RNA–Protein interactions for RNA: ENST00000433165.6

CNKSR3-202, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best)

Gene CNKSR3, Length 2,347 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-202ENST00000433165 MSMO1Q15800 293 aa6.51□□□□□ -1.37
CNKSR3-202ENST00000433165 TMEM211Q6ICI0 200 aa6.51□□□□□ -1.37
CNKSR3-202ENST00000433165 RPP25LQ8N5L8 163 aaKnown RBP6.51□□□□□ -1.37
CNKSR3-202ENST00000433165 ZNF738Q8NE65 137 aa6.51□□□□□ -1.37
CNKSR3-202ENST00000433165 TMEM234Q8WY98 164 aa6.51□□□□□ -1.37
CNKSR3-202ENST00000433165 SPSB1Q96BD6 273 aa6.51□□□□□ -1.37
CNKSR3-202ENST00000433165 WDR61Q9GZS3 305 aaKnown RBP6.51□□□□□ -1.37
CNKSR3-202ENST00000433165 PPIAL4AQ9Y536 164 aa6.51□□□□□ -1.37
CNKSR3-202ENST00000433165 TIMM9Q9Y5J7 89 aa6.51□□□□□ -1.37
CNKSR3-202ENST00000433165 ATRXP46100 2492 aa6.51□□□□□ -1.37
CNKSR3-202ENST00000433165 SEC16AO15027 2179 aa6.51□□□□□ -1.37
CNKSR3-202ENST00000433165 H3BP45 60 aa6.51□□□□□ -1.37
CNKSR3-202ENST00000433165 SLC33A1O00400 549 aaPredicted RBP6.51□□□□□ -1.37
CNKSR3-202ENST00000433165 SERF1AO75920 110 aa6.51□□□□□ -1.37
CNKSR3-202ENST00000433165 NEURL1O76050 574 aa6.51□□□□□ -1.37
CNKSR3-202ENST00000433165 NXPH3O95157 252 aa6.51□□□□□ -1.37
CNKSR3-202ENST00000433165 IGKV1D-33P01593 117 aa6.51□□□□□ -1.37
CNKSR3-202ENST00000433165 IGKV1-33P01594 117 aa6.51□□□□□ -1.37
CNKSR3-202ENST00000433165 P04436 131 aa6.51□□□□□ -1.37
CNKSR3-202ENST00000433165 IGLC2P0DOY2 106 aa6.51□□□□□ -1.37
CNKSR3-202ENST00000433165 IGLC3P0DOY3 106 aa6.51□□□□□ -1.37
CNKSR3-202ENST00000433165 CLRN1P58418 232 aa6.51□□□□□ -1.37
CNKSR3-202ENST00000433165 ARL16Q0P5N6 197 aa6.51□□□□□ -1.37
CNKSR3-202ENST00000433165 PLCXD2Q0VAA5 305 aa6.51□□□□□ -1.37
CNKSR3-202ENST00000433165 ZNF818PQ6ZRF7 136 aa6.51□□□□□ -1.37
CNKSR3-202ENST00000433165 Q6ZS49 121 aa6.51□□□□□ -1.37
CNKSR3-202ENST00000433165 SVIPQ8NHG7 77 aa6.51□□□□□ -1.37
CNKSR3-202ENST00000433165 ST8SIA1Q92185 356 aa6.51□□□□□ -1.37
CNKSR3-202ENST00000433165 NEIL1Q96FI4 390 aaPredicted RBP6.51□□□□□ -1.37
CNKSR3-202ENST00000433165 FAM173AQ9BQD7 235 aa6.51□□□□□ -1.37
CNKSR3-202ENST00000433165 ZNF703Q9H7S9 590 aaPredicted RBP6.51□□□□□ -1.37
CNKSR3-202ENST00000433165 ALKBH4Q9NXW9 302 aa6.51□□□□□ -1.37
CNKSR3-202ENST00000433165 B4GALT7Q9UBV7 327 aa6.51□□□□□ -1.37
CNKSR3-202ENST00000433165 PIGLQ9Y2B2 252 aa6.51□□□□□ -1.37
CNKSR3-202ENST00000433165 MED13Q9UHV7 2174 aa6.51□□□□□ -1.37
CNKSR3-202ENST00000433165 IGHV2OR16-5A0A0B4J2B6 119 aa6.5□□□□□ -1.37
CNKSR3-202ENST00000433165 CTXND1A0A1B0GTU2 59 aa6.5□□□□□ -1.37
CNKSR3-202ENST00000433165 GRIFINA4D1Z8 144 aa6.5□□□□□ -1.37
CNKSR3-202ENST00000433165 LIPT2A6NK58 231 aa6.5□□□□□ -1.37
CNKSR3-202ENST00000433165 H0Y980 276 aa6.5□□□□□ -1.37
CNKSR3-202ENST00000433165 AQP7O14520 342 aa6.5□□□□□ -1.37
CNKSR3-202ENST00000433165 PRRG2O14669 202 aa6.5□□□□□ -1.37
CNKSR3-202ENST00000433165 ANGPTL7O43827 346 aa6.5□□□□□ -1.37
CNKSR3-202ENST00000433165 HYPMO75409 117 aa6.5□□□□□ -1.37
CNKSR3-202ENST00000433165 TRAPPC6AO75865 159 aa6.5□□□□□ -1.37
CNKSR3-202ENST00000433165 OR2J2O76002 312 aa6.5□□□□□ -1.37
CNKSR3-202ENST00000433165 CNOT4O95628 575 aaKnown RBP6.5□□□□□ -1.37
CNKSR3-202ENST00000433165 IGHG1P01857 330 aa6.5□□□□□ -1.37
CNKSR3-202ENST00000433165 CA7P43166 264 aa6.5□□□□□ -1.37
CNKSR3-202ENST00000433165 MEOX1P50221 254 aa6.5□□□□□ -1.37
CNKSR3-202ENST00000433165 RPS20P60866 119 aaKnown RBP6.5□□□□□ -1.37
CNKSR3-202ENST00000433165 PLGLB1Q02325 96 aa6.5□□□□□ -1.37
CNKSR3-202ENST00000433165 Q0VG73 95 aa6.5□□□□□ -1.37
CNKSR3-202ENST00000433165 SPATA45Q537H7 98 aa6.5□□□□□ -1.37
CNKSR3-202ENST00000433165 HAPLN4Q86UW8 402 aa6.5□□□□□ -1.37
CNKSR3-202ENST00000433165 OR4F5Q8NH21 305 aa6.5□□□□□ -1.37
CNKSR3-202ENST00000433165 PSMG3-AS1Q96PY0 264 aa6.5□□□□□ -1.37
CNKSR3-202ENST00000433165 OR4F4Q96R69 305 aa6.5□□□□□ -1.37
CNKSR3-202ENST00000433165 SLC7A10Q9NS82 523 aa6.5□□□□□ -1.37
CNKSR3-202ENST00000433165 HSPB7Q9UBY9 170 aa6.5□□□□□ -1.37
CNKSR3-202ENST00000433165 BOKQ9UMX3 212 aaPredicted RBP6.5□□□□□ -1.37
CNKSR3-202ENST00000433165 NBEAQ8NFP9 2946 aa6.5□□□□□ -1.37
CNKSR3-202ENST00000433165 ZNF462Q96JM2 2506 aa6.5□□□□□ -1.37
CNKSR3-202ENST00000433165 ZFHX4Q86UP3 3567 aa6.5□□□□□ -1.37
CNKSR3-202ENST00000433165 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.5□□□□□ -1.37
CNKSR3-202ENST00000433165 PIGBOS1A0A0B4J2F0 54 aa6.5□□□□□ -1.37
CNKSR3-202ENST00000433165 A0A0G2JRQ6 117 aa6.5□□□□□ -1.37
CNKSR3-202ENST00000433165 PDCD6O75340 191 aa6.5□□□□□ -1.37
CNKSR3-202ENST00000433165 TMEM11P17152 192 aa6.5□□□□□ -1.37
CNKSR3-202ENST00000433165 OTX1P32242 354 aaPredicted RBP6.5□□□□□ -1.37
CNKSR3-202ENST00000433165 HNRNPA3P51991 378 aaKnown RBP6.5□□□□□ -1.37
CNKSR3-202ENST00000433165 HBG1P69891 147 aa6.5□□□□□ -1.37
CNKSR3-202ENST00000433165 HBG2P69892 147 aa6.5□□□□□ -1.37
CNKSR3-202ENST00000433165 HIST3H3Q16695 136 aa6.5□□□□□ -1.37
CNKSR3-202ENST00000433165 SPINK14Q6IE38 97 aa6.5□□□□□ -1.37
CNKSR3-202ENST00000433165 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.5□□□□□ -1.37
CNKSR3-202ENST00000433165 C20orf196Q8IYI0 205 aa6.5□□□□□ -1.37
CNKSR3-202ENST00000433165 GAPTQ8N292 157 aa6.5□□□□□ -1.37
CNKSR3-202ENST00000433165 ZNF808Q8N4W9 903 aaPredicted RBP6.5□□□□□ -1.37
CNKSR3-202ENST00000433165 ZNF709Q8N972 641 aa6.5□□□□□ -1.37
CNKSR3-202ENST00000433165 OR5P3Q8WZ94 311 aa6.5□□□□□ -1.37
CNKSR3-202ENST00000433165 TAF15Q92804 592 aaKnown RBP eCLIP6.5□□□□□ -1.37
CNKSR3-202ENST00000433165 TAAR6Q96RI8 345 aa6.5□□□□□ -1.37
CNKSR3-202ENST00000433165 CHODLQ9H9P2 273 aa6.5□□□□□ -1.37
CNKSR3-202ENST00000433165 PATZ1Q9HBE1 687 aaKnown RBP6.5□□□□□ -1.37
CNKSR3-202ENST00000433165 FBXL7Q9UJT9 491 aa6.5□□□□□ -1.37
CNKSR3-202ENST00000433165 DOCK10Q96BY6 2186 aa6.49□□□□□ -1.37
CNKSR3-202ENST00000433165 IGKV1-27A0A075B6S5 117 aa6.49□□□□□ -1.37
CNKSR3-202ENST00000433165 TRAV9-1A0A075B6T8 112 aa6.49□□□□□ -1.37
CNKSR3-202ENST00000433165 TRGV8A0A0C4DH27 118 aa6.49□□□□□ -1.37
CNKSR3-202ENST00000433165 TNFSF12O43508 249 aa6.49□□□□□ -1.37
CNKSR3-202ENST00000433165 SPRY1O43609 319 aaPredicted RBP6.49□□□□□ -1.37
CNKSR3-202ENST00000433165 TRAF3IP2O43734 574 aaPredicted RBP6.49□□□□□ -1.37
CNKSR3-202ENST00000433165 TUSC2O75896 110 aa6.49□□□□□ -1.37
CNKSR3-202ENST00000433165 NRASP01111 189 aa6.49□□□□□ -1.37
CNKSR3-202ENST00000433165 KRASP01116 189 aa6.49□□□□□ -1.37
CNKSR3-202ENST00000433165 CRISP2P16562 243 aa6.49□□□□□ -1.37
CNKSR3-202ENST00000433165 BMP5P22003 454 aa6.49□□□□□ -1.37
CNKSR3-202ENST00000433165 NPPCP23582 126 aa6.49□□□□□ -1.37
CNKSR3-202ENST00000433165 SUMO1P63165 101 aaKnown RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms