RNA–Protein interactions for RNA: ENST00000441246.6

POLR2B-205, Transcript of RNA polymerase II subunit B, humanhuman

TSL 2 BASIC

Gene POLR2B, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-205ENST00000441246 MKXQ8IYA7 352 aa12.61□□□□□ -0.39
POLR2B-205ENST00000441246 OR10D3Q8NH80 312 aa12.61□□□□□ -0.39
POLR2B-205ENST00000441246 THBS3P49746 956 aa12.6□□□□□ -0.39
POLR2B-205ENST00000441246 LHX2P50458 406 aa12.6□□□□□ -0.39
POLR2B-205ENST00000441246 ZXDAP98168 799 aa12.6□□□□□ -0.39
POLR2B-205ENST00000441246 OR51B6Q9H340 312 aa12.6□□□□□ -0.39
POLR2B-205ENST00000441246 RBM7Q9Y580 266 aaKnown RBP12.6□□□□□ -0.39
POLR2B-205ENST00000441246 PI4KAP42356 2102 aa12.6□□□□□ -0.39
POLR2B-205ENST00000441246 IGHV3-64DA0A0J9YX35 117 aa12.6□□□□□ -0.39
POLR2B-205ENST00000441246 SERF1AO75920 110 aa12.6□□□□□ -0.39
POLR2B-205ENST00000441246 RPL30P62888 115 aaKnown RBP12.6□□□□□ -0.39
POLR2B-205ENST00000441246 HOXA4Q00056 320 aaPredicted RBP12.6□□□□□ -0.39
POLR2B-205ENST00000441246 SAXO1Q8IYX7 474 aa12.6□□□□□ -0.39
POLR2B-205ENST00000441246 VN1R17PQ8TDU5 208 aa12.6□□□□□ -0.39
POLR2B-205ENST00000441246 MIEN1Q9BRT3 115 aa12.6□□□□□ -0.39
POLR2B-205ENST00000441246 LOC400499M0QZD8 3231 aa12.6□□□□□ -0.39
POLR2B-205ENST00000441246 BRWD1-AS2P59051 145 aa12.6□□□□□ -0.39
POLR2B-205ENST00000441246 ZNF816Q0VGE8 651 aaPredicted RBP12.6□□□□□ -0.39
POLR2B-205ENST00000441246 GAGE1Q13065 139 aa12.6□□□□□ -0.39
POLR2B-205ENST00000441246 TRA2AQ13595 282 aaKnown RBP eCLIP12.6□□□□□ -0.39
POLR2B-205ENST00000441246 HSPB7Q9UBY9 170 aa12.6□□□□□ -0.39
POLR2B-205ENST00000441246 TRBV6-6A0A0A6YYG2 114 aa12.59□□□□□ -0.39
POLR2B-205ENST00000441246 TNFSF13O75888 250 aa12.59□□□□□ -0.39
POLR2B-205ENST00000441246 IL6RP08887 468 aaPredicted RBP12.59□□□□□ -0.39
POLR2B-205ENST00000441246 COX6A1P12074 109 aa12.59□□□□□ -0.39
POLR2B-205ENST00000441246 CCL7P80098 99 aa12.59□□□□□ -0.39
POLR2B-205ENST00000441246 HSPB9Q9BQS6 159 aa12.59□□□□□ -0.39
POLR2B-205ENST00000441246 MSL2Q9HCI7 577 aa12.59□□□□□ -0.39
POLR2B-205ENST00000441246 PCP4P48539 62 aa12.59□□□□□ -0.39
POLR2B-205ENST00000441246 WIPI1Q5MNZ9 446 aaPredicted RBP12.59□□□□□ -0.39
POLR2B-205ENST00000441246 SFRP2Q96HF1 295 aa12.59□□□□□ -0.39
POLR2B-205ENST00000441246 IMMP1LQ96LU5 166 aa12.59□□□□□ -0.39
POLR2B-205ENST00000441246 OR2J1Q9GZK6 312 aa12.59□□□□□ -0.39
POLR2B-205ENST00000441246 C19orf25Q9UFG5 118 aaPredicted RBP12.59□□□□□ -0.39
POLR2B-205ENST00000441246 ODAMA1E959 279 aa12.59□□□□□ -0.39
POLR2B-205ENST00000441246 PCBD1P61457 104 aa12.59□□□□□ -0.39
POLR2B-205ENST00000441246 MRPL21Q7Z2W9 205 aaKnown RBP12.59□□□□□ -0.39
POLR2B-205ENST00000441246 C20orf144Q9BQM9 153 aa12.59□□□□□ -0.39
POLR2B-205ENST00000441246 FSCN3Q9NQT6 498 aa12.59□□□□□ -0.39
POLR2B-205ENST00000441246 CBR3O75828 277 aa12.58□□□□□ -0.4
POLR2B-205ENST00000441246 CD82P27701 267 aa12.58□□□□□ -0.4
POLR2B-205ENST00000441246 HLA-DRB5Q30154 266 aa12.58□□□□□ -0.4
POLR2B-205ENST00000441246 TMEM147Q9BVK8 224 aa12.58□□□□□ -0.4
POLR2B-205ENST00000441246 OPN3Q9H1Y3 402 aaPredicted RBP12.58□□□□□ -0.4
POLR2B-205ENST00000441246 SIRPB1O00241 398 aa12.58□□□□□ -0.4
POLR2B-205ENST00000441246 TRAPPC6AO75865 159 aa12.58□□□□□ -0.4
POLR2B-205ENST00000441246 FOXL1Q12952 345 aa12.58□□□□□ -0.4
POLR2B-205ENST00000441246 Q6P435 159 aa12.58□□□□□ -0.4
POLR2B-205ENST00000441246 SMRP1Q8NCR6 262 aa12.58□□□□□ -0.4
POLR2B-205ENST00000441246 CCDC74BQ96LY2 380 aa12.58□□□□□ -0.4
POLR2B-205ENST00000441246 PATZ1Q9HBE1 687 aaKnown RBP12.58□□□□□ -0.4
POLR2B-205ENST00000441246 LIN7CQ9NUP9 197 aaKnown RBP12.58□□□□□ -0.4
POLR2B-205ENST00000441246 TMPRSS2O15393 492 aa12.58□□□□□ -0.4
POLR2B-205ENST00000441246 COX5AP20674 150 aa12.58□□□□□ -0.4
POLR2B-205ENST00000441246 SSR4P51571 173 aa12.58□□□□□ -0.4
POLR2B-205ENST00000441246 UBE2NP61088 152 aaKnown RBP12.58□□□□□ -0.4
POLR2B-205ENST00000441246 OR5I1Q13606 314 aa12.58□□□□□ -0.4
POLR2B-205ENST00000441246 TRIP6Q15654 476 aaKnown RBP12.58□□□□□ -0.4
POLR2B-205ENST00000441246 FAM58AQ8N1B3 248 aa12.58□□□□□ -0.4
POLR2B-205ENST00000441246 DOCK10Q96BY6 2186 aa12.57□□□□□ -0.4
POLR2B-205ENST00000441246 DCHS1Q96JQ0 3298 aa12.57□□□□□ -0.4
POLR2B-205ENST00000441246 SLC17A3O00476 420 aa12.57□□□□□ -0.4
POLR2B-205ENST00000441246 DEGS1O15121 323 aa12.57□□□□□ -0.4
POLR2B-205ENST00000441246 P0C879 139 aa12.57□□□□□ -0.4
POLR2B-205ENST00000441246 ARF1P84077 181 aaKnown RBP12.57□□□□□ -0.4
POLR2B-205ENST00000441246 ZDHHC11Q9H8X9 412 aa12.57□□□□□ -0.4
POLR2B-205ENST00000441246 LY6G6EA0A0G2JKS1 128 aa12.57□□□□□ -0.4
POLR2B-205ENST00000441246 M0QZK8 103 aa12.57□□□□□ -0.4
POLR2B-205ENST00000441246 S1PR2O95136 353 aa12.57□□□□□ -0.4
POLR2B-205ENST00000441246 CDC34P49427 236 aaPredicted RBP12.57□□□□□ -0.4
POLR2B-205ENST00000441246 PSG7Q13046 419 aa12.57□□□□□ -0.4
POLR2B-205ENST00000441246 RIPPLY2Q5TAB7 128 aa12.57□□□□□ -0.4
POLR2B-205ENST00000441246 NUFIP2Q7Z417 695 aaKnown RBP12.57□□□□□ -0.4
POLR2B-205ENST00000441246 U3KQA8 63 aa12.57□□□□□ -0.4
POLR2B-205ENST00000441246 ZNF808Q8N4W9 903 aaPredicted RBP12.57□□□□□ -0.4
POLR2B-205ENST00000441246 RIMS4Q9H426 269 aaPredicted RBP12.57□□□□□ -0.4
POLR2B-205ENST00000441246 DNAJC13O75165 2243 aa12.56□□□□□ -0.4
POLR2B-205ENST00000441246 SCO2A0A1W2PP80 73 aa12.56□□□□□ -0.4
POLR2B-205ENST00000441246 NPIPB11E5RHQ5 1161 aa12.56□□□□□ -0.4
POLR2B-205ENST00000441246 YPEL3P61236 119 aaPredicted RBP12.56□□□□□ -0.4
POLR2B-205ENST00000441246 LOC102723996A0A087X1L8 192 aa12.56□□□□□ -0.4
POLR2B-205ENST00000441246 LRRC30A6NM36 301 aa12.56□□□□□ -0.4
POLR2B-205ENST00000441246 Q8N976 141 aa12.56□□□□□ -0.4
POLR2B-205ENST00000441246 OCC1Q8TAD7 63 aa12.56□□□□□ -0.4
POLR2B-205ENST00000441246 K7EN84 100 aa12.56□□□□□ -0.4
POLR2B-205ENST00000441246 RRHO14718 337 aa12.56□□□□□ -0.4
POLR2B-205ENST00000441246 KLF7O75840 302 aaPredicted RBP12.56□□□□□ -0.4
POLR2B-205ENST00000441246 SELENOTP62341 195 aa12.56□□□□□ -0.4
POLR2B-205ENST00000441246 CADM4Q8NFZ8 388 aa12.56□□□□□ -0.4
POLR2B-205ENST00000441246 OR10P1Q8NGE3 313 aa12.56□□□□□ -0.4
POLR2B-205ENST00000441246 FBXL7Q9UJT9 491 aa12.56□□□□□ -0.4
POLR2B-205ENST00000441246 TRAPPC2LQ9UL33 140 aa12.56□□□□□ -0.4
POLR2B-205ENST00000441246 SMG1Q96Q15 3661 aaKnown RBP12.56□□□□□ -0.4
POLR2B-205ENST00000441246 CD99P14209 185 aa12.55□□□□□ -0.4
POLR2B-205ENST00000441246 EDDM3BP56851 147 aa12.55□□□□□ -0.4
POLR2B-205ENST00000441246 KRTCAP3Q53RY4 240 aa12.55□□□□□ -0.4
POLR2B-205ENST00000441246 DTD1Q8TEA8 209 aa12.55□□□□□ -0.4
POLR2B-205ENST00000441246 RYDENQ9NUL5 291 aaKnown RBP12.55□□□□□ -0.4
POLR2B-205ENST00000441246 PINLYPA6NC86 204 aa12.55□□□□□ -0.4
POLR2B-205ENST00000441246 C17orf98A8MV24 154 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms