RNA–Protein interactions for RNA: ENST00000441123.1

BRPF3-203, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 1 (best)

Gene BRPF3, Length 5,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-203ENST00000441123 C1orf162Q8NEQ5 155 aaPredicted RBP11.03□□□□□ -0.64
BRPF3-203ENST00000441123 MS4A3Q96HJ5 214 aa11.03□□□□□ -0.64
BRPF3-203ENST00000441123 IMMP1LQ96LU5 166 aa11.03□□□□□ -0.64
BRPF3-203ENST00000441123 SH3BGRL3Q9H299 93 aa11.03□□□□□ -0.64
BRPF3-203ENST00000441123 TRBV9A0A0B4J1U6 114 aa11.02□□□□□ -0.64
BRPF3-203ENST00000441123 TMEM250H0YL14 139 aa11.02□□□□□ -0.64
BRPF3-203ENST00000441123 ADAM11O75078 769 aa11.02□□□□□ -0.64
BRPF3-203ENST00000441123 UCNP55089 124 aa11.02□□□□□ -0.64
BRPF3-203ENST00000441123 LINC00518Q8N0U6 118 aa11.02□□□□□ -0.64
BRPF3-203ENST00000441123 SPAARA0A1B0GVQ0 90 aa11.02□□□□□ -0.65
BRPF3-203ENST00000441123 VENTXO95231 258 aa11.02□□□□□ -0.65
BRPF3-203ENST00000441123 NPBWR2P48146 333 aa11.02□□□□□ -0.65
BRPF3-203ENST00000441123 ZNF146Q15072 292 aa11.02□□□□□ -0.65
BRPF3-203ENST00000441123 ABLIM2Q6H8Q1 611 aa11.02□□□□□ -0.65
BRPF3-203ENST00000441123 GBF1Q92538 1859 aa11.02□□□□□ -0.65
BRPF3-203ENST00000441123 MARCH11A6NNE9 402 aa11.02□□□□□ -0.65
BRPF3-203ENST00000441123 CEACAM18A8MTB9 384 aa11.02□□□□□ -0.65
BRPF3-203ENST00000441123 Q6ZN92 141 aa11.02□□□□□ -0.65
BRPF3-203ENST00000441123 OR1P1Q8NH06 330 aa11.02□□□□□ -0.65
BRPF3-203ENST00000441123 HIST1H2BAQ96A08 127 aa11.02□□□□□ -0.65
BRPF3-203ENST00000441123 MRPL32Q9BYC8 188 aaKnown RBP11.02□□□□□ -0.65
BRPF3-203ENST00000441123 TMEM140Q9NV12 185 aa11.02□□□□□ -0.65
BRPF3-203ENST00000441123 IL36RNQ9UBH0 155 aa11.02□□□□□ -0.65
BRPF3-203ENST00000441123 THSD7BQ9C0I4 1608 aa11.02□□□□□ -0.65
BRPF3-203ENST00000441123 ZMAT5Q9UDW3 170 aaKnown RBP11.02□□□□□ -0.65
BRPF3-203ENST00000441123 TCL1AP56279 114 aa11.01□□□□□ -0.65
BRPF3-203ENST00000441123 FAM89BQ8N5H3 189 aa11.01□□□□□ -0.65
BRPF3-203ENST00000441123 OR51M1Q9H341 326 aa11.01□□□□□ -0.65
BRPF3-203ENST00000441123 COA4Q9NYJ1 87 aa11.01□□□□□ -0.65
BRPF3-203ENST00000441123 METTL1Q9UBP6 276 aaKnown RBP11.01□□□□□ -0.65
BRPF3-203ENST00000441123 ORM1P02763 201 aa11.01□□□□□ -0.65
BRPF3-203ENST00000441123 CDX1P47902 265 aaPredicted RBP11.01□□□□□ -0.65
BRPF3-203ENST00000441123 RPL8P62917 257 aaKnown RBP11.01□□□□□ -0.65
BRPF3-203ENST00000441123 CDCP2Q5VXM1 449 aa11.01□□□□□ -0.65
BRPF3-203ENST00000441123 Q6ZT83 130 aa11.01□□□□□ -0.65
BRPF3-203ENST00000441123 MMD2Q8IY49 270 aa11.01□□□□□ -0.65
BRPF3-203ENST00000441123 C5orf17Q8NAS9 161 aa11.01□□□□□ -0.65
BRPF3-203ENST00000441123 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.01□□□□□ -0.65
BRPF3-203ENST00000441123 RARRES2Q99969 163 aa11.01□□□□□ -0.65
BRPF3-203ENST00000441123 VPS25Q9BRG1 176 aa11.01□□□□□ -0.65
BRPF3-203ENST00000441123 ZNF430Q9H8G1 570 aaPredicted RBP11.01□□□□□ -0.65
BRPF3-203ENST00000441123 TMEM56-RWDD3S4R434 201 aa11.01□□□□□ -0.65
BRPF3-203ENST00000441123 F8VVB4 439 aa11.01□□□□□ -0.65
BRPF3-203ENST00000441123 F8VWA3 439 aa11.01□□□□□ -0.65
BRPF3-203ENST00000441123 KBTBD11O94819 623 aa11.01□□□□□ -0.65
BRPF3-203ENST00000441123 NDUFB4O95168 129 aa11.01□□□□□ -0.65
BRPF3-203ENST00000441123 HLA-DQA1P01909 254 aa11.01□□□□□ -0.65
BRPF3-203ENST00000441123 RPL27AP46776 148 aaKnown RBP11.01□□□□□ -0.65
BRPF3-203ENST00000441123 HIST3H3Q16695 136 aa11.01□□□□□ -0.65
BRPF3-203ENST00000441123 RNF151Q2KHN1 245 aa11.01□□□□□ -0.65
BRPF3-203ENST00000441123 MRPL54Q6P161 138 aaKnown RBP11.01□□□□□ -0.65
BRPF3-203ENST00000441123 C1QL2Q7Z5L3 287 aa11.01□□□□□ -0.65
BRPF3-203ENST00000441123 DRAM1Q8N682 238 aa11.01□□□□□ -0.65
BRPF3-203ENST00000441123 ITLN1Q8WWA0 313 aa11.01□□□□□ -0.65
BRPF3-203ENST00000441123 TREM2Q9NZC2 230 aa11.01□□□□□ -0.65
BRPF3-203ENST00000441123 C17orf51A8MQB3 221 aa11.01□□□□□ -0.65
BRPF3-203ENST00000441123 TRGC2P03986 189 aa11.01□□□□□ -0.65
BRPF3-203ENST00000441123 KLK2P20151 261 aa11.01□□□□□ -0.65
BRPF3-203ENST00000441123 C2orf68Q2NKX9 166 aa11.01□□□□□ -0.65
BRPF3-203ENST00000441123 ARTNQ5T4W7 220 aa11.01□□□□□ -0.65
BRPF3-203ENST00000441123 GBGT1Q8N5D6 347 aa11.01□□□□□ -0.65
BRPF3-203ENST00000441123 GTF3AQ92664 365 aaKnown RBP11.01□□□□□ -0.65
BRPF3-203ENST00000441123 GFI1Q99684 422 aa11.01□□□□□ -0.65
BRPF3-203ENST00000441123 CKAP5Q14008 2032 aa11□□□□□ -0.65
BRPF3-203ENST00000441123 FTH1P19P0C7X4 201 aa11□□□□□ -0.65
BRPF3-203ENST00000441123 FAM90A1Q86YD7 464 aa11□□□□□ -0.65
BRPF3-203ENST00000441123 CCL13Q99616 98 aa11□□□□□ -0.65
BRPF3-203ENST00000441123 TNFRSF19Q9NS68 423 aa11□□□□□ -0.65
BRPF3-203ENST00000441123 A0A087WWC5 75 aa11□□□□□ -0.65
BRPF3-203ENST00000441123 RAMP1O60894 148 aa11□□□□□ -0.65
BRPF3-203ENST00000441123 RPLP1P05386 114 aaKnown RBP11□□□□□ -0.65
BRPF3-203ENST00000441123 SP9P0CG40 484 aa11□□□□□ -0.65
BRPF3-203ENST00000441123 C18orf12Q96KH6 178 aa11□□□□□ -0.65
BRPF3-203ENST00000441123 TSC2P49815 1807 aa11□□□□□ -0.65
BRPF3-203ENST00000441123 H0YL77 283 aa11□□□□□ -0.65
BRPF3-203ENST00000441123 ZNF735P0CB33 412 aa11□□□□□ -0.65
BRPF3-203ENST00000441123 SRSF7Q16629 238 aaKnown RBP eCLIP11□□□□□ -0.65
BRPF3-203ENST00000441123 RHOVQ96L33 236 aa11□□□□□ -0.65
BRPF3-203ENST00000441123 REPIN1Q9BWE0 567 aaKnown RBP11□□□□□ -0.65
BRPF3-203ENST00000441123 SCNM1Q9BWG6 230 aa11□□□□□ -0.65
BRPF3-203ENST00000441123 A8MWL6 223 aa11□□□□□ -0.65
BRPF3-203ENST00000441123 S1PR2O95136 353 aa11□□□□□ -0.65
BRPF3-203ENST00000441123 FAM87AP0C7U9 286 aa11□□□□□ -0.65
BRPF3-203ENST00000441123 G0S2P27469 103 aa11□□□□□ -0.65
BRPF3-203ENST00000441123 OR5R1Q8NH85 324 aa11□□□□□ -0.65
BRPF3-203ENST00000441123 WDR81Q562E7 1941 aa11□□□□□ -0.65
BRPF3-203ENST00000441123 F2RL2O00254 374 aa10.99□□□□□ -0.65
BRPF3-203ENST00000441123 SFTPCP11686 197 aa10.99□□□□□ -0.65
BRPF3-203ENST00000441123 LYRM7Q5U5X0 104 aa10.99□□□□□ -0.65
BRPF3-203ENST00000441123 FAM216AQ8WUB2 273 aa10.99□□□□□ -0.65
BRPF3-203ENST00000441123 SPSB4Q96A44 273 aa10.99□□□□□ -0.65
BRPF3-203ENST00000441123 STARD4Q96DR4 205 aa10.99□□□□□ -0.65
BRPF3-203ENST00000441123 LRRC75BQ2VPJ9 315 aa10.99□□□□□ -0.65
BRPF3-203ENST00000441123 FAM131CQ96AQ9 280 aa10.99□□□□□ -0.65
BRPF3-203ENST00000441123 TIMP4Q99727 224 aa10.99□□□□□ -0.65
BRPF3-203ENST00000441123 ZG16O60844 167 aa10.99□□□□□ -0.65
BRPF3-203ENST00000441123 LTBRP36941 435 aa10.99□□□□□ -0.65
BRPF3-203ENST00000441123 IBA57Q5T440 356 aaKnown RBP10.99□□□□□ -0.65
BRPF3-203ENST00000441123 STPG1Q5TH74 334 aa10.99□□□□□ -0.65
BRPF3-203ENST00000441123 SNRNP40Q96DI7 357 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms