RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 ZNF90Q03938 601 aa9.82□□□□□ -0.84
TRAPPC9-202ENST00000438773 STUMQ69YW2 141 aa9.82□□□□□ -0.84
TRAPPC9-202ENST00000438773 TOMM20LQ6UXN7 152 aa9.82□□□□□ -0.84
TRAPPC9-202ENST00000438773 FOXL2NBQ6ZUU3 175 aa9.82□□□□□ -0.84
TRAPPC9-202ENST00000438773 RBMXL3Q8N7X1 1067 aaKnown RBP9.82□□□□□ -0.84
TRAPPC9-202ENST00000438773 OR1A1Q9P1Q5 309 aa9.82□□□□□ -0.84
TRAPPC9-202ENST00000438773 ONECUT1Q9UBC0 465 aa9.82□□□□□ -0.84
TRAPPC9-202ENST00000438773 CHD8Q9HCK8 2581 aa9.82□□□□□ -0.84
TRAPPC9-202ENST00000438773 ODAMA1E959 279 aa9.82□□□□□ -0.84
TRAPPC9-202ENST00000438773 NUDT19A8MXV4 375 aa9.82□□□□□ -0.84
TRAPPC9-202ENST00000438773 DKK1O94907 266 aa9.82□□□□□ -0.84
TRAPPC9-202ENST00000438773 CD200P41217 278 aa9.82□□□□□ -0.84
TRAPPC9-202ENST00000438773 HIST1H3AP68431 136 aa9.82□□□□□ -0.84
TRAPPC9-202ENST00000438773 DLK1P80370 383 aa9.82□□□□□ -0.84
TRAPPC9-202ENST00000438773 HGFACQ04756 655 aa9.82□□□□□ -0.84
TRAPPC9-202ENST00000438773 DHRS7BQ6IAN0 325 aaPredicted RBP9.82□□□□□ -0.84
TRAPPC9-202ENST00000438773 ZNF343Q6P1L6 599 aa9.82□□□□□ -0.84
TRAPPC9-202ENST00000438773 TMEM222Q9H0R3 208 aa9.82□□□□□ -0.84
TRAPPC9-202ENST00000438773 CISD1Q9NZ45 108 aaKnown RBP9.82□□□□□ -0.84
TRAPPC9-202ENST00000438773 ZDHHC8Q9ULC8 765 aa9.82□□□□□ -0.84
TRAPPC9-202ENST00000438773 C9JQL5 133 aa9.82□□□□□ -0.84
TRAPPC9-202ENST00000438773 E9PLN8 166 aa9.82□□□□□ -0.84
TRAPPC9-202ENST00000438773 TGOLN2O43493 480 aa9.82□□□□□ -0.84
TRAPPC9-202ENST00000438773 OPN1MWP04001 364 aa9.82□□□□□ -0.84
TRAPPC9-202ENST00000438773 OPN1MW2P0DN77 364 aa9.82□□□□□ -0.84
TRAPPC9-202ENST00000438773 OPN1MW3P0DN78 364 aa9.82□□□□□ -0.84
TRAPPC9-202ENST00000438773 CD40P25942 277 aa9.82□□□□□ -0.84
TRAPPC9-202ENST00000438773 DHRS11Q6UWP2 260 aa9.82□□□□□ -0.84
TRAPPC9-202ENST00000438773 OR4S2Q8NH73 311 aa9.82□□□□□ -0.84
TRAPPC9-202ENST00000438773 R3HDM4Q96D70 268 aa9.82□□□□□ -0.84
TRAPPC9-202ENST00000438773 CYTL1Q9NRR1 136 aa9.82□□□□□ -0.84
TRAPPC9-202ENST00000438773 LOC102724200A0A096LPH7 203 aaPredicted RBP9.82□□□□□ -0.84
TRAPPC9-202ENST00000438773 RBFOX3A6NFN3 312 aa9.82□□□□□ -0.84
TRAPPC9-202ENST00000438773 H3BQ15 152 aa9.82□□□□□ -0.84
TRAPPC9-202ENST00000438773 TRGC2P03986 189 aa9.82□□□□□ -0.84
TRAPPC9-202ENST00000438773 NTF4P34130 210 aa9.82□□□□□ -0.84
TRAPPC9-202ENST00000438773 G6PCP35575 357 aa9.82□□□□□ -0.84
TRAPPC9-202ENST00000438773 P2RY1P47900 373 aa9.82□□□□□ -0.84
TRAPPC9-202ENST00000438773 ZBTB34Q8NCN2 500 aa9.82□□□□□ -0.84
TRAPPC9-202ENST00000438773 RNF138Q8WVD3 245 aa9.82□□□□□ -0.84
TRAPPC9-202ENST00000438773 SAT2Q96F10 170 aaPredicted RBP9.82□□□□□ -0.84
TRAPPC9-202ENST00000438773 RARRES2Q99969 163 aa9.82□□□□□ -0.84
TRAPPC9-202ENST00000438773 SLC35D1Q9NTN3 355 aa9.82□□□□□ -0.84
TRAPPC9-202ENST00000438773 SLC25A10Q9UBX3 287 aaPredicted RBP9.82□□□□□ -0.84
TRAPPC9-202ENST00000438773 CACFD1Q9UGQ2 172 aa9.82□□□□□ -0.84
TRAPPC9-202ENST00000438773 XKRY2A2RUG3 117 aa9.81□□□□□ -0.84
TRAPPC9-202ENST00000438773 FGF16O43320 207 aa9.81□□□□□ -0.84
TRAPPC9-202ENST00000438773 CYB5R3P00387 301 aaPredicted RBP9.81□□□□□ -0.84
TRAPPC9-202ENST00000438773 TMEM11P17152 192 aa9.81□□□□□ -0.84
TRAPPC9-202ENST00000438773 DYNLT3P51808 116 aa9.81□□□□□ -0.84
TRAPPC9-202ENST00000438773 SLC38A11Q08AI6 406 aa9.81□□□□□ -0.84
TRAPPC9-202ENST00000438773 MST1LQ2TV78 715 aa9.81□□□□□ -0.84
TRAPPC9-202ENST00000438773 SLC35E1Q96K37 410 aa9.81□□□□□ -0.84
TRAPPC9-202ENST00000438773 HSD17B10Q99714 261 aaKnown RBP9.81□□□□□ -0.84
TRAPPC9-202ENST00000438773 ZNF355PQ9NSJ1 428 aa9.81□□□□□ -0.84
TRAPPC9-202ENST00000438773 IGKV1-27A0A075B6S5 117 aa9.81□□□□□ -0.84
TRAPPC9-202ENST00000438773 IQCF6A8MYZ5 107 aa9.81□□□□□ -0.84
TRAPPC9-202ENST00000438773 IGHG3P01860 377 aa9.81□□□□□ -0.84
TRAPPC9-202ENST00000438773 ZNRF1Q8ND25 227 aa9.81□□□□□ -0.84
TRAPPC9-202ENST00000438773 TMEM204Q9BSN7 226 aa9.81□□□□□ -0.84
TRAPPC9-202ENST00000438773 CXorf65A6NEN9 183 aa9.81□□□□□ -0.84
TRAPPC9-202ENST00000438773 PGLYRP1O75594 196 aaPredicted RBP9.81□□□□□ -0.84
TRAPPC9-202ENST00000438773 FAM157CP0CG43 387 aa9.81□□□□□ -0.84
TRAPPC9-202ENST00000438773 COX5AP20674 150 aa9.81□□□□□ -0.84
TRAPPC9-202ENST00000438773 FGF7P21781 194 aa9.81□□□□□ -0.84
TRAPPC9-202ENST00000438773 WDR25Q64LD2 544 aaPredicted RBP9.81□□□□□ -0.84
TRAPPC9-202ENST00000438773 PRR27Q6MZM9 219 aa9.81□□□□□ -0.84
TRAPPC9-202ENST00000438773 Q6ZS92 163 aa9.81□□□□□ -0.84
TRAPPC9-202ENST00000438773 RPEQ96AT9 228 aa9.81□□□□□ -0.84
TRAPPC9-202ENST00000438773 ADTRPQ96IZ2 230 aa9.81□□□□□ -0.84
TRAPPC9-202ENST00000438773 DIRC2Q96SL1 478 aa9.81□□□□□ -0.84
TRAPPC9-202ENST00000438773 SH3BGRL3Q9H299 93 aa9.81□□□□□ -0.84
TRAPPC9-202ENST00000438773 OR51I2Q9H344 312 aa9.81□□□□□ -0.84
TRAPPC9-202ENST00000438773 CLCF1Q9UBD9 225 aa9.81□□□□□ -0.84
TRAPPC9-202ENST00000438773 IL19Q9UHD0 177 aa9.81□□□□□ -0.84
TRAPPC9-202ENST00000438773 POMT1Q9Y6A1 747 aa9.81□□□□□ -0.84
TRAPPC9-202ENST00000438773 NCOA6Q14686 2063 aaPredicted RBP9.81□□□□□ -0.84
TRAPPC9-202ENST00000438773 SPG11Q96JI7 2443 aa9.81□□□□□ -0.84
TRAPPC9-202ENST00000438773 C1QTNF9BB2RNN3 333 aa9.8□□□□□ -0.84
TRAPPC9-202ENST00000438773 MBP02144 154 aa9.8□□□□□ -0.84
TRAPPC9-202ENST00000438773 C1QTNF9P0C862 333 aa9.8□□□□□ -0.84
TRAPPC9-202ENST00000438773 RTP5Q14D33 572 aa9.8□□□□□ -0.84
TRAPPC9-202ENST00000438773 C15orf54Q8N8G6 183 aa9.8□□□□□ -0.84
TRAPPC9-202ENST00000438773 CYB561D1Q8N8Q1 229 aa9.8□□□□□ -0.84
TRAPPC9-202ENST00000438773 MYO18BQ8IUG5 2567 aa9.8□□□□□ -0.84
TRAPPC9-202ENST00000438773 A0A1B0GU03 582 aa9.8□□□□□ -0.84
TRAPPC9-202ENST00000438773 A0A1W2PNU3 283 aaPredicted RBP9.8□□□□□ -0.84
TRAPPC9-202ENST00000438773 CLDN34H7C241 214 aa9.8□□□□□ -0.84
TRAPPC9-202ENST00000438773 PMCHP20382 165 aa9.8□□□□□ -0.84
TRAPPC9-202ENST00000438773 SRSF4Q08170 494 aaKnown RBP9.8□□□□□ -0.84
TRAPPC9-202ENST00000438773 ZNF818PQ6ZRF7 136 aa9.8□□□□□ -0.84
TRAPPC9-202ENST00000438773 SSX7Q7RTT5 188 aa9.8□□□□□ -0.84
TRAPPC9-202ENST00000438773 LINC01560Q8TB33 94 aa9.8□□□□□ -0.84
TRAPPC9-202ENST00000438773 STARD4Q96DR4 205 aa9.8□□□□□ -0.84
TRAPPC9-202ENST00000438773 PLSCR4Q9NRQ2 329 aa9.8□□□□□ -0.84
TRAPPC9-202ENST00000438773 ELOVL5Q9NYP7 299 aa9.8□□□□□ -0.84
TRAPPC9-202ENST00000438773 H0Y980 276 aa9.8□□□□□ -0.84
TRAPPC9-202ENST00000438773 EWSR1Q01844 656 aaKnown RBP eCLIP9.8□□□□□ -0.842e-6■■■■□ 21.2
TRAPPC9-202ENST00000438773 FAM201AQ5SY85 155 aa9.8□□□□□ -0.84
TRAPPC9-202ENST00000438773 TMEM171Q8WVE6 324 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms