□□□□□ -1.43
CDC42BPA-208ENST00000442054 ACTL6BO94805 426 aa6.12□□□□□ -1.43
CDC42BPA-208ENST00000442054 PVALBP20472 110 aaPredicted RBP6.12□□□□□ -1.43
CDC42BPA-208ENST00000442054 ERVFRD-1P60508 538 aa6.12□□□□□ -1.43
CDC42BPA-208ENST00000442054 CCL20P78556 96 aa6.12□□□□□ -1.43
CDC42BPA-208ENST00000442054 IL13RA2Q14627 380 aa6.12□□□□□ -1.43
CDC42BPA-208ENST00000442054 ARL6IP1Q15041 203 aa6.12□□□□□ -1.43
CDC42BPA-208ENST00000442054 TAF9Q16594 264 aa6.12□□□□□ -1.43
CDC42BPA-208ENST00000442054 RNASE11Q8TAA1 199 aaKnown RBP6.12□□□□□ -1.43
CDC42BPA-208ENST00000442054 GAL3ST2Q9H3Q3 398 aa6.12□□□□□ -1.43
CDC42BPA-208ENST00000442054 IGSF23A1L1A6 192 aa6.11□□□□□ -1.43
CDC42BPA-208ENST00000442054 E5RGE8 158 aa6.11□□□□□ -1.43
CDC42BPA-208ENST00000442054 RBMXL2O75526 392 aaKnown RBP6.11□□□□□ -1.43
CDC42BPA-208ENST00000442054 CEACAM3P40198 252 aa6.11□□□□□ -1.43
CDC42BPA-208ENST00000442054 RBM11P57052 281 aaKnown RBP6.11□□□□□ -1.43
CDC42BPA-208ENST00000442054 MRPS11P82912 194 aaKnown RBP6.11□□□□□ -1.43
CDC42BPA-208ENST00000442054 NHLH2Q02577 135 aa6.11□□□□□ -1.43
CDC42BPA-208ENST00000442054 HNF4GQ14541 408 aa6.11□□□□□ -1.43
CDC42BPA-208ENST00000442054 IGSF11Q5DX21 431 aa6.11□□□□□ -1.43
CDC42BPA-208ENST00000442054 WDR25Q64LD2 544 aaPredicted RBP6.11□□□□□ -1.43
CDC42BPA-208ENST00000442054 ZNRF1Q8ND25 227 aa6.11□□□□□ -1.43
CDC42BPA-208ENST00000442054 SPACA1Q9HBV2 294 aa6.11□□□□□ -1.43
CDC42BPA-208ENST00000442054 BIN3Q9NQY0 253 aa6.11□□□□□ -1.43
CDC42BPA-208ENST00000442054 NSG2Q9Y328 171 aa6.11□□□□□ -1.43
CDC42BPA-208ENST00000442054 TRBV23-1A0A0A0MS06 115 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms