RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 ZNF696Q9H7X3 374 aa2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 CACYBPQ9HB71 228 aaKnown RBP2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 PDFQ9HBH1 243 aa2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 TMEM216Q9P0N5 145 aa2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 NAT8BQ9UHF3 227 aa2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 TRMT112Q9UI30 125 aaKnown RBP2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 ZNF230Q9UIE0 474 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 TNFSF18Q9UNG2 199 aa2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 HIGD1AQ9Y241 93 aa2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 KLF13Q9Y2Y9 288 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 NEUROG3Q9Y4Z2 214 aa2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 HES2Q9Y543 173 aa2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 PCYT1BQ9Y5K3 369 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 DCCP43146 1447 aa2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 ABCA8O94911 1581 aa2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 CEP170Q5SW79 1584 aa2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 SCN5AQ14524 2016 aa2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 TONSLQ96HA7 1378 aa2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 GRIN2AQ12879 1464 aa2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 DNMT1P26358 1616 aaKnown RBP2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 IGHV2-26A0A0B4J1V2 119 aa2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 TRAV4A0A0B4J268 109 aa2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 HFM1A2PYH4 1435 aa2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 OR4C45A6NMZ5 311 aa2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 FABP5P3A8MUU1 101 aa2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 CORTO00230 105 aa2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 SAP18O00422 153 aaKnown RBP2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 SNAP91O60641 907 aa2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 LMX1BO60663 402 aa2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 ZNF354AO60765 605 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 ZNF780AO75290 641 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 SRSF10O75494 262 aaKnown RBP2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 GYPCP04921 128 aa2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 SCTP09683 121 aa2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 OR4Q2P0C623 313 aa2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 PSG2P11465 335 aa2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 AZU1P20160 251 aa2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 HSPA9P38646 679 aaKnown RBP2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 ATP5G3P48201 142 aa2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 TAF6P49848 677 aa2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 ZNF140P52738 457 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 MP68P56378 58 aa2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 PPP3R1P63098 170 aa2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 TGIF1Q15583 401 aa2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 SSX1Q16384 188 aa2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 ZFP69Q49AA0 526 aa2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 CCSMST1Q4G0I0 132 aa2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 GLYATL3Q5SZD4 288 aa2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 STPG1Q5TH74 334 aa2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 FMN1Q68DA7 1419 aa2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 DNAJC24Q6P3W2 148 aa2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 UNQ9165/PRO28630Q6UXU0 137 aa2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 RFLNAQ6ZTI6 216 aa2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 SSH2Q76I76 1423 aa2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 NFE4Q86UQ8 179 aa2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 TMEM75Q8N9X5 138 aa2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 TMEM229BQ8NBD8 167 aa2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 OR4E2Q8NGC2 313 aa2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 OR2G3Q8NGZ4 309 aa2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 OR2T27Q8NH04 317 aa2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 FNDC9Q8TBE3 224 aa2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 DCAKDQ8WVC6 231 aa2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 CARD19Q96LW7 228 aa2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 IGF2BP2-AS1Q96M15 143 aa2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 TMEM243Q9BU79 118 aa2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 SAMD10Q9BYL1 202 aa2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 IFI27L2Q9H2X8 130 aa2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 ZNF702PQ9H963 129 aa2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 SPHK2Q9NRA0 654 aa2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 MARCH5Q9NX47 278 aa2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 TBX21Q9UL17 535 aa2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 TRAPPC2LQ9UL33 140 aa2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 ANAPC10Q9UM13 185 aa2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 POMPQ9Y244 141 aa2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 HS3ST2Q9Y278 367 aa2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 HEBP2Q9Y5Z4 205 aa2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 F11RQ9Y624 299 aaKnown RBP2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 KDM5DQ9BY66 1539 aa2.72□□□□□ -1.97
HMGB1P12-201ENST00000438594 PTPN23Q9H3S7 1636 aa2.71□□□□□ -1.97
HMGB1P12-201ENST00000438594 ARHGAP23Q9P227 1491 aa2.71□□□□□ -1.97
HMGB1P12-201ENST00000438594 CCL15-CCL14A0A0B4J2E2 113 aa2.71□□□□□ -1.98
HMGB1P12-201ENST00000438594 A0A0X1KG70 313 aa2.71□□□□□ -1.98
HMGB1P12-201ENST00000438594 CIB4A0PJX0 185 aa2.71□□□□□ -1.98
HMGB1P12-201ENST00000438594 RIIAD1A6NNX1 92 aa2.71□□□□□ -1.98
HMGB1P12-201ENST00000438594 H7BYZ3 331 aa2.71□□□□□ -1.98
HMGB1P12-201ENST00000438594 TRAF3IP2O43734 574 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P12-201ENST00000438594 OR2H2O95918 312 aa2.71□□□□□ -1.98
HMGB1P12-201ENST00000438594 NRASP01111 189 aa2.71□□□□□ -1.98
HMGB1P12-201ENST00000438594 SOD3P08294 240 aa2.71□□□□□ -1.98
HMGB1P12-201ENST00000438594 OR12D1P0DN82 309 aa2.71□□□□□ -1.98
HMGB1P12-201ENST00000438594 RPS4Y1P22090 263 aaKnown RBP2.71□□□□□ -1.98
HMGB1P12-201ENST00000438594 PPP1CCP36873 323 aaKnown RBP2.71□□□□□ -1.98
HMGB1P12-201ENST00000438594 GABRA2P47869 451 aa2.71□□□□□ -1.98
HMGB1P12-201ENST00000438594 CXCL12P48061 93 aa2.71□□□□□ -1.98
HMGB1P12-201ENST00000438594 SYNJ2BPP57105 145 aa2.71□□□□□ -1.98
HMGB1P12-201ENST00000438594 NCS1P62166 190 aa2.71□□□□□ -1.98
HMGB1P12-201ENST00000438594 RPS25P62851 125 aaKnown RBP2.71□□□□□ -1.98
HMGB1P12-201ENST00000438594 RBMY1FQ15415 496 aaKnown RBP2.71□□□□□ -1.98
HMGB1P12-201ENST00000438594 CCL15Q16663 113 aa2.71□□□□□ -1.98
HMGB1P12-201ENST00000438594 ZNF181Q2M3W8 571 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms