RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 MBNL2Q5VZF2 373 aaKnown RBP10.97□□□□□ -0.65
PTCH1-207ENST00000429896 C11orf87Q6NUJ2 197 aa10.97□□□□□ -0.65
PTCH1-207ENST00000429896 ACP7Q6ZNF0 438 aa10.97□□□□□ -0.65
PTCH1-207ENST00000429896 OR10A7Q8NGE5 316 aa10.97□□□□□ -0.65
PTCH1-207ENST00000429896 MUC6Q6W4X9 2439 aa10.97□□□□□ -0.65
PTCH1-207ENST00000429896 PPP1CCP36873 323 aaKnown RBP10.97□□□□□ -0.65
PTCH1-207ENST00000429896 ZNF154Q13106 437 aa10.97□□□□□ -0.65
PTCH1-207ENST00000429896 RAB32Q13637 225 aa10.97□□□□□ -0.65
PTCH1-207ENST00000429896 RPEL1Q2QD12 228 aa10.97□□□□□ -0.65
PTCH1-207ENST00000429896 CHRDL1Q9BU40 450 aa10.97□□□□□ -0.65
PTCH1-207ENST00000429896 ADAMTS9Q9P2N4 1935 aa10.96□□□□□ -0.65
PTCH1-207ENST00000429896 PLXNB3Q9ULL4 1909 aa10.96□□□□□ -0.65
PTCH1-207ENST00000429896 ODAMA1E959 279 aa10.96□□□□□ -0.65
PTCH1-207ENST00000429896 FCN1O00602 326 aa10.96□□□□□ -0.65
PTCH1-207ENST00000429896 HBZP02008 142 aa10.96□□□□□ -0.65
PTCH1-207ENST00000429896 C5orf17Q8NAS9 161 aa10.96□□□□□ -0.65
PTCH1-207ENST00000429896 YAE1D1Q9NRH1 226 aa10.96□□□□□ -0.65
PTCH1-207ENST00000429896 CRYGSP22914 178 aa10.96□□□□□ -0.65
PTCH1-207ENST00000429896 PMS2P11Q13670 270 aa10.96□□□□□ -0.65
PTCH1-207ENST00000429896 POM121Q96HA1 1249 aa10.96□□□□□ -0.65
PTCH1-207ENST00000429896 C12orf57Q99622 126 aa10.96□□□□□ -0.65
PTCH1-207ENST00000429896 OR2W1Q9Y3N9 320 aa10.96□□□□□ -0.65
PTCH1-207ENST00000429896 HILPDAQ9Y5L2 63 aa10.96□□□□□ -0.65
PTCH1-207ENST00000429896 WNT9BO14905 357 aa10.96□□□□□ -0.66
PTCH1-207ENST00000429896 UNQ9370/PRO34162Q6UXP9 181 aa10.96□□□□□ -0.66
PTCH1-207ENST00000429896 POC1AQ8NBT0 407 aa10.96□□□□□ -0.66
PTCH1-207ENST00000429896 SOSTQ9BQB4 213 aa10.96□□□□□ -0.66
PTCH1-207ENST00000429896 HDHD3Q9BSH5 251 aaPredicted RBP10.96□□□□□ -0.66
PTCH1-207ENST00000429896 IGHV3OR16-10A0A075B7F0 116 aa10.96□□□□□ -0.66
PTCH1-207ENST00000429896 ANKRD20A5PA0PJZ0 165 aa10.96□□□□□ -0.66
PTCH1-207ENST00000429896 SULT1A2P50226 295 aa10.96□□□□□ -0.66
PTCH1-207ENST00000429896 GUK1Q16774 197 aa10.96□□□□□ -0.66
PTCH1-207ENST00000429896 ZNF672Q499Z4 452 aaPredicted RBP10.96□□□□□ -0.66
PTCH1-207ENST00000429896 TBC1D26Q86UD7 250 aa10.96□□□□□ -0.66
PTCH1-207ENST00000429896 CALYQ9NYX4 217 aa10.96□□□□□ -0.66
PTCH1-207ENST00000429896 C5orf52A6NGY3 159 aa10.95□□□□□ -0.66
PTCH1-207ENST00000429896 GAPDHP04406 335 aaKnown RBP10.95□□□□□ -0.66
PTCH1-207ENST00000429896 PRSS1P07477 247 aa10.95□□□□□ -0.66
PTCH1-207ENST00000429896 ZNF137PP52743 207 aa10.95□□□□□ -0.66
PTCH1-207ENST00000429896 EFNA4P52798 201 aa10.95□□□□□ -0.66
PTCH1-207ENST00000429896 ZNF362Q5T0B9 420 aaPredicted RBP10.95□□□□□ -0.66
PTCH1-207ENST00000429896 GRAMD2BQ96HH9 432 aa10.95□□□□□ -0.66
PTCH1-207ENST00000429896 LPAR5Q9H1C0 372 aa10.95□□□□□ -0.66
PTCH1-207ENST00000429896 TEX50A0A1B0GTY4 177 aa10.95□□□□□ -0.66
PTCH1-207ENST00000429896 A0A1W2PP11 408 aa10.95□□□□□ -0.66
PTCH1-207ENST00000429896 FCGR3AP08637 254 aa10.95□□□□□ -0.66
PTCH1-207ENST00000429896 TMEM116Q8NCL8 245 aa10.95□□□□□ -0.66
PTCH1-207ENST00000429896 OR10G4Q8NGN3 311 aa10.95□□□□□ -0.66
PTCH1-207ENST00000429896 OR10G9Q8NGN4 311 aa10.95□□□□□ -0.66
PTCH1-207ENST00000429896 OR10G7Q8NGN6 311 aa10.95□□□□□ -0.66
PTCH1-207ENST00000429896 FAM215AQ9Y5M1 114 aa10.95□□□□□ -0.66
PTCH1-207ENST00000429896 SPTA1P02549 2419 aa10.95□□□□□ -0.66
PTCH1-207ENST00000429896 IGHV3-72A0A0B4J1Y9 119 aa10.95□□□□□ -0.66
PTCH1-207ENST00000429896 POLR2GP62487 172 aaKnown RBP eCLIP10.95□□□□□ -0.66
PTCH1-207ENST00000429896 SIRT7Q9NRC8 400 aa10.95□□□□□ -0.66
PTCH1-207ENST00000429896 VSIG4Q9Y279 399 aa10.95□□□□□ -0.66
PTCH1-207ENST00000429896 HEATR5BQ9P2D3 2071 aa10.95□□□□□ -0.66
PTCH1-207ENST00000429896 NPBWR2P48146 333 aa10.95□□□□□ -0.66
PTCH1-207ENST00000429896 FAM90A1Q86YD7 464 aa10.95□□□□□ -0.66
PTCH1-207ENST00000429896 FAM169BQ8N8A8 192 aa10.95□□□□□ -0.66
PTCH1-207ENST00000429896 OR10D4PQ8NGN7 298 aa10.95□□□□□ -0.66
PTCH1-207ENST00000429896 SPTBN2O15020 2390 aa10.95□□□□□ -0.66
PTCH1-207ENST00000429896 LEUTXA8MZ59 168 aa10.95□□□□□ -0.66
PTCH1-207ENST00000429896 RAB29O14966 203 aa10.95□□□□□ -0.66
PTCH1-207ENST00000429896 TMEM33P57088 247 aa10.95□□□□□ -0.66
PTCH1-207ENST00000429896 GGNBP1Q5YKI7 109 aa10.95□□□□□ -0.66
PTCH1-207ENST00000429896 ZBTB34Q8NCN2 500 aa10.95□□□□□ -0.66
PTCH1-207ENST00000429896 NAA60Q9H7X0 242 aa10.95□□□□□ -0.66
PTCH1-207ENST00000429896 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.95□□□□□ -0.66
PTCH1-207ENST00000429896 ZNF729A6NN14 1252 aaPredicted RBP10.94□□□□□ -0.66
PTCH1-207ENST00000429896 PIN1P1O15428 100 aa10.94□□□□□ -0.66
PTCH1-207ENST00000429896 GNG7O60262 68 aa10.94□□□□□ -0.66
PTCH1-207ENST00000429896 TNFSF13O75888 250 aa10.94□□□□□ -0.66
PTCH1-207ENST00000429896 DKK1O94907 266 aa10.94□□□□□ -0.66
PTCH1-207ENST00000429896 FAM106CPP0CH98 169 aa10.94□□□□□ -0.66
PTCH1-207ENST00000429896 FAM201AQ5SY85 155 aa10.94□□□□□ -0.66
PTCH1-207ENST00000429896 HOGA1Q86XE5 327 aa10.94□□□□□ -0.66
PTCH1-207ENST00000429896 OR4C46A6NHA9 309 aa10.94□□□□□ -0.66
PTCH1-207ENST00000429896 GUCA2BQ16661 112 aa10.94□□□□□ -0.66
PTCH1-207ENST00000429896 CD200R1LQ6Q8B3 271 aa10.94□□□□□ -0.66
PTCH1-207ENST00000429896 OR5R1Q8NH85 324 aa10.94□□□□□ -0.66
PTCH1-207ENST00000429896 P2RX4Q99571 388 aa10.94□□□□□ -0.66
PTCH1-207ENST00000429896 C9orf170A2RU37 121 aa10.94□□□□□ -0.66
PTCH1-207ENST00000429896 CLLU1Q5K131 121 aa10.94□□□□□ -0.66
PTCH1-207ENST00000429896 TGFAP01135 160 aa10.94□□□□□ -0.66
PTCH1-207ENST00000429896 PPYP01298 95 aa10.94□□□□□ -0.66
PTCH1-207ENST00000429896 OR4P4Q8NGL7 312 aa10.94□□□□□ -0.66
PTCH1-207ENST00000429896 ANGPTL6Q8NI99 470 aa10.94□□□□□ -0.66
PTCH1-207ENST00000429896 PPP1R3EQ9H7J1 279 aa10.94□□□□□ -0.66
PTCH1-207ENST00000429896 MAP1LC3B2A6NCE7 125 aa10.94□□□□□ -0.66
PTCH1-207ENST00000429896 IGHV1-46P01743 117 aa10.94□□□□□ -0.66
PTCH1-207ENST00000429896 UBE2L3P68036 154 aaKnown RBP10.94□□□□□ -0.66
PTCH1-207ENST00000429896 HIST3H3Q16695 136 aa10.94□□□□□ -0.66
PTCH1-207ENST00000429896 FAM24BQ8N5W8 94 aa10.94□□□□□ -0.66
PTCH1-207ENST00000429896 RGP1Q92546 391 aaPredicted RBP10.94□□□□□ -0.66
PTCH1-207ENST00000429896 MAP1LC3BQ9GZQ8 125 aa10.94□□□□□ -0.66
PTCH1-207ENST00000429896 H7C2G1 150 aa10.93□□□□□ -0.66
PTCH1-207ENST00000429896 CTSDP07339 412 aaPredicted RBP10.93□□□□□ -0.66
PTCH1-207ENST00000429896 MOGAT2Q3SYC2 334 aa10.93□□□□□ -0.66
PTCH1-207ENST00000429896 PDPNQ86YL7 162 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms