RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 CBLN1P23435 193 aa17.11■□□□□ 0.33
SHOX2-203ENST00000441443 DSCR4P56555 118 aaPredicted RBP17.11■□□□□ 0.33
SHOX2-203ENST00000441443 IGFBP7Q16270 282 aa17.11■□□□□ 0.33
SHOX2-203ENST00000441443 TMEM204Q9BSN7 226 aa17.11■□□□□ 0.33
SHOX2-203ENST00000441443 TRAV24A0A0B4J272 114 aa17.11■□□□□ 0.33
SHOX2-203ENST00000441443 SERF1AO75920 110 aa17.11■□□□□ 0.33
SHOX2-203ENST00000441443 CRYABP02511 175 aaKnown RBP17.11■□□□□ 0.33
SHOX2-203ENST00000441443 TMEM183BQ1AE95 376 aa17.11■□□□□ 0.33
SHOX2-203ENST00000441443 YRDCQ86U90 279 aaKnown RBP17.11■□□□□ 0.33
SHOX2-203ENST00000441443 PRO3102Q9H379 93 aa17.11■□□□□ 0.33
SHOX2-203ENST00000441443 PROK2Q9HC23 129 aa17.11■□□□□ 0.33
SHOX2-203ENST00000441443 TPPP2P59282 170 aa17.1■□□□□ 0.33
SHOX2-203ENST00000441443 GCSAMLQ5JQS6 135 aa17.1■□□□□ 0.33
SHOX2-203ENST00000441443 IGHV1-45A0A0A0MS14 117 aa17.1■□□□□ 0.33
SHOX2-203ENST00000441443 F2Z2F3 143 aa17.1■□□□□ 0.33
SHOX2-203ENST00000441443 CD82P27701 267 aa17.1■□□□□ 0.33
SHOX2-203ENST00000441443 UBE2NP61088 152 aaKnown RBP17.1■□□□□ 0.33
SHOX2-203ENST00000441443 SPINK9Q5DT21 86 aa17.1■□□□□ 0.33
SHOX2-203ENST00000441443 RPS19BP1Q86WX3 136 aaKnown RBP17.1■□□□□ 0.33
SHOX2-203ENST00000441443 KLF7O75840 302 aaPredicted RBP17.1■□□□□ 0.33
SHOX2-203ENST00000441443 KRASP01116 189 aa17.1■□□□□ 0.33
SHOX2-203ENST00000441443 THBS3P49746 956 aa17.1■□□□□ 0.33
SHOX2-203ENST00000441443 RAC1P63000 192 aa17.1■□□□□ 0.33
SHOX2-203ENST00000441443 NUFIP2Q7Z417 695 aaKnown RBP17.1■□□□□ 0.33
SHOX2-203ENST00000441443 SPSB4Q96A44 273 aa17.1■□□□□ 0.33
SHOX2-203ENST00000441443 C1QTNF5Q9BXJ0 243 aa17.1■□□□□ 0.33
SHOX2-203ENST00000441443 ZNF552Q9H707 407 aaPredicted RBP17.1■□□□□ 0.33
SHOX2-203ENST00000441443 SSR4P51571 173 aa17.09■□□□□ 0.33
SHOX2-203ENST00000441443 C11orf42Q8N5U0 333 aa17.09■□□□□ 0.33
SHOX2-203ENST00000441443 SFRP2Q96HF1 295 aa17.09■□□□□ 0.33
SHOX2-203ENST00000441443 TMEM147Q9BVK8 224 aa17.09■□□□□ 0.33
SHOX2-203ENST00000441443 NPCDR1Q9BY65 106 aa17.09■□□□□ 0.33
SHOX2-203ENST00000441443 STRADBQ9C0K7 418 aa17.09■□□□□ 0.33
SHOX2-203ENST00000441443 TRAV38-1A0A0B4J264 116 aa17.09■□□□□ 0.33
SHOX2-203ENST00000441443 CXCL13O43927 109 aa17.09■□□□□ 0.33
SHOX2-203ENST00000441443 COX6A1P12074 109 aa17.09■□□□□ 0.33
SHOX2-203ENST00000441443 FOXL1Q12952 345 aa17.09■□□□□ 0.33
SHOX2-203ENST00000441443 ZNF709Q8N972 641 aa17.09■□□□□ 0.33
SHOX2-203ENST00000441443 DNAJC4Q9NNZ3 241 aa17.09■□□□□ 0.33
SHOX2-203ENST00000441443 CARD18P57730 90 aa17.08■□□□□ 0.33
SHOX2-203ENST00000441443 ZDHHC16Q969W1 377 aa17.08■□□□□ 0.33
SHOX2-203ENST00000441443 PIGBOS1A0A0B4J2F0 54 aa17.08■□□□□ 0.32
SHOX2-203ENST00000441443 A0A0G2JMM0 328 aa17.08■□□□□ 0.32
SHOX2-203ENST00000441443 A0A1W2PPB8 328 aa17.08■□□□□ 0.32
SHOX2-203ENST00000441443 A0A1W2PRS3 328 aa17.08■□□□□ 0.32
SHOX2-203ENST00000441443 KIR3DP1A8MWS1 328 aa17.08■□□□□ 0.32
SHOX2-203ENST00000441443 RAMP3O60896 148 aa17.08■□□□□ 0.32
SHOX2-203ENST00000441443 G6PCP35575 357 aa17.08■□□□□ 0.32
SHOX2-203ENST00000441443 CDC34P49427 236 aaPredicted RBP17.08■□□□□ 0.32
SHOX2-203ENST00000441443 GNG10P50151 68 aa17.08■□□□□ 0.32
SHOX2-203ENST00000441443 RAB7AP51149 207 aa17.08■□□□□ 0.32
SHOX2-203ENST00000441443 PCBD1P61457 104 aa17.08■□□□□ 0.32
SHOX2-203ENST00000441443 IL11RAQ14626 422 aa17.08■□□□□ 0.32
SHOX2-203ENST00000441443 CEACAM21Q3KPI0 293 aa17.08■□□□□ 0.32
SHOX2-203ENST00000441443 FAM103A1Q9BTL3 118 aaKnown RBP17.08■□□□□ 0.32
SHOX2-203ENST00000441443 LIN7CQ9NUP9 197 aaKnown RBP17.08■□□□□ 0.32
SHOX2-203ENST00000441443 TECTAO75443 2155 aa17.08■□□□□ 0.32
SHOX2-203ENST00000441443 TRBV20OR9-2A0A075B6H5 130 aa17.07■□□□□ 0.32
SHOX2-203ENST00000441443 A0A096LPE4 126 aa17.07■□□□□ 0.32
SHOX2-203ENST00000441443 A0A1W2PPZ6 126 aa17.07■□□□□ 0.32
SHOX2-203ENST00000441443 ZNF716A6NP11 495 aa17.07■□□□□ 0.32
SHOX2-203ENST00000441443 RAC3P60763 192 aa17.07■□□□□ 0.32
SHOX2-203ENST00000441443 OR5A2Q8NGI9 324 aa17.07■□□□□ 0.32
SHOX2-203ENST00000441443 RIMS4Q9H426 269 aaPredicted RBP17.07■□□□□ 0.32
SHOX2-203ENST00000441443 DLL3Q9NYJ7 618 aa17.07■□□□□ 0.32
SHOX2-203ENST00000441443 RNF114Q9Y508 228 aa17.07■□□□□ 0.32
SHOX2-203ENST00000441443 ZG16O60844 167 aa17.07■□□□□ 0.32
SHOX2-203ENST00000441443 CRISP2P16562 243 aa17.07■□□□□ 0.32
SHOX2-203ENST00000441443 MMDQ15546 238 aa17.07■□□□□ 0.32
SHOX2-203ENST00000441443 MRPL21Q7Z2W9 205 aaKnown RBP17.07■□□□□ 0.32
SHOX2-203ENST00000441443 OR10P1Q8NGE3 313 aa17.07■□□□□ 0.32
SHOX2-203ENST00000441443 SAMD10Q9BYL1 202 aa17.07■□□□□ 0.32
SHOX2-203ENST00000441443 CNOT1A5YKK6 2376 aaKnown RBP17.07■□□□□ 0.32
SHOX2-203ENST00000441443 MDFIC2A0A1B0GVS7 189 aa17.07■□□□□ 0.32
SHOX2-203ENST00000441443 KITLGP21583 273 aa17.07■□□□□ 0.32
SHOX2-203ENST00000441443 LHX2P50458 406 aa17.07■□□□□ 0.32
SHOX2-203ENST00000441443 MSMO1Q15800 293 aa17.07■□□□□ 0.32
SHOX2-203ENST00000441443 MRPL52Q86TS9 123 aaKnown RBP17.07■□□□□ 0.32
SHOX2-203ENST00000441443 OR5AU1Q8NGC0 362 aa17.07■□□□□ 0.32
SHOX2-203ENST00000441443 SF3B5Q9BWJ5 86 aaKnown RBP17.07■□□□□ 0.32
SHOX2-203ENST00000441443 CACNA1HO95180 2353 aa17.06■□□□□ 0.32
SHOX2-203ENST00000441443 TMEM265A0A087WTH1 108 aa17.06■□□□□ 0.32
SHOX2-203ENST00000441443 C5orf49A4QMS7 147 aa17.06■□□□□ 0.32
SHOX2-203ENST00000441443 FRMD6-AS1P0C7T7 363 aa17.06■□□□□ 0.32
SHOX2-203ENST00000441443 CD99P14209 185 aa17.06■□□□□ 0.32
SHOX2-203ENST00000441443 ZNF816Q0VGE8 651 aaPredicted RBP17.06■□□□□ 0.32
SHOX2-203ENST00000441443 BAGE3Q86Y29 109 aa17.06■□□□□ 0.32
SHOX2-203ENST00000441443 BAGE2Q86Y30 109 aa17.06■□□□□ 0.32
SHOX2-203ENST00000441443 DRAM1Q8N682 238 aa17.06■□□□□ 0.32
SHOX2-203ENST00000441443 IMMP1LQ96LU5 166 aa17.06■□□□□ 0.32
SHOX2-203ENST00000441443 F6UZH7 168 aa17.06■□□□□ 0.32
SHOX2-203ENST00000441443 FOLR3P41439 243 aa17.06■□□□□ 0.32
SHOX2-203ENST00000441443 PAFAH1B2P68402 229 aa17.06■□□□□ 0.32
SHOX2-203ENST00000441443 UBALD2Q8IYN6 164 aa17.06■□□□□ 0.32
SHOX2-203ENST00000441443 PRDM14Q9GZV8 571 aa17.06■□□□□ 0.32
SHOX2-203ENST00000441443 FOXJ2Q9P0K8 574 aa17.06■□□□□ 0.32
SHOX2-203ENST00000441443 CHRNB4P30926 498 aa17.05■□□□□ 0.32
SHOX2-203ENST00000441443 FREM1Q5H8C1 2179 aa17.05■□□□□ 0.32
SHOX2-203ENST00000441443 COL5A1-AS1Q5SY13 56 aa17.05■□□□□ 0.32
SHOX2-203ENST00000441443 SAXO1Q8IYX7 474 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms