RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 CACFD1Q9UGQ2 172 aa21.25■□□□□ 0.99
CPNE1-216ENST00000437340 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP21.25■□□□□ 0.99
CPNE1-216ENST00000437340 TMEM218A2RU14 115 aa21.25■□□□□ 0.99
CPNE1-216ENST00000437340 TRIM77I1YAP6 450 aa21.25■□□□□ 0.99
CPNE1-216ENST00000437340 RBFOX2O43251 390 aaKnown RBP eCLIP21.25■□□□□ 0.997e-8■■■■□ 26.3
CPNE1-216ENST00000437340 ZNF134P52741 427 aa21.25■□□□□ 0.99
CPNE1-216ENST00000437340 TNFRSF9Q07011 255 aa21.25■□□□□ 0.99
CPNE1-216ENST00000437340 TMEM217Q8N7C4 229 aa21.25■□□□□ 0.99
CPNE1-216ENST00000437340 ZNF436-AS1Q8NC38 126 aaPredicted RBP21.25■□□□□ 0.99
CPNE1-216ENST00000437340 GNPNAT1Q96EK6 184 aaPredicted RBP21.25■□□□□ 0.99
CPNE1-216ENST00000437340 LRRC46Q96FV0 321 aa21.25■□□□□ 0.99
CPNE1-216ENST00000437340 SH3BGRL3Q9H299 93 aa21.25■□□□□ 0.99
CPNE1-216ENST00000437340 PPIAL4EA0A075B759 164 aa21.24■□□□□ 0.99
CPNE1-216ENST00000437340 B9A039 149 aa21.24■□□□□ 0.99
CPNE1-216ENST00000437340 PPIAL4DF5H284 164 aa21.24■□□□□ 0.99
CPNE1-216ENST00000437340 SCO1O75880 301 aa21.24■□□□□ 0.99
CPNE1-216ENST00000437340 PPIAL4FP0DN26 164 aa21.24■□□□□ 0.99
CPNE1-216ENST00000437340 NCR3LG1Q68D85 454 aa21.24■□□□□ 0.99
CPNE1-216ENST00000437340 TCF23Q7RTU1 214 aa21.24■□□□□ 0.99
CPNE1-216ENST00000437340 NARS2Q96I59 477 aaKnown RBP21.24■□□□□ 0.99
CPNE1-216ENST00000437340 ABHD14AQ9BUJ0 271 aa21.24■□□□□ 0.99
CPNE1-216ENST00000437340 DYNLRB1Q9NP97 96 aa21.24■□□□□ 0.99
CPNE1-216ENST00000437340 IDI2-AS1Q9NZ38 188 aa21.24■□□□□ 0.99
CPNE1-216ENST00000437340 PPIAL4AQ9Y536 164 aa21.24■□□□□ 0.99
CPNE1-216ENST00000437340 hADV38S2A0JD32 116 aa21.23■□□□□ 0.99
CPNE1-216ENST00000437340 FAM90A27PA6NNH2 459 aa21.23■□□□□ 0.99
CPNE1-216ENST00000437340 IAPPP10997 89 aa21.23■□□□□ 0.99
CPNE1-216ENST00000437340 ATP6V0CP27449 155 aa21.23■□□□□ 0.99
CPNE1-216ENST00000437340 H2BFWTQ7Z2G1 175 aa21.23■□□□□ 0.99
CPNE1-216ENST00000437340 TMEM106BQ9NUM4 274 aa21.23■□□□□ 0.99
CPNE1-216ENST00000437340 UMAD1C9J7I0 102 aa21.23■□□□□ 0.99
CPNE1-216ENST00000437340 H3BP45 60 aa21.23■□□□□ 0.99
CPNE1-216ENST00000437340 TMPRSS2O15393 492 aa21.23■□□□□ 0.99
CPNE1-216ENST00000437340 HPRT1P00492 218 aa21.23■□□□□ 0.99
CPNE1-216ENST00000437340 KIR2DS2P43631 304 aa21.23■□□□□ 0.99
CPNE1-216ENST00000437340 ARHGDIBP52566 201 aa21.23■□□□□ 0.99
CPNE1-216ENST00000437340 MEF2CQ06413 473 aaPredicted RBP21.23■□□□□ 0.99
CPNE1-216ENST00000437340 COMMD1Q8N668 190 aa21.23■□□□□ 0.99
CPNE1-216ENST00000437340 LINC00312Q9Y6C7 94 aa21.23■□□□□ 0.99
CPNE1-216ENST00000437340 FAM90A9PA6NNJ1 464 aa21.22■□□□□ 0.99
CPNE1-216ENST00000437340 M0R1X1 148 aa21.22■□□□□ 0.99
CPNE1-216ENST00000437340 UQCRFS1P47985 274 aa21.22■□□□□ 0.99
CPNE1-216ENST00000437340 CAMLGP49069 296 aa21.22■□□□□ 0.99
CPNE1-216ENST00000437340 PRELID3BQ9Y3B1 194 aa21.22■□□□□ 0.99
CPNE1-216ENST00000437340 DIDO1Q9BTC0 2240 aaKnown RBP21.22■□□□□ 0.99
CPNE1-216ENST00000437340 DSCAML1Q8TD84 2053 aa21.22■□□□□ 0.99
CPNE1-216ENST00000437340 MARCH11A6NNE9 402 aa21.21■□□□□ 0.99
CPNE1-216ENST00000437340 APOC3P02656 99 aa21.21■□□□□ 0.99
CPNE1-216ENST00000437340 OR10A7Q8NGE5 316 aa21.21■□□□□ 0.99
CPNE1-216ENST00000437340 OR2G3Q8NGZ4 309 aa21.21■□□□□ 0.99
CPNE1-216ENST00000437340 NEUROG1Q92886 237 aa21.21■□□□□ 0.99
CPNE1-216ENST00000437340 RBKSQ9H477 322 aa21.21■□□□□ 0.99
CPNE1-216ENST00000437340 SLC25A10Q9UBX3 287 aaPredicted RBP21.21■□□□□ 0.99
CPNE1-216ENST00000437340 CFAP46Q8IYW2 2715 aa21.21■□□□□ 0.99
CPNE1-216ENST00000437340 RAI1Q7Z5J4 1906 aaPredicted RBP21.2■□□□□ 0.99
CPNE1-216ENST00000437340 B8ZZF3 427 aa21.2■□□□□ 0.99
CPNE1-216ENST00000437340 HBG1P69891 147 aa21.2■□□□□ 0.99
CPNE1-216ENST00000437340 HBG2P69892 147 aa21.2■□□□□ 0.99
CPNE1-216ENST00000437340 TMEM267Q0VDI3 215 aaPredicted RBP21.2■□□□□ 0.99
CPNE1-216ENST00000437340 CT45A1Q5HYN5 189 aa21.2■□□□□ 0.99
CPNE1-216ENST00000437340 CT45A3Q8NHU0 189 aa21.2■□□□□ 0.99
CPNE1-216ENST00000437340 LINC01560Q8TB33 94 aa21.2■□□□□ 0.99
CPNE1-216ENST00000437340 C19orf12Q9NSK7 152 aa21.2■□□□□ 0.99
CPNE1-216ENST00000437340 HIVEP3Q5T1R4 2406 aa21.2■□□□□ 0.98
CPNE1-216ENST00000437340 TNFRSF13BO14836 293 aaPredicted RBP21.2■□□□□ 0.98
CPNE1-216ENST00000437340 SLC31A2O15432 143 aa21.2■□□□□ 0.98
CPNE1-216ENST00000437340 IFNA5P01569 189 aa21.2■□□□□ 0.98
CPNE1-216ENST00000437340 PRH1P02810 166 aa21.2■□□□□ 0.98
CPNE1-216ENST00000437340 GNLYP22749 145 aa21.2■□□□□ 0.98
CPNE1-216ENST00000437340 LINC00205P59089 165 aa21.2■□□□□ 0.98
CPNE1-216ENST00000437340 CDSNQ15517 529 aa21.2■□□□□ 0.98
CPNE1-216ENST00000437340 TMEM182Q6ZP80 229 aaPredicted RBP21.2■□□□□ 0.98
CPNE1-216ENST00000437340 ZNF439Q8NDP4 499 aa21.2■□□□□ 0.98
CPNE1-216ENST00000437340 CCL17Q92583 94 aa21.2■□□□□ 0.98
CPNE1-216ENST00000437340 R3HDM4Q96D70 268 aa21.2■□□□□ 0.98
CPNE1-216ENST00000437340 BBC3Q96PG8 261 aaPredicted RBP21.2■□□□□ 0.98
CPNE1-216ENST00000437340 FCGR3BO75015 233 aa21.19■□□□□ 0.98
CPNE1-216ENST00000437340 TSPAN15O95858 294 aa21.19■□□□□ 0.98
CPNE1-216ENST00000437340 NDUFB7P17568 137 aa21.19■□□□□ 0.98
CPNE1-216ENST00000437340 SRSF3P84103 164 aaKnown RBP21.19■□□□□ 0.98
CPNE1-216ENST00000437340 RPL39P5Q59GN2 51 aa21.19■□□□□ 0.98
CPNE1-216ENST00000437340 S1PR3Q99500 378 aa21.19■□□□□ 0.98
CPNE1-216ENST00000437340 RPUSD1Q9UJJ7 312 aaKnown RBP21.19■□□□□ 0.98
CPNE1-216ENST00000437340 EPG5Q9HCE0 2579 aa21.18■□□□□ 0.98
CPNE1-216ENST00000437340 AARDQ4LEZ3 155 aa21.18■□□□□ 0.98
CPNE1-216ENST00000437340 C10orf91Q5T1B1 145 aa21.18■□□□□ 0.98
CPNE1-216ENST00000437340 TMEM14EPQ6UXP3 125 aa21.18■□□□□ 0.98
CPNE1-216ENST00000437340 CIB3Q96Q77 187 aaPredicted RBP21.18■□□□□ 0.98
CPNE1-216ENST00000437340 GAL3ST2Q9H3Q3 398 aa21.18■□□□□ 0.98
CPNE1-216ENST00000437340 TREM1Q9NP99 234 aa21.18■□□□□ 0.98
CPNE1-216ENST00000437340 UQCC1Q9NVA1 299 aa21.18■□□□□ 0.98
CPNE1-216ENST00000437340 TANC2Q9HCD6 1990 aa21.18■□□□□ 0.98
CPNE1-216ENST00000437340 ROS1P08922 2347 aa21.18■□□□□ 0.98
CPNE1-216ENST00000437340 CD5P06127 495 aa21.18■□□□□ 0.98
CPNE1-216ENST00000437340 METTL15P1P0C7V9 234 aa21.18■□□□□ 0.98
CPNE1-216ENST00000437340 AKR1C1Q04828 323 aa21.18■□□□□ 0.98
CPNE1-216ENST00000437340 ZNF616Q08AN1 781 aa21.18■□□□□ 0.98
CPNE1-216ENST00000437340 SUN5Q8TC36 379 aa21.18■□□□□ 0.98
CPNE1-216ENST00000437340 DDB2Q92466 427 aa21.18■□□□□ 0.98
CPNE1-216ENST00000437340 CISD1Q9NZ45 108 aaKnown RBP21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms