RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 DTYMKP23919 212 aa14.29□□□□□ -0.12
HMGN1-207ENST00000436324 GNG2P59768 71 aa14.29□□□□□ -0.12
HMGN1-207ENST00000436324 KRTAP10-11P60412 298 aa14.29□□□□□ -0.12
HMGN1-207ENST00000436324 HACD4Q5VWC8 232 aa14.29□□□□□ -0.12
HMGN1-207ENST00000436324 ZNF660Q6AZW8 331 aaPredicted RBP14.29□□□□□ -0.12
HMGN1-207ENST00000436324 C5orf30Q96GV9 206 aa14.29□□□□□ -0.12
HMGN1-207ENST00000436324 OR5B12Q96R08 314 aa14.29□□□□□ -0.12
HMGN1-207ENST00000436324 TSNAXQ99598 290 aaKnown RBP14.29□□□□□ -0.12
HMGN1-207ENST00000436324 RNF5Q99942 180 aa14.29□□□□□ -0.12
HMGN1-207ENST00000436324 RHBDL2Q9NX52 303 aa14.29□□□□□ -0.12
HMGN1-207ENST00000436324 TGFBR1P36897 503 aa14.28□□□□□ -0.12
HMGN1-207ENST00000436324 SRSF7Q16629 238 aaKnown RBP eCLIP14.28□□□□□ -0.12
HMGN1-207ENST00000436324 ZNF260Q3ZCT1 412 aa14.28□□□□□ -0.12
HMGN1-207ENST00000436324 PDPNQ86YL7 162 aa14.28□□□□□ -0.12
HMGN1-207ENST00000436324 H1FOOQ8IZA3 346 aaPredicted RBP14.28□□□□□ -0.12
HMGN1-207ENST00000436324 CASTOR1Q8WTX7 329 aa14.28□□□□□ -0.12
HMGN1-207ENST00000436324 C4orf3Q8WVX3 66 aa14.28□□□□□ -0.12
HMGN1-207ENST00000436324 FLYWCH2Q96CP2 140 aaKnown RBP14.28□□□□□ -0.12
HMGN1-207ENST00000436324 FAM103A1Q9BTL3 118 aaKnown RBP14.28□□□□□ -0.12
HMGN1-207ENST00000436324 GNB4Q9HAV0 340 aa14.28□□□□□ -0.12
HMGN1-207ENST00000436324 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.28□□□□□ -0.12
HMGN1-207ENST00000436324 TPSG1Q9NRR2 321 aa14.28□□□□□ -0.12
HMGN1-207ENST00000436324 A0A1W2PN81 502 aa14.27□□□□□ -0.13
HMGN1-207ENST00000436324 SLC25A17O43808 307 aa14.27□□□□□ -0.13
HMGN1-207ENST00000436324 SCGNO76038 276 aa14.27□□□□□ -0.13
HMGN1-207ENST00000436324 DIRAS3O95661 229 aa14.27□□□□□ -0.13
HMGN1-207ENST00000436324 CA2P00918 260 aa14.27□□□□□ -0.13
HMGN1-207ENST00000436324 CHRNA7P36544 502 aa14.27□□□□□ -0.13
HMGN1-207ENST00000436324 Q6ZS49 121 aa14.27□□□□□ -0.13
HMGN1-207ENST00000436324 PPP1R27Q86WC6 154 aa14.27□□□□□ -0.13
HMGN1-207ENST00000436324 MINDY2Q8NBR6 621 aa14.27□□□□□ -0.13
HMGN1-207ENST00000436324 BVESQ8NE79 360 aa14.27□□□□□ -0.13
HMGN1-207ENST00000436324 TSPAN14Q8NG11 270 aa14.27□□□□□ -0.13
HMGN1-207ENST00000436324 MCRIP2Q9BUT9 160 aaKnown RBP14.27□□□□□ -0.13
HMGN1-207ENST00000436324 TRAV18A0A075B6X5 111 aa14.26□□□□□ -0.13
HMGN1-207ENST00000436324 A0A087WXM4 84 aa14.26□□□□□ -0.13
HMGN1-207ENST00000436324 SSX5O60225 188 aa14.26□□□□□ -0.13
HMGN1-207ENST00000436324 IGLV1-40P01703 118 aa14.26□□□□□ -0.13
HMGN1-207ENST00000436324 EGR2P11161 476 aaPredicted RBP14.26□□□□□ -0.13
HMGN1-207ENST00000436324 NFYAP23511 347 aaPredicted RBP14.26□□□□□ -0.13
HMGN1-207ENST00000436324 RAB9AP51151 201 aa14.26□□□□□ -0.13
HMGN1-207ENST00000436324 LSM3P62310 102 aaKnown RBP14.26□□□□□ -0.13
HMGN1-207ENST00000436324 KIAA0141Q14154 515 aaPredicted RBP14.26□□□□□ -0.13
HMGN1-207ENST00000436324 UNQ5815/PRO19632Q6UWF5 114 aa14.26□□□□□ -0.13
HMGN1-207ENST00000436324 ZNF491Q8N8L2 437 aa14.26□□□□□ -0.13
HMGN1-207ENST00000436324 OR11H1Q8NG94 326 aa14.26□□□□□ -0.13
HMGN1-207ENST00000436324 DPF1Q92782 380 aa14.26□□□□□ -0.13
HMGN1-207ENST00000436324 SLC25A38Q96DW6 304 aa14.26□□□□□ -0.13
HMGN1-207ENST00000436324 GPR61Q9BZJ8 451 aa14.26□□□□□ -0.13
HMGN1-207ENST00000436324 VSIG4Q9Y279 399 aa14.26□□□□□ -0.13
HMGN1-207ENST00000436324 NUBP2Q9Y5Y2 271 aa14.26□□□□□ -0.13
HMGN1-207ENST00000436324 PRKDCP78527 4128 aaKnown RBP14.26□□□□□ -0.13
HMGN1-207ENST00000436324 SOX15O60248 233 aa14.25□□□□□ -0.13
HMGN1-207ENST00000436324 SPDEFO95238 335 aa14.25□□□□□ -0.13
HMGN1-207ENST00000436324 GNB1P62873 340 aa14.25□□□□□ -0.13
HMGN1-207ENST00000436324 PITPNAQ00169 270 aa14.25□□□□□ -0.13
HMGN1-207ENST00000436324 TMEM267Q0VDI3 215 aaPredicted RBP14.25□□□□□ -0.13
HMGN1-207ENST00000436324 GRPEL2Q8TAA5 225 aa14.25□□□□□ -0.13
HMGN1-207ENST00000436324 MYOZ3Q8TDC0 251 aa14.25□□□□□ -0.13
HMGN1-207ENST00000436324 UBE2E2Q96LR5 201 aa14.25□□□□□ -0.13
HMGN1-207ENST00000436324 DCSTAMPQ9H295 470 aa14.25□□□□□ -0.13
HMGN1-207ENST00000436324 VCX3AQ9NNX9 186 aa14.25□□□□□ -0.13
HMGN1-207ENST00000436324 FOXA2Q9Y261 457 aaPredicted RBP14.25□□□□□ -0.13
HMGN1-207ENST00000436324 ETV7Q9Y603 341 aa14.25□□□□□ -0.13
HMGN1-207ENST00000436324 WI2-2373I1.2A0A1W2PRP0 233 aa14.24□□□□□ -0.13
HMGN1-207ENST00000436324 K7EIL1 84 aa14.24□□□□□ -0.13
HMGN1-207ENST00000436324 SHOXO15266 292 aa14.24□□□□□ -0.13
HMGN1-207ENST00000436324 AIREO43918 545 aa14.24□□□□□ -0.13
HMGN1-207ENST00000436324 TNFAIP8O95379 198 aa14.24□□□□□ -0.13
HMGN1-207ENST00000436324 IGLV2-23P01705 113 aa14.24□□□□□ -0.13
HMGN1-207ENST00000436324 FCER2P06734 321 aa14.24□□□□□ -0.13
HMGN1-207ENST00000436324 CRIP2P52943 208 aaPredicted RBP14.24□□□□□ -0.13
HMGN1-207ENST00000436324 CBX3Q13185 183 aa14.24□□□□□ -0.13
HMGN1-207ENST00000436324 FXYD3Q14802 87 aa14.24□□□□□ -0.13
HMGN1-207ENST00000436324 RTL8BQ17RB0 113 aa14.24□□□□□ -0.13
HMGN1-207ENST00000436324 TIMM50Q3ZCQ8 353 aa14.24□□□□□ -0.13
HMGN1-207ENST00000436324 C19orf54Q5BKX5 351 aa14.24□□□□□ -0.13
HMGN1-207ENST00000436324 ZNF562Q6V9R5 426 aa14.24□□□□□ -0.13
HMGN1-207ENST00000436324 LFNGQ8NES3 379 aa14.24□□□□□ -0.13
HMGN1-207ENST00000436324 OR5M8Q8NGP6 311 aa14.24□□□□□ -0.13
HMGN1-207ENST00000436324 YIPF6Q96EC8 236 aa14.24□□□□□ -0.13
HMGN1-207ENST00000436324 HARBI1Q96MB7 349 aa14.24□□□□□ -0.13
HMGN1-207ENST00000436324 MS4A10Q96PG2 267 aa14.24□□□□□ -0.13
HMGN1-207ENST00000436324 ARPC1BO15143 372 aaKnown RBP14.23□□□□□ -0.13
HMGN1-207ENST00000436324 CNIH1O95406 144 aa14.23□□□□□ -0.13
HMGN1-207ENST00000436324 CTXN2P0C2S0 81 aa14.23□□□□□ -0.13
HMGN1-207ENST00000436324 LUMP51884 338 aaPredicted RBP14.23□□□□□ -0.13
HMGN1-207ENST00000436324 PJVKQ0ZLH3 352 aa14.23□□□□□ -0.13
HMGN1-207ENST00000436324 ACTBL2Q562R1 376 aa14.23□□□□□ -0.13
HMGN1-207ENST00000436324 DEFB121Q5J5C9 76 aa14.23□□□□□ -0.13
HMGN1-207ENST00000436324 CNIH2Q6PI25 160 aa14.23□□□□□ -0.13
HMGN1-207ENST00000436324 OR1N2Q8NGR9 330 aa14.23□□□□□ -0.13
HMGN1-207ENST00000436324 ARPC1AQ92747 370 aa14.23□□□□□ -0.13
HMGN1-207ENST00000436324 ALX4Q9H161 411 aaPredicted RBP14.23□□□□□ -0.13
HMGN1-207ENST00000436324 TGP01266 2768 aa14.22□□□□□ -0.13
HMGN1-207ENST00000436324 SRRM4A7MD48 611 aaKnown RBP14.22□□□□□ -0.13
HMGN1-207ENST00000436324 LINC00473A8K010 186 aa14.22□□□□□ -0.13
HMGN1-207ENST00000436324 I3L521 148 aa14.22□□□□□ -0.13
HMGN1-207ENST00000436324 PTHLHP12272 177 aa14.22□□□□□ -0.13
HMGN1-207ENST00000436324 DUTP33316 252 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms