RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 ZNF695Q8IW36 515 aa18.83■□□□□ 0.6
CPNE1-217ENST00000439669 ABHD5Q8WTS1 349 aa18.83■□□□□ 0.6
CPNE1-217ENST00000439669 FLYWCH2Q96CP2 140 aaKnown RBP18.83■□□□□ 0.6
CPNE1-217ENST00000439669 ANXA10Q9UJ72 324 aa18.83■□□□□ 0.6
CPNE1-217ENST00000439669 NOTCH1P46531 2555 aa18.83■□□□□ 0.6
CPNE1-217ENST00000439669 TRAV41A0A0B4J266 112 aa18.82■□□□□ 0.6
CPNE1-217ENST00000439669 SPDEFO95238 335 aa18.82■□□□□ 0.6
CPNE1-217ENST00000439669 SMIM18P0DKX4 95 aa18.82■□□□□ 0.6
CPNE1-217ENST00000439669 SLC6A1P30531 599 aa18.82■□□□□ 0.6
CPNE1-217ENST00000439669 THBS3P49746 956 aa18.82■□□□□ 0.6
CPNE1-217ENST00000439669 NDPQ00604 133 aa18.82■□□□□ 0.6
CPNE1-217ENST00000439669 CBX3Q13185 183 aa18.82■□□□□ 0.6
CPNE1-217ENST00000439669 WFDC9Q8NEX5 89 aa18.82■□□□□ 0.6
CPNE1-217ENST00000439669 OR13F1Q8NGS4 319 aa18.82■□□□□ 0.6
CPNE1-217ENST00000439669 CLCC1Q96S66 551 aa18.82■□□□□ 0.6
CPNE1-217ENST00000439669 AUNIPQ9H7T9 357 aa18.82■□□□□ 0.6
CPNE1-217ENST00000439669 IGLL1P15814 213 aa18.81■□□□□ 0.6
CPNE1-217ENST00000439669 LUMP51884 338 aaPredicted RBP18.81■□□□□ 0.6
CPNE1-217ENST00000439669 ARPC4P59998 168 aa18.81■□□□□ 0.6
CPNE1-217ENST00000439669 VBP1P61758 197 aa18.81■□□□□ 0.6
CPNE1-217ENST00000439669 CX3CL1P78423 397 aa18.81■□□□□ 0.6
CPNE1-217ENST00000439669 ECSCRQ19T08 205 aa18.81■□□□□ 0.6
CPNE1-217ENST00000439669 UBE2NLQ5JXB2 153 aa18.81■□□□□ 0.6
CPNE1-217ENST00000439669 ZNF660Q6AZW8 331 aaPredicted RBP18.81■□□□□ 0.6
CPNE1-217ENST00000439669 ETV3LQ6ZN32 361 aa18.81■□□□□ 0.6
CPNE1-217ENST00000439669 SAMD12Q8N8I0 201 aa18.81■□□□□ 0.6
CPNE1-217ENST00000439669 RNF152Q8N8N0 203 aa18.81■□□□□ 0.6
CPNE1-217ENST00000439669 BEST4Q8NFU0 473 aa18.81■□□□□ 0.6
CPNE1-217ENST00000439669 S100A16Q96FQ6 103 aaKnown RBP18.81■□□□□ 0.6
CPNE1-217ENST00000439669 OR2W1Q9Y3N9 320 aa18.81■□□□□ 0.6
CPNE1-217ENST00000439669 FCN1O00602 326 aa18.8■□□□□ 0.6
CPNE1-217ENST00000439669 SLC25A17O43808 307 aa18.8■□□□□ 0.6
CPNE1-217ENST00000439669 PTHLHP12272 177 aa18.8■□□□□ 0.6
CPNE1-217ENST00000439669 RTL8BQ17RB0 113 aa18.8■□□□□ 0.6
CPNE1-217ENST00000439669 GVQW1Q8N7I0 195 aa18.8■□□□□ 0.6
CPNE1-217ENST00000439669 LINC00482Q8N8I6 264 aa18.8■□□□□ 0.6
CPNE1-217ENST00000439669 BVESQ8NE79 360 aa18.8■□□□□ 0.6
CPNE1-217ENST00000439669 SLC25A46Q96AG3 418 aa18.8■□□□□ 0.6
CPNE1-217ENST00000439669 ADTRPQ96IZ2 230 aa18.8■□□□□ 0.6
CPNE1-217ENST00000439669 HARBI1Q96MB7 349 aa18.8■□□□□ 0.6
CPNE1-217ENST00000439669 A3GALT2U3KPV4 340 aa18.8■□□□□ 0.6
CPNE1-217ENST00000439669 NOTCH3Q9UM47 2321 aa18.8■□□□□ 0.6
CPNE1-217ENST00000439669 CA2P00918 260 aa18.79■□□□□ 0.6
CPNE1-217ENST00000439669 FCER2P06734 321 aa18.79■□□□□ 0.6
CPNE1-217ENST00000439669 PSMB8P28062 276 aa18.79■□□□□ 0.6
CPNE1-217ENST00000439669 MYCNOSP40205 109 aa18.79■□□□□ 0.6
CPNE1-217ENST00000439669 TAGLNQ01995 201 aaKnown RBP18.79■□□□□ 0.6
CPNE1-217ENST00000439669 KPRPQ5T749 579 aaPredicted RBP18.79■□□□□ 0.6
CPNE1-217ENST00000439669 TMEM65Q6PI78 240 aa18.79■□□□□ 0.6
CPNE1-217ENST00000439669 MRPL41Q8IXM3 137 aaKnown RBP18.79■□□□□ 0.6
CPNE1-217ENST00000439669 DUX3Q96PT4 197 aa18.79■□□□□ 0.6
CPNE1-217ENST00000439669 TPSG1Q9NRR2 321 aa18.79■□□□□ 0.6
CPNE1-217ENST00000439669 FBXO7Q9Y3I1 522 aa18.79■□□□□ 0.6
CPNE1-217ENST00000439669 XRCC3O43542 346 aa18.78■□□□□ 0.6
CPNE1-217ENST00000439669 RRASP10301 218 aa18.78■□□□□ 0.6
CPNE1-217ENST00000439669 PPIFP30405 207 aaKnown RBP18.78■□□□□ 0.6
CPNE1-217ENST00000439669 DUTP33316 252 aaKnown RBP18.78■□□□□ 0.6
CPNE1-217ENST00000439669 HOGA1Q86XE5 327 aa18.78■□□□□ 0.6
CPNE1-217ENST00000439669 ZNF645Q8N7E2 425 aa18.78■□□□□ 0.6
CPNE1-217ENST00000439669 KCTD12Q96CX2 325 aaKnown RBP18.78■□□□□ 0.6
CPNE1-217ENST00000439669 RCC1LQ96I51 464 aaKnown RBP18.78■□□□□ 0.6
CPNE1-217ENST00000439669 A0A1W2PN81 502 aa18.77■□□□□ 0.6
CPNE1-217ENST00000439669 SHOXO15266 292 aa18.77■□□□□ 0.6
CPNE1-217ENST00000439669 HLA-DQB1P01920 261 aa18.77■□□□□ 0.6
CPNE1-217ENST00000439669 CHRNA7P36544 502 aa18.77■□□□□ 0.6
CPNE1-217ENST00000439669 CDX1P47902 265 aaPredicted RBP18.77■□□□□ 0.6
CPNE1-217ENST00000439669 LGALS7P47929 136 aa18.77■□□□□ 0.6
CPNE1-217ENST00000439669 DEFB136Q30KP8 78 aa18.77■□□□□ 0.6
CPNE1-217ENST00000439669 TMEM69Q5SWH9 247 aa18.77■□□□□ 0.6
CPNE1-217ENST00000439669 FAM103A1Q9BTL3 118 aaKnown RBP18.77■□□□□ 0.6
CPNE1-217ENST00000439669 IGKV1D-13A0A0B4J2D9 117 aa18.76■□□□□ 0.59
CPNE1-217ENST00000439669 MEIS3P1A6NDR6 274 aa18.76■□□□□ 0.59
CPNE1-217ENST00000439669 CCL24O00175 119 aa18.76■□□□□ 0.59
CPNE1-217ENST00000439669 PRB2P02812 416 aaPredicted RBP18.76■□□□□ 0.59
CPNE1-217ENST00000439669 IGKV1-13P0DP09 117 aa18.76■□□□□ 0.59
CPNE1-217ENST00000439669 CBX5P45973 191 aa18.76■□□□□ 0.59
CPNE1-217ENST00000439669 CRIP2P52943 208 aaPredicted RBP18.76■□□□□ 0.59
CPNE1-217ENST00000439669 RAB25P57735 213 aa18.76■□□□□ 0.59
CPNE1-217ENST00000439669 ZNF562Q6V9R5 426 aa18.76■□□□□ 0.59
CPNE1-217ENST00000439669 PPP1R27Q86WC6 154 aa18.76■□□□□ 0.59
CPNE1-217ENST00000439669 RAX2Q96IS3 184 aa18.76■□□□□ 0.59
CPNE1-217ENST00000439669 MRPS26Q9BYN8 205 aaKnown RBP18.76■□□□□ 0.59
CPNE1-217ENST00000439669 KLK15Q9H2R5 256 aa18.76■□□□□ 0.59
CPNE1-217ENST00000439669 IFT46Q9NQC8 304 aa18.76■□□□□ 0.59
CPNE1-217ENST00000439669 FOXA2Q9Y261 457 aaPredicted RBP18.76■□□□□ 0.59
CPNE1-217ENST00000439669 LINC00473A8K010 186 aa18.75■□□□□ 0.59
CPNE1-217ENST00000439669 TUSC2O75896 110 aa18.75■□□□□ 0.59
CPNE1-217ENST00000439669 SLC22A5O76082 557 aa18.75■□□□□ 0.59
CPNE1-217ENST00000439669 CRYZL1O95825 349 aa18.75■□□□□ 0.59
CPNE1-217ENST00000439669 IGLV1-40P01703 118 aa18.75■□□□□ 0.59
CPNE1-217ENST00000439669 IGLV2-23P01705 113 aa18.75■□□□□ 0.59
CPNE1-217ENST00000439669 TAS2R20P59543 309 aa18.75■□□□□ 0.59
CPNE1-217ENST00000439669 GNB1P62873 340 aa18.75■□□□□ 0.59
CPNE1-217ENST00000439669 TMEM267Q0VDI3 215 aaPredicted RBP18.75■□□□□ 0.59
CPNE1-217ENST00000439669 TMEM177Q53S58 311 aa18.75■□□□□ 0.59
CPNE1-217ENST00000439669 UNQ5815/PRO19632Q6UWF5 114 aa18.75■□□□□ 0.59
CPNE1-217ENST00000439669 KCTD9Q7L273 389 aa18.75■□□□□ 0.59
CPNE1-217ENST00000439669 TCTEX1D1Q8N7M0 179 aa18.75■□□□□ 0.59
CPNE1-217ENST00000439669 MINDY2Q8NBR6 621 aa18.75■□□□□ 0.59
CPNE1-217ENST00000439669 GRPEL2Q8TAA5 225 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms