RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 CLDN34H7C241 214 aa10.45□□□□□ -0.74
TCOF1-205ENST00000439160 CHEK1O14757 476 aa10.45□□□□□ -0.74
TCOF1-205ENST00000439160 SNRPCP09234 159 aaKnown RBP10.45□□□□□ -0.74
TCOF1-205ENST00000439160 PSG5Q15238 335 aa10.45□□□□□ -0.74
TCOF1-205ENST00000439160 NABP1Q96AH0 204 aa10.45□□□□□ -0.74
TCOF1-205ENST00000439160 DCTN5Q9BTE1 182 aa10.45□□□□□ -0.74
TCOF1-205ENST00000439160 C5orf63A6NC05 138 aa10.45□□□□□ -0.74
TCOF1-205ENST00000439160 ZNF98A6NK75 572 aa10.45□□□□□ -0.74
TCOF1-205ENST00000439160 C12orf77C9JDV5 145 aa10.45□□□□□ -0.74
TCOF1-205ENST00000439160 NTF3P20783 257 aa10.45□□□□□ -0.74
TCOF1-205ENST00000439160 BTCP35070 178 aa10.45□□□□□ -0.74
TCOF1-205ENST00000439160 VKORC1L1Q8N0U8 176 aa10.45□□□□□ -0.74
TCOF1-205ENST00000439160 COA4Q9NYJ1 87 aa10.45□□□□□ -0.74
TCOF1-205ENST00000439160 DOCK10Q96BY6 2186 aa10.45□□□□□ -0.74
TCOF1-205ENST00000439160 PHOX2AO14813 284 aa10.45□□□□□ -0.74
TCOF1-205ENST00000439160 S1PR2O95136 353 aa10.45□□□□□ -0.74
TCOF1-205ENST00000439160 SPP1P10451 314 aa10.45□□□□□ -0.74
TCOF1-205ENST00000439160 TMEM187Q14656 261 aa10.45□□□□□ -0.74
TCOF1-205ENST00000439160 ACP7Q6ZNF0 438 aa10.45□□□□□ -0.74
TCOF1-205ENST00000439160 SPACA3Q8IXA5 215 aa10.45□□□□□ -0.74
TCOF1-205ENST00000439160 PUSL1Q8N0Z8 303 aaKnown RBP10.45□□□□□ -0.74
TCOF1-205ENST00000439160 OR4F17Q8NGA8 305 aa10.45□□□□□ -0.74
TCOF1-205ENST00000439160 LURAP1Q96LR2 239 aa10.45□□□□□ -0.74
TCOF1-205ENST00000439160 ZDHHC11Q9H8X9 412 aa10.45□□□□□ -0.74
TCOF1-205ENST00000439160 MARCH11A6NNE9 402 aa10.44□□□□□ -0.74
TCOF1-205ENST00000439160 GNG7O60262 68 aa10.44□□□□□ -0.74
TCOF1-205ENST00000439160 HKR1P10072 659 aa10.44□□□□□ -0.74
TCOF1-205ENST00000439160 ARF6P62330 175 aa10.44□□□□□ -0.74
TCOF1-205ENST00000439160 BSPH1Q075Z2 132 aa10.44□□□□□ -0.74
TCOF1-205ENST00000439160 FHL1Q13642 323 aa10.44□□□□□ -0.74
TCOF1-205ENST00000439160 AWAT1Q58HT5 328 aa10.44□□□□□ -0.74
TCOF1-205ENST00000439160 NHLRC3Q5JS37 347 aa10.44□□□□□ -0.74
TCOF1-205ENST00000439160 SLC24A4Q8NFF2 622 aa10.44□□□□□ -0.74
TCOF1-205ENST00000439160 AAMDCQ9H7C9 122 aa10.44□□□□□ -0.74
TCOF1-205ENST00000439160 SIRT7Q9NRC8 400 aa10.44□□□□□ -0.74
TCOF1-205ENST00000439160 C1RLQ9NZP8 487 aa10.44□□□□□ -0.74
TCOF1-205ENST00000439160 C11orf94C9JXX5 98 aa10.44□□□□□ -0.74
TCOF1-205ENST00000439160 EIF3GO75821 320 aaKnown RBP eCLIP10.44□□□□□ -0.74
TCOF1-205ENST00000439160 FBP1P09467 338 aa10.44□□□□□ -0.74
TCOF1-205ENST00000439160 CCL1P22362 96 aa10.44□□□□□ -0.74
TCOF1-205ENST00000439160 CRYGSP22914 178 aa10.44□□□□□ -0.74
TCOF1-205ENST00000439160 OR5I1Q13606 314 aa10.44□□□□□ -0.74
TCOF1-205ENST00000439160 GAMTQ14353 236 aa10.44□□□□□ -0.74
TCOF1-205ENST00000439160 TEPPQ6URK8 271 aa10.44□□□□□ -0.74
TCOF1-205ENST00000439160 ZCCHC24Q8N2G6 241 aaKnown RBP10.44□□□□□ -0.74
TCOF1-205ENST00000439160 ZNF596Q8TC21 504 aa10.44□□□□□ -0.74
TCOF1-205ENST00000439160 PARP11Q9NR21 331 aa10.44□□□□□ -0.74
TCOF1-205ENST00000439160 TECTAO75443 2155 aa10.44□□□□□ -0.74
TCOF1-205ENST00000439160 IGKV3D-15A0A087WSY6 115 aa10.44□□□□□ -0.74
TCOF1-205ENST00000439160 IGHV1-69-2A0A0G2JMI3 117 aa10.44□□□□□ -0.74
TCOF1-205ENST00000439160 PAGE4O60829 102 aa10.44□□□□□ -0.74
TCOF1-205ENST00000439160 SS18L1O75177 396 aaPredicted RBP10.44□□□□□ -0.74
TCOF1-205ENST00000439160 CD1BP29016 333 aa10.44□□□□□ -0.74
TCOF1-205ENST00000439160 NCMAPQ5T1S8 102 aa10.44□□□□□ -0.74
TCOF1-205ENST00000439160 TMEM37Q8WXS4 190 aa10.44□□□□□ -0.74
TCOF1-205ENST00000439160 TOLLIPQ9H0E2 274 aa10.44□□□□□ -0.74
TCOF1-205ENST00000439160 GAR1Q9NY12 217 aaKnown RBP10.44□□□□□ -0.74
TCOF1-205ENST00000439160 ELOVL5Q9NYP7 299 aa10.44□□□□□ -0.74
TCOF1-205ENST00000439160 PQLC2LA1A4F0 135 aa10.43□□□□□ -0.74
TCOF1-205ENST00000439160 MFSD2BA6NFX1 497 aa10.43□□□□□ -0.74
TCOF1-205ENST00000439160 PITX3O75364 302 aa10.43□□□□□ -0.74
TCOF1-205ENST00000439160 CTRB1P17538 263 aa10.43□□□□□ -0.74
TCOF1-205ENST00000439160 CTRB2Q6GPI1 263 aa10.43□□□□□ -0.74
TCOF1-205ENST00000439160 FAM216BQ8N7L0 139 aa10.43□□□□□ -0.74
TCOF1-205ENST00000439160 OR10D4PQ8NGN7 298 aa10.43□□□□□ -0.74
TCOF1-205ENST00000439160 GNG4P50150 75 aa10.43□□□□□ -0.74
TCOF1-205ENST00000439160 UCP3P55916 312 aa10.43□□□□□ -0.74
TCOF1-205ENST00000439160 RASL11BQ9BPW5 248 aa10.43□□□□□ -0.74
TCOF1-205ENST00000439160 IDI2-AS1Q9NZ38 188 aa10.43□□□□□ -0.74
TCOF1-205ENST00000439160 SERTM2A0A1B0GWG4 89 aa10.43□□□□□ -0.74
TCOF1-205ENST00000439160 MPTX1A8MV57 137 aa10.43□□□□□ -0.74
TCOF1-205ENST00000439160 GAPDHP04406 335 aaKnown RBP10.43□□□□□ -0.74
TCOF1-205ENST00000439160 NUBP1P53384 320 aa10.43□□□□□ -0.74
TCOF1-205ENST00000439160 SCGB2A2Q13296 93 aa10.43□□□□□ -0.74
TCOF1-205ENST00000439160 SLC35E3Q7Z769 313 aa10.43□□□□□ -0.74
TCOF1-205ENST00000439160 MYPOPQ86VE0 399 aaPredicted RBP10.43□□□□□ -0.74
TCOF1-205ENST00000439160 OR1L4Q8NGR5 311 aa10.43□□□□□ -0.74
TCOF1-205ENST00000439160 OR4X1Q8NH49 305 aa10.43□□□□□ -0.74
TCOF1-205ENST00000439160 ZNF524Q96C55 264 aa10.43□□□□□ -0.74
TCOF1-205ENST00000439160 RBKSQ9H477 322 aa10.43□□□□□ -0.74
TCOF1-205ENST00000439160 LGALS7P47929 136 aa10.43□□□□□ -0.74
TCOF1-205ENST00000439160 ERVFRD-1P60508 538 aa10.43□□□□□ -0.74
TCOF1-205ENST00000439160 DOLPP1Q86YN1 238 aa10.43□□□□□ -0.74
TCOF1-205ENST00000439160 TECRQ9NZ01 308 aaKnown RBP10.43□□□□□ -0.74
TCOF1-205ENST00000439160 JPT1Q9UK76 154 aa10.43□□□□□ -0.74
TCOF1-205ENST00000439160 PLXND1Q9Y4D7 1925 aa10.43□□□□□ -0.74
TCOF1-205ENST00000439160 ZGRF1Q86YA3 2104 aa10.43□□□□□ -0.74
TCOF1-205ENST00000439160 DLL1O00548 723 aa10.42□□□□□ -0.74
TCOF1-205ENST00000439160 SLC25A17O43808 307 aa10.42□□□□□ -0.74
TCOF1-205ENST00000439160 PAX5Q02548 391 aa10.42□□□□□ -0.74
TCOF1-205ENST00000439160 SLC35E4Q6ICL7 350 aa10.42□□□□□ -0.74
TCOF1-205ENST00000439160 HCP5Q6MZN7 132 aa10.42□□□□□ -0.74
TCOF1-205ENST00000439160 ZNF705AQ6ZN79 300 aaPredicted RBP10.42□□□□□ -0.74
TCOF1-205ENST00000439160 AQP10Q96PS8 301 aa10.42□□□□□ -0.74
TCOF1-205ENST00000439160 ASCL3Q9NQ33 180 aa10.42□□□□□ -0.74
TCOF1-205ENST00000439160 TMEM140Q9NV12 185 aa10.42□□□□□ -0.74
TCOF1-205ENST00000439160 AURKAIP1Q9NWT8 199 aaPredicted RBP10.42□□□□□ -0.74
TCOF1-205ENST00000439160 GBF1Q92538 1859 aa10.42□□□□□ -0.74
TCOF1-205ENST00000439160 C7orf77A4D0Y5 90 aa10.42□□□□□ -0.74
TCOF1-205ENST00000439160 DBX1A6NMT0 343 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms