RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 FBXL15Q9H469 300 aa2.31□□□□□ -2.04
LSM1P1-201ENST00000438629 EDA2RQ9HAV5 297 aa2.31□□□□□ -2.04
LSM1P1-201ENST00000438629 SLCO1B3Q9NPD5 702 aa2.31□□□□□ -2.04
LSM1P1-201ENST00000438629 TMEM38BQ9NVV0 291 aa2.31□□□□□ -2.04
LSM1P1-201ENST00000438629 MED29Q9NX70 200 aa2.31□□□□□ -2.04
LSM1P1-201ENST00000438629 METTL1Q9UBP6 276 aaKnown RBP2.31□□□□□ -2.04
LSM1P1-201ENST00000438629 ZNF230Q9UIE0 474 aaPredicted RBP2.31□□□□□ -2.04
LSM1P1-201ENST00000438629 PYCARDQ9ULZ3 195 aa2.31□□□□□ -2.04
LSM1P1-201ENST00000438629 UBIAD1Q9Y5Z9 338 aa2.31□□□□□ -2.04
LSM1P1-201ENST00000438629 F11RQ9Y624 299 aaKnown RBP2.31□□□□□ -2.04
LSM1P1-201ENST00000438629 RFNGQ9Y644 331 aa2.31□□□□□ -2.04
LSM1P1-201ENST00000438629 HSPE1-MOB4S4R3N1 261 aa2.31□□□□□ -2.04
LSM1P1-201ENST00000438629 U3KQ87 197 aa2.31□□□□□ -2.04
LSM1P1-201ENST00000438629 WDR62O43379 1518 aa2.31□□□□□ -2.04
LSM1P1-201ENST00000438629 IGHV1-69DA0A0B4J2H0 117 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 IGHV3-66A0A0C4DH42 116 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 A0A0J9YXV3 536 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 TMEM189A5PLL7 270 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 J3KT08 172 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 NDUFS5O43920 106 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 REM1O75628 298 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 GADD45GO95257 159 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 TCN2P20062 427 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 OR1E2P47887 323 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 REG1BP48304 166 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 SLC18A1P54219 525 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 CCL23P55773 120 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 SYNJ2BPP57105 145 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 LINC00315P59091 139 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 RAB5BP61020 215 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 HBG1P69891 147 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 HBG2P69892 147 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 PRR3P79522 188 aaKnown RBP2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 PLCXD2Q0VAA5 305 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 INCA1Q0VD86 236 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 EIF4EBP1Q13541 118 aaPredicted RBP2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 PMVKQ15126 192 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 ORMDL2Q53FV1 153 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 NANOGP8Q6NSW7 305 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 AGTRAPQ6RW13 159 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 ARL9Q6T311 187 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 CROCCP2Q86T23 111 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 MDP1Q86V88 176 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 CALHM3Q86XJ0 350 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 PDZD9Q8IXQ8 264 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 UBALD2Q8IYN6 164 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 GAPTQ8N292 157 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 OR51A2Q8NGJ7 313 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 OR9I1Q8NGQ6 314 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 OR2K2Q8NGT1 345 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 ZNF420Q8TAQ5 688 aaPredicted RBP2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 ARL11Q969Q4 196 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 SLC35G5Q96KT7 338 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 HSPB9Q9BQS6 159 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 ZNF649Q9BS31 505 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 SUCNR1Q9BXA5 334 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 SNHG12Q9BXW3 62 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 MROQ9BYG7 248 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 TMEM126AQ9H061 195 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 LPAR5Q9H1C0 372 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 CST9LQ9H4G1 147 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 HEBP1Q9NRV9 189 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 CISHQ9NSE2 258 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 C14orf105Q9NVL8 296 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 VAX2Q9UIW0 290 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 SCP2D1Q9UJQ7 156 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 ERG28Q9UKR5 140 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 SNX12Q9UMY4 172 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 ZNF780BQ9Y6R6 833 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 TMEM2Q9UHN6 1383 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 FMN1Q68DA7 1419 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 SSH2Q76I76 1423 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 DENND4BO75064 1496 aaPredicted RBP2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 KDM5DQ9BY66 1539 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 ADAMTS12P58397 1594 aa2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 INO80Q9ULG1 1556 aaPredicted RBP2.3□□□□□ -2.04
LSM1P1-201ENST00000438629 FOCADQ5VW36 1801 aa2.29□□□□□ -2.04
LSM1P1-201ENST00000438629 ANKRD26Q9UPS8 1709 aa2.29□□□□□ -2.04
LSM1P1-201ENST00000438629 BCL9LQ86UU0 1499 aa2.29□□□□□ -2.04
LSM1P1-201ENST00000438629 TEX14Q8IWB6 1497 aa2.29□□□□□ -2.04
LSM1P1-201ENST00000438629 MBD5Q9P267 1494 aa2.29□□□□□ -2.04
LSM1P1-201ENST00000438629 DAPK1P53355 1430 aa2.29□□□□□ -2.04
LSM1P1-201ENST00000438629 TRAV36DV7A0A075B6V5 113 aa2.29□□□□□ -2.04
LSM1P1-201ENST00000438629 TRAV19A0A0A6YYK7 116 aa2.29□□□□□ -2.04
LSM1P1-201ENST00000438629 BORCS7-ASMTA0A0B4J1R7 106 aa2.29□□□□□ -2.04
LSM1P1-201ENST00000438629 TRAV8-2A0A0B4J237 113 aa2.29□□□□□ -2.04
LSM1P1-201ENST00000438629 A0A0J9YY10 115 aa2.29□□□□□ -2.04
LSM1P1-201ENST00000438629 A0A1B0GX51 115 aa2.29□□□□□ -2.04
LSM1P1-201ENST00000438629 A0A1B0GX78 115 aa2.29□□□□□ -2.04
LSM1P1-201ENST00000438629 KRBOX1C9JBD0 128 aa2.29□□□□□ -2.04
LSM1P1-201ENST00000438629 CORTO00230 105 aa2.29□□□□□ -2.04
LSM1P1-201ENST00000438629 PSPHP1O15172 72 aa2.29□□□□□ -2.04
LSM1P1-201ENST00000438629 CD5LO43866 347 aa2.29□□□□□ -2.04
LSM1P1-201ENST00000438629 GCM2O75603 506 aaPredicted RBP2.29□□□□□ -2.04
LSM1P1-201ENST00000438629 APOA2P02652 100 aa2.29□□□□□ -2.04
LSM1P1-201ENST00000438629 HLA-DPB1P04440 258 aa2.29□□□□□ -2.04
LSM1P1-201ENST00000438629 REG1AP05451 166 aa2.29□□□□□ -2.04
LSM1P1-201ENST00000438629 PFN1P07737 140 aaKnown RBP2.29□□□□□ -2.04
LSM1P1-201ENST00000438629 CD79AP11912 226 aa2.29□□□□□ -2.04
LSM1P1-201ENST00000438629 KDELR1P24390 212 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms