RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 NIPSNAP3BQ9BS92 247 aa9.63□□□□□ -0.87
CLDN4-202ENST00000431918 CLCF1Q9UBD9 225 aa9.63□□□□□ -0.87
CLDN4-202ENST00000431918 ZDHHC8Q9ULC8 765 aa9.63□□□□□ -0.87
CLDN4-202ENST00000431918 TP53TG5Q9Y2B4 290 aa9.63□□□□□ -0.87
CLDN4-202ENST00000431918 A0A1B0GU03 582 aa9.63□□□□□ -0.87
CLDN4-202ENST00000431918 MARCH11A6NNE9 402 aa9.63□□□□□ -0.87
CLDN4-202ENST00000431918 RPS23P62266 143 aaKnown RBP9.63□□□□□ -0.87
CLDN4-202ENST00000431918 TNFRSF9Q07011 255 aa9.63□□□□□ -0.87
CLDN4-202ENST00000431918 ATP5SQ99766 215 aa9.63□□□□□ -0.87
CLDN4-202ENST00000431918 GPR61Q9BZJ8 451 aa9.63□□□□□ -0.87
CLDN4-202ENST00000431918 ASCL3Q9NQ33 180 aa9.63□□□□□ -0.87
CLDN4-202ENST00000431918 LYRM2Q9NU23 88 aaPredicted RBP9.63□□□□□ -0.87
CLDN4-202ENST00000431918 SEC14L6B5MCN3 397 aa9.62□□□□□ -0.87
CLDN4-202ENST00000431918 FGF16O43320 207 aa9.62□□□□□ -0.87
CLDN4-202ENST00000431918 PTBP3O95758 552 aaKnown RBP9.62□□□□□ -0.87
CLDN4-202ENST00000431918 PDLIM3Q53GG5 364 aaPredicted RBP9.62□□□□□ -0.87
CLDN4-202ENST00000431918 S1PR3Q99500 378 aa9.62□□□□□ -0.87
CLDN4-202ENST00000431918 RARRES2Q99969 163 aa9.62□□□□□ -0.87
CLDN4-202ENST00000431918 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.62□□□□□ -0.87
CLDN4-202ENST00000431918 A0A1W2PPE2 198 aa9.62□□□□□ -0.87
CLDN4-202ENST00000431918 A0A1W2PPV4 95 aa9.62□□□□□ -0.87
CLDN4-202ENST00000431918 IQCF6A8MYZ5 107 aa9.62□□□□□ -0.87
CLDN4-202ENST00000431918 FGF7P21781 194 aa9.62□□□□□ -0.87
CLDN4-202ENST00000431918 SULT1A1P50225 295 aa9.62□□□□□ -0.87
CLDN4-202ENST00000431918 HMGN3Q15651 99 aa9.62□□□□□ -0.87
CLDN4-202ENST00000431918 WDR86Q86TI4 376 aa9.62□□□□□ -0.87
CLDN4-202ENST00000431918 CCL17Q92583 94 aa9.62□□□□□ -0.87
CLDN4-202ENST00000431918 CBY3A6NI87 242 aa9.62□□□□□ -0.87
CLDN4-202ENST00000431918 FAM157CP0CG43 387 aa9.62□□□□□ -0.87
CLDN4-202ENST00000431918 FOLR2P14207 255 aa9.62□□□□□ -0.87
CLDN4-202ENST00000431918 C4orf17Q53FE4 359 aa9.62□□□□□ -0.87
CLDN4-202ENST00000431918 C1orf185Q5T7R7 199 aa9.62□□□□□ -0.87
CLDN4-202ENST00000431918 DMRTA1Q5VZB9 504 aa9.62□□□□□ -0.87
CLDN4-202ENST00000431918 CST9LP1Q5W188 147 aa9.62□□□□□ -0.87
CLDN4-202ENST00000431918 OR13A1Q8NGR1 328 aa9.62□□□□□ -0.87
CLDN4-202ENST00000431918 NEU1Q99519 415 aa9.62□□□□□ -0.87
CLDN4-202ENST00000431918 SLC35B3Q9H1N7 401 aa9.62□□□□□ -0.87
CLDN4-202ENST00000431918 SLC25A22Q9H936 323 aa9.62□□□□□ -0.87
CLDN4-202ENST00000431918 METRNQ9UJH8 293 aa9.62□□□□□ -0.87
CLDN4-202ENST00000431918 WSB1Q9Y6I7 421 aa9.62□□□□□ -0.87
CLDN4-202ENST00000431918 YLPM1P49750 1951 aaKnown RBP9.61□□□□□ -0.87
CLDN4-202ENST00000431918 PITX3O75364 302 aa9.61□□□□□ -0.87
CLDN4-202ENST00000431918 ZNF324BQ6AW86 544 aaPredicted RBP9.61□□□□□ -0.87
CLDN4-202ENST00000431918 ZNF705AQ6ZN79 300 aaPredicted RBP9.61□□□□□ -0.87
CLDN4-202ENST00000431918 DOK5Q9P104 306 aa9.61□□□□□ -0.87
CLDN4-202ENST00000431918 TMPRSS2O15393 492 aa9.61□□□□□ -0.87
CLDN4-202ENST00000431918 MLNRO43193 412 aa9.61□□□□□ -0.87
CLDN4-202ENST00000431918 S1PR2O95136 353 aa9.61□□□□□ -0.87
CLDN4-202ENST00000431918 DANCRP0C864 163 aa9.61□□□□□ -0.87
CLDN4-202ENST00000431918 LINC00205P59089 165 aa9.61□□□□□ -0.87
CLDN4-202ENST00000431918 ACP7Q6ZNF0 438 aa9.61□□□□□ -0.87
CLDN4-202ENST00000431918 TMEM56Q96MV1 263 aa9.61□□□□□ -0.87
CLDN4-202ENST00000431918 TMEM56-RWDD3S4R434 201 aa9.61□□□□□ -0.87
CLDN4-202ENST00000431918 IGHV1-18A0A0C4DH31 117 aa9.61□□□□□ -0.87
CLDN4-202ENST00000431918 A0A0G2JRQ6 117 aa9.61□□□□□ -0.87
CLDN4-202ENST00000431918 RBFOX3A6NFN3 312 aa9.61□□□□□ -0.87
CLDN4-202ENST00000431918 M0R143 59 aa9.61□□□□□ -0.87
CLDN4-202ENST00000431918 AGAP20933 346 aa9.61□□□□□ -0.87
CLDN4-202ENST00000431918 CLEC12BQ2HXU8 276 aa9.61□□□□□ -0.87
CLDN4-202ENST00000431918 UNQ6494/PRO21346Q6UXR6 183 aa9.61□□□□□ -0.87
CLDN4-202ENST00000431918 Q6ZSR3 168 aa9.61□□□□□ -0.87
CLDN4-202ENST00000431918 OR4D5Q8NGN0 318 aa9.61□□□□□ -0.87
CLDN4-202ENST00000431918 RPUSD4Q96CM3 377 aaKnown RBP9.61□□□□□ -0.87
CLDN4-202ENST00000431918 SMIM8Q96KF7 97 aa9.61□□□□□ -0.87
CLDN4-202ENST00000431918 SAPCD1Q5SSQ6 148 aa9.6□□□□□ -0.87
CLDN4-202ENST00000431918 WDR82Q6UXN9 313 aa9.6□□□□□ -0.87
CLDN4-202ENST00000431918 ZCCHC24Q8N2G6 241 aaKnown RBP9.6□□□□□ -0.87
CLDN4-202ENST00000431918 STARD4Q96DR4 205 aa9.6□□□□□ -0.87
CLDN4-202ENST00000431918 HIPK2Q9H2X6 1198 aa9.6□□□□□ -0.87
CLDN4-202ENST00000431918 PTPRQQ9UMZ3 2332 aa9.6□□□□□ -0.87
CLDN4-202ENST00000431918 TRGV10A0A0A0MS01 117 aa9.6□□□□□ -0.87
CLDN4-202ENST00000431918 TCF21O43680 179 aa9.6□□□□□ -0.87
CLDN4-202ENST00000431918 KRTAP27-1Q3LI81 207 aa9.6□□□□□ -0.87
CLDN4-202ENST00000431918 Q6P435 159 aa9.6□□□□□ -0.87
CLDN4-202ENST00000431918 VKORC1L1Q8N0U8 176 aa9.6□□□□□ -0.87
CLDN4-202ENST00000431918 LRTM2Q8N967 370 aa9.6□□□□□ -0.87
CLDN4-202ENST00000431918 CCL13Q99616 98 aa9.6□□□□□ -0.87
CLDN4-202ENST00000431918 BARX1Q9HBU1 254 aaPredicted RBP9.6□□□□□ -0.87
CLDN4-202ENST00000431918 DUXBA0A1W2PPF3 345 aa9.6□□□□□ -0.87
CLDN4-202ENST00000431918 RAMP3O60896 148 aa9.6□□□□□ -0.87
CLDN4-202ENST00000431918 CLDN14O95500 239 aa9.6□□□□□ -0.87
CLDN4-202ENST00000431918 CYB5R3P00387 301 aaPredicted RBP9.6□□□□□ -0.87
CLDN4-202ENST00000431918 TMEM108Q6UXF1 575 aa9.6□□□□□ -0.87
CLDN4-202ENST00000431918 ZNF497Q6ZNH5 498 aa9.6□□□□□ -0.87
CLDN4-202ENST00000431918 R3HDM4Q96D70 268 aa9.6□□□□□ -0.87
CLDN4-202ENST00000431918 HOXA5P20719 270 aa9.59□□□□□ -0.87
CLDN4-202ENST00000431918 RND3P61587 244 aa9.59□□□□□ -0.87
CLDN4-202ENST00000431918 RBPJQ06330 500 aa9.59□□□□□ -0.87
CLDN4-202ENST00000431918 ADIRFQ15847 76 aa9.59□□□□□ -0.87
CLDN4-202ENST00000431918 PCSK4Q6UW60 755 aa9.59□□□□□ -0.87
CLDN4-202ENST00000431918 Q6ZPA2 131 aa9.59□□□□□ -0.87
CLDN4-202ENST00000431918 A0A0U1RQK1 487 aa9.59□□□□□ -0.87
CLDN4-202ENST00000431918 ODAMA1E959 279 aa9.59□□□□□ -0.87
CLDN4-202ENST00000431918 LRRC30A6NM36 301 aa9.59□□□□□ -0.87
CLDN4-202ENST00000431918 C17orf98A8MV24 154 aa9.59□□□□□ -0.87
CLDN4-202ENST00000431918 CEACAM1P13688 526 aa9.59□□□□□ -0.87
CLDN4-202ENST00000431918 SNCAP37840 140 aa9.59□□□□□ -0.87
CLDN4-202ENST00000431918 WDR31Q8NA23 367 aa9.59□□□□□ -0.87
CLDN4-202ENST00000431918 ABHD17AQ96GS6 310 aa9.59□□□□□ -0.87
CLDN4-202ENST00000431918 PACRGQ96M98 296 aaPredicted RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms