RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 IFNA10P01566 189 aa13.1□□□□□ -0.31
SCARF1-203ENST00000434376 CCL8P80075 99 aa13.1□□□□□ -0.31
SCARF1-203ENST00000434376 UTF1Q5T230 341 aa13.1□□□□□ -0.31
SCARF1-203ENST00000434376 Q6ZT83 130 aa13.1□□□□□ -0.31
SCARF1-203ENST00000434376 C1orf87Q8N0U7 546 aa13.1□□□□□ -0.31
SCARF1-203ENST00000434376 SNIP1Q8TAD8 396 aaKnown RBP13.1□□□□□ -0.31
SCARF1-203ENST00000434376 GALNT14Q96FL9 552 aa13.1□□□□□ -0.31
SCARF1-203ENST00000434376 ZNF665Q9H7R5 613 aa13.1□□□□□ -0.31
SCARF1-203ENST00000434376 ZNRD1Q9P1U0 126 aa13.1□□□□□ -0.31
SCARF1-203ENST00000434376 GALR2O43603 387 aaPredicted RBP13.1□□□□□ -0.31
SCARF1-203ENST00000434376 ECI1P42126 302 aa13.1□□□□□ -0.31
SCARF1-203ENST00000434376 HIST3H2BBQ8N257 126 aa13.1□□□□□ -0.31
SCARF1-203ENST00000434376 LYPD6BQ8NI32 183 aa13.1□□□□□ -0.31
SCARF1-203ENST00000434376 ZDHHC16Q969W1 377 aa13.1□□□□□ -0.31
SCARF1-203ENST00000434376 C12orf77C9JDV5 145 aa13.1□□□□□ -0.31
SCARF1-203ENST00000434376 TESK1Q15569 626 aa13.1□□□□□ -0.31
SCARF1-203ENST00000434376 MSMPQ1L6U9 139 aa13.1□□□□□ -0.31
SCARF1-203ENST00000434376 DRAM1Q8N682 238 aa13.1□□□□□ -0.31
SCARF1-203ENST00000434376 OR13A1Q8NGR1 328 aa13.1□□□□□ -0.31
SCARF1-203ENST00000434376 BOD1Q96IK1 185 aa13.1□□□□□ -0.31
SCARF1-203ENST00000434376 POLDIP2Q9Y2S7 368 aa13.1□□□□□ -0.31
SCARF1-203ENST00000434376 UBE2L5PA0A1B0GUS4 154 aa13.09□□□□□ -0.31
SCARF1-203ENST00000434376 HBZP02008 142 aa13.09□□□□□ -0.31
SCARF1-203ENST00000434376 RAC2P15153 192 aa13.09□□□□□ -0.31
SCARF1-203ENST00000434376 VDAC1P21796 283 aa13.09□□□□□ -0.31
SCARF1-203ENST00000434376 GNG10P50151 68 aa13.09□□□□□ -0.31
SCARF1-203ENST00000434376 KRTAP27-1Q3LI81 207 aa13.09□□□□□ -0.31
SCARF1-203ENST00000434376 ABHD5Q8WTS1 349 aa13.09□□□□□ -0.31
SCARF1-203ENST00000434376 VSIRQ9H7M9 311 aa13.09□□□□□ -0.31
SCARF1-203ENST00000434376 SSTP61278 116 aa13.09□□□□□ -0.31
SCARF1-203ENST00000434376 RPL30P62888 115 aaKnown RBP13.09□□□□□ -0.31
SCARF1-203ENST00000434376 IL13RA2Q14627 380 aa13.09□□□□□ -0.31
SCARF1-203ENST00000434376 IL36GQ9NZH8 169 aa13.09□□□□□ -0.31
SCARF1-203ENST00000434376 ICAM4Q14773 271 aa13.08□□□□□ -0.31
SCARF1-203ENST00000434376 C21orf62-AS1Q17RA5 79 aa13.08□□□□□ -0.31
SCARF1-203ENST00000434376 ZNF718Q3SXZ3 478 aa13.08□□□□□ -0.31
SCARF1-203ENST00000434376 TMEM37Q8WXS4 190 aa13.08□□□□□ -0.31
SCARF1-203ENST00000434376 RPUSD4Q96CM3 377 aaKnown RBP13.08□□□□□ -0.31
SCARF1-203ENST00000434376 MALSU1Q96EH3 234 aa13.08□□□□□ -0.31
SCARF1-203ENST00000434376 SPIN2AQ99865 258 aa13.08□□□□□ -0.31
SCARF1-203ENST00000434376 SPIN2BQ9BPZ2 258 aa13.08□□□□□ -0.31
SCARF1-203ENST00000434376 PSENENQ9NZ42 101 aa13.08□□□□□ -0.31
SCARF1-203ENST00000434376 LAMP3Q9UQV4 416 aa13.08□□□□□ -0.31
SCARF1-203ENST00000434376 ARHGAP32A7KAX9 2087 aa13.08□□□□□ -0.32
SCARF1-203ENST00000434376 EGR1P18146 543 aa13.08□□□□□ -0.32
SCARF1-203ENST00000434376 GALMQ96C23 342 aa13.08□□□□□ -0.32
SCARF1-203ENST00000434376 ACACBO00763 2458 aa13.08□□□□□ -0.32
SCARF1-203ENST00000434376 ACSF3Q4G176 576 aaPredicted RBP13.08□□□□□ -0.32
SCARF1-203ENST00000434376 Q6P435 159 aa13.08□□□□□ -0.32
SCARF1-203ENST00000434376 SPSB3Q6PJ21 355 aa13.08□□□□□ -0.32
SCARF1-203ENST00000434376 TECTBQ96PL2 329 aa13.08□□□□□ -0.32
SCARF1-203ENST00000434376 DCHS2Q6V1P9 2916 aa13.07□□□□□ -0.32
SCARF1-203ENST00000434376 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.07□□□□□ -0.32
SCARF1-203ENST00000434376 PKIAP61925 76 aa13.07□□□□□ -0.32
SCARF1-203ENST00000434376 ZNF124Q15973 351 aa13.07□□□□□ -0.32
SCARF1-203ENST00000434376 PRR30Q53SZ7 412 aaPredicted RBP13.07□□□□□ -0.32
SCARF1-203ENST00000434376 ZNF324BQ6AW86 544 aaPredicted RBP13.07□□□□□ -0.32
SCARF1-203ENST00000434376 REC114Q7Z4M0 266 aa13.07□□□□□ -0.32
SCARF1-203ENST00000434376 WDR31Q8NA23 367 aa13.07□□□□□ -0.32
SCARF1-203ENST00000434376 OR2V2Q96R30 315 aa13.07□□□□□ -0.32
SCARF1-203ENST00000434376 C17orf98A8MV24 154 aa13.07□□□□□ -0.32
SCARF1-203ENST00000434376 SLC31A2O15432 143 aa13.07□□□□□ -0.32
SCARF1-203ENST00000434376 S1PR2O95136 353 aa13.07□□□□□ -0.32
SCARF1-203ENST00000434376 CDS2O95674 445 aa13.07□□□□□ -0.32
SCARF1-203ENST00000434376 IFNA5P01569 189 aa13.07□□□□□ -0.32
SCARF1-203ENST00000434376 IGKV1-39P01597 117 aa13.07□□□□□ -0.32
SCARF1-203ENST00000434376 IGKV1D-39P04432 117 aa13.07□□□□□ -0.32
SCARF1-203ENST00000434376 TLE4Q04727 773 aa13.07□□□□□ -0.32
SCARF1-203ENST00000434376 IL24Q13007 206 aa13.07□□□□□ -0.32
SCARF1-203ENST00000434376 BHLHA15Q7RTS1 189 aaPredicted RBP13.07□□□□□ -0.32
SCARF1-203ENST00000434376 PLEKHF2Q9H8W4 249 aa13.07□□□□□ -0.32
SCARF1-203ENST00000434376 KIAA1456Q9P272 454 aa13.07□□□□□ -0.32
SCARF1-203ENST00000434376 CLCF1Q9UBD9 225 aa13.07□□□□□ -0.32
SCARF1-203ENST00000434376 IGHV1-18A0A0C4DH31 117 aa13.06□□□□□ -0.32
SCARF1-203ENST00000434376 LRP5LA4QPB2 252 aa13.06□□□□□ -0.32
SCARF1-203ENST00000434376 TCAPO15273 167 aa13.06□□□□□ -0.32
SCARF1-203ENST00000434376 FCGR3BO75015 233 aa13.06□□□□□ -0.32
SCARF1-203ENST00000434376 CA11O75493 328 aa13.06□□□□□ -0.32
SCARF1-203ENST00000434376 CYB5R3P00387 301 aaPredicted RBP13.06□□□□□ -0.32
SCARF1-203ENST00000434376 ARL16Q0P5N6 197 aa13.06□□□□□ -0.32
SCARF1-203ENST00000434376 OR4D5Q8NGN0 318 aa13.06□□□□□ -0.32
SCARF1-203ENST00000434376 SCGB1C1Q8TD33 95 aa13.06□□□□□ -0.32
SCARF1-203ENST00000434376 STARD4Q96DR4 205 aa13.06□□□□□ -0.32
SCARF1-203ENST00000434376 SLC25A31Q9H0C2 315 aa13.06□□□□□ -0.32
SCARF1-203ENST00000434376 AURKAIP1Q9NWT8 199 aaPredicted RBP13.06□□□□□ -0.32
SCARF1-203ENST00000434376 A0A1W2PPQ1 181 aa13.06□□□□□ -0.32
SCARF1-203ENST00000434376 CRYAAP02489 173 aa13.06□□□□□ -0.32
SCARF1-203ENST00000434376 ZNF787Q6DD87 383 aa13.06□□□□□ -0.32
SCARF1-203ENST00000434376 IGHV2OR16-5A0A0B4J2B6 119 aa13.06□□□□□ -0.32
SCARF1-203ENST00000434376 RPL39P5Q59GN2 51 aa13.06□□□□□ -0.32
SCARF1-203ENST00000434376 Q6ZSR3 168 aa13.06□□□□□ -0.32
SCARF1-203ENST00000434376 MRPL41Q8IXM3 137 aaKnown RBP13.06□□□□□ -0.32
SCARF1-203ENST00000434376 ITLN1Q8WWA0 313 aa13.06□□□□□ -0.32
SCARF1-203ENST00000434376 HIST1H2BLQ99880 126 aa13.06□□□□□ -0.32
SCARF1-203ENST00000434376 MYO18BQ8IUG5 2567 aa13.06□□□□□ -0.32
SCARF1-203ENST00000434376 IGKV1-5P01602 117 aa13.05□□□□□ -0.32
SCARF1-203ENST00000434376 COX5BP10606 129 aa13.05□□□□□ -0.32
SCARF1-203ENST00000434376 DLX1P56177 255 aa13.05□□□□□ -0.32
SCARF1-203ENST00000434376 WDR82Q6UXN9 313 aa13.05□□□□□ -0.32
SCARF1-203ENST00000434376 C1QL4Q86Z23 238 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms