RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 ZNF616Q08AN1 781 aa1.74□□□□□ -2.13
HMGB1P9-201ENST00000429856 ZNF816Q0VGE8 651 aaPredicted RBP1.74□□□□□ -2.13
HMGB1P9-201ENST00000429856 EBI3Q14213 229 aa1.74□□□□□ -2.13
HMGB1P9-201ENST00000429856 PDGFRLQ15198 375 aa1.74□□□□□ -2.13
HMGB1P9-201ENST00000429856 ARHGAP11BQ3KRB8 267 aa1.74□□□□□ -2.13
HMGB1P9-201ENST00000429856 PYCR3Q53H96 274 aa1.74□□□□□ -2.13
HMGB1P9-201ENST00000429856 LPCAT3Q6P1A2 487 aa1.74□□□□□ -2.13
HMGB1P9-201ENST00000429856 TMEM144Q7Z5S9 345 aa1.74□□□□□ -2.13
HMGB1P9-201ENST00000429856 H1FOOQ8IZA3 346 aaPredicted RBP1.74□□□□□ -2.13
HMGB1P9-201ENST00000429856 TMEM105Q8N8V8 129 aa1.74□□□□□ -2.13
HMGB1P9-201ENST00000429856 LY6G5BQ8NDX9 201 aa1.74□□□□□ -2.13
HMGB1P9-201ENST00000429856 OR8A1Q8NGG7 326 aa1.74□□□□□ -2.13
HMGB1P9-201ENST00000429856 OR2T27Q8NH04 317 aa1.74□□□□□ -2.13
HMGB1P9-201ENST00000429856 OR4A5Q8NH83 315 aa1.74□□□□□ -2.13
HMGB1P9-201ENST00000429856 KCTD4Q8WVF5 259 aa1.74□□□□□ -2.13
HMGB1P9-201ENST00000429856 RASSF5Q8WWW0 418 aa1.74□□□□□ -2.13
HMGB1P9-201ENST00000429856 KLK6Q92876 244 aa1.74□□□□□ -2.13
HMGB1P9-201ENST00000429856 CPNE2Q96FN4 548 aaPredicted RBP1.74□□□□□ -2.13
HMGB1P9-201ENST00000429856 ABHD14BQ96IU4 210 aa1.74□□□□□ -2.13
HMGB1P9-201ENST00000429856 ULBP3Q9BZM4 244 aa1.74□□□□□ -2.13
HMGB1P9-201ENST00000429856 ALX4Q9H161 411 aaPredicted RBP1.74□□□□□ -2.13
HMGB1P9-201ENST00000429856 RNASE7Q9H1E1 156 aaKnown RBP1.74□□□□□ -2.13
HMGB1P9-201ENST00000429856 BOLA2Q9H3K6 86 aa1.74□□□□□ -2.13
HMGB1P9-201ENST00000429856 FAM60AQ9NP50 221 aa1.74□□□□□ -2.13
HMGB1P9-201ENST00000429856 C14orf105Q9NVL8 296 aa1.74□□□□□ -2.13
HMGB1P9-201ENST00000429856 ZNF586Q9NXT0 402 aa1.74□□□□□ -2.13
HMGB1P9-201ENST00000429856 OPTCQ9UBM4 332 aa1.74□□□□□ -2.13
HMGB1P9-201ENST00000429856 SMPXQ9UHP9 88 aa1.74□□□□□ -2.13
HMGB1P9-201ENST00000429856 ENOPH1Q9UHY7 261 aa1.74□□□□□ -2.13
HMGB1P9-201ENST00000429856 TIMM22Q9Y584 194 aa1.74□□□□□ -2.13
HMGB1P9-201ENST00000429856 PIK3C2GO75747 1445 aa1.74□□□□□ -2.13
HMGB1P9-201ENST00000429856 NCOA1Q15788 1441 aa1.74□□□□□ -2.13
HMGB1P9-201ENST00000429856 MTUS2Q5JR59 1369 aa1.73□□□□□ -2.13
HMGB1P9-201ENST00000429856 DHX57Q6P158 1386 aaKnown RBP1.73□□□□□ -2.13
HMGB1P9-201ENST00000429856 SCN10AQ9Y5Y9 1956 aa1.73□□□□□ -2.13
HMGB1P9-201ENST00000429856 IGHV3-43A0A0B4J1X8 118 aa1.73□□□□□ -2.13
HMGB1P9-201ENST00000429856 IGKV1-12A0A0C4DH73 117 aa1.73□□□□□ -2.13
HMGB1P9-201ENST00000429856 A0A1B0GV72 72 aa1.73□□□□□ -2.13
HMGB1P9-201ENST00000429856 EXOC1LA0A1B0GW35 172 aa1.73□□□□□ -2.13
HMGB1P9-201ENST00000429856 COLCA2A8K830 154 aa1.73□□□□□ -2.13
HMGB1P9-201ENST00000429856 H3BSA7 217 aa1.73□□□□□ -2.13
HMGB1P9-201ENST00000429856 PDE6DO43924 150 aa1.73□□□□□ -2.13
HMGB1P9-201ENST00000429856 CDRT1O95170 752 aa1.73□□□□□ -2.13
HMGB1P9-201ENST00000429856 IFNA1P01562 189 aa1.73□□□□□ -2.13
HMGB1P9-201ENST00000429856 IGKV1D-12P01611 117 aa1.73□□□□□ -2.13
HMGB1P9-201ENST00000429856 IGLV3-27P01718 113 aa1.73□□□□□ -2.13
HMGB1P9-201ENST00000429856 IGHMP01871 453 aa1.73□□□□□ -2.13
HMGB1P9-201ENST00000429856 TRGV3P03979 118 aa1.73□□□□□ -2.13
HMGB1P9-201ENST00000429856 OPN1SWP03999 348 aa1.73□□□□□ -2.13
HMGB1P9-201ENST00000429856 PFN1P07737 140 aaKnown RBP1.73□□□□□ -2.13
HMGB1P9-201ENST00000429856 CISD3P0C7P0 127 aa1.73□□□□□ -2.13
HMGB1P9-201ENST00000429856 MUC1P15941 1255 aaPredicted RBP1.73□□□□□ -2.13
HMGB1P9-201ENST00000429856 IL1RNP18510 177 aa1.73□□□□□ -2.13
HMGB1P9-201ENST00000429856 CDK2P24941 298 aa1.73□□□□□ -2.13
HMGB1P9-201ENST00000429856 MSNP26038 577 aaKnown RBP1.73□□□□□ -2.13
HMGB1P9-201ENST00000429856 DEFA1P59665 94 aa1.73□□□□□ -2.13
HMGB1P9-201ENST00000429856 BTN1A1Q13410 526 aa1.73□□□□□ -2.13
HMGB1P9-201ENST00000429856 FAM104BQ5XKR9 115 aa1.73□□□□□ -2.13
HMGB1P9-201ENST00000429856 TBPL2Q6SJ96 375 aa1.73□□□□□ -2.13
HMGB1P9-201ENST00000429856 DAZ4Q86SG3 579 aaKnown RBP1.73□□□□□ -2.13
HMGB1P9-201ENST00000429856 C1orf174Q8IYL3 243 aa1.73□□□□□ -2.13
HMGB1P9-201ENST00000429856 OSR2Q8N2R0 312 aa1.73□□□□□ -2.13
HMGB1P9-201ENST00000429856 SMIM20Q8N5G0 67 aa1.73□□□□□ -2.13
HMGB1P9-201ENST00000429856 KRTCAP2Q8N6L1 136 aa1.73□□□□□ -2.13
HMGB1P9-201ENST00000429856 OR51A2Q8NGJ7 313 aa1.73□□□□□ -2.13
HMGB1P9-201ENST00000429856 MCFD2Q8NI22 146 aa1.73□□□□□ -2.13
HMGB1P9-201ENST00000429856 LHFPL5Q8TAF8 219 aa1.73□□□□□ -2.13
HMGB1P9-201ENST00000429856 BORCS7Q96B45 105 aa1.73□□□□□ -2.13
HMGB1P9-201ENST00000429856 IP6K3Q96PC2 410 aa1.73□□□□□ -2.13
HMGB1P9-201ENST00000429856 SHANK2-AS3Q9BTD1 123 aa1.73□□□□□ -2.13
HMGB1P9-201ENST00000429856 ABCG5Q9H222 651 aa1.73□□□□□ -2.13
HMGB1P9-201ENST00000429856 DAZ1Q9NQZ3 744 aaKnown RBP1.73□□□□□ -2.13
HMGB1P9-201ENST00000429856 CYTL1Q9NRR1 136 aa1.73□□□□□ -2.13
HMGB1P9-201ENST00000429856 C19orf12Q9NSK7 152 aa1.73□□□□□ -2.13
HMGB1P9-201ENST00000429856 DNAJC12Q9UKB3 198 aa1.73□□□□□ -2.13
HMGB1P9-201ENST00000429856 ANAPC10Q9UM13 185 aa1.73□□□□□ -2.13
HMGB1P9-201ENST00000429856 UTP11Q9Y3A2 253 aaKnown RBP1.73□□□□□ -2.13
HMGB1P9-201ENST00000429856 UFC1Q9Y3C8 167 aa1.73□□□□□ -2.13
HMGB1P9-201ENST00000429856 THSD7AQ9UPZ6 1657 aa1.73□□□□□ -2.13
HMGB1P9-201ENST00000429856 HECW2Q9P2P5 1572 aa1.72□□□□□ -2.13
HMGB1P9-201ENST00000429856 IGKV2D-24A0A075B6R9 120 aa1.72□□□□□ -2.13
HMGB1P9-201ENST00000429856 A0A1B0GV50 99 aa1.72□□□□□ -2.13
HMGB1P9-201ENST00000429856 OR5H14A6NHG9 310 aa1.72□□□□□ -2.13
HMGB1P9-201ENST00000429856 OR4C45A6NMZ5 311 aa1.72□□□□□ -2.13
HMGB1P9-201ENST00000429856 A8MUU9 505 aa1.72□□□□□ -2.13
HMGB1P9-201ENST00000429856 C16orf90A8MZG2 172 aa1.72□□□□□ -2.13
HMGB1P9-201ENST00000429856 IFNA21P01568 189 aa1.72□□□□□ -2.13
HMGB1P9-201ENST00000429856 IGHV1-46P01743 117 aa1.72□□□□□ -2.13
HMGB1P9-201ENST00000429856 HLA-DQB2P05538 268 aa1.72□□□□□ -2.13
HMGB1P9-201ENST00000429856 NPY1RP25929 384 aa1.72□□□□□ -2.13
HMGB1P9-201ENST00000429856 OR10J1P30954 320 aa1.72□□□□□ -2.13
HMGB1P9-201ENST00000429856 GABRA3P34903 492 aa1.72□□□□□ -2.13
HMGB1P9-201ENST00000429856 MPIP34949 423 aa1.72□□□□□ -2.13
HMGB1P9-201ENST00000429856 CA7P43166 264 aa1.72□□□□□ -2.13
HMGB1P9-201ENST00000429856 NUDT2P50583 147 aa1.72□□□□□ -2.13
HMGB1P9-201ENST00000429856 GNG3P63215 75 aa1.72□□□□□ -2.13
HMGB1P9-201ENST00000429856 BSPH1Q075Z2 132 aa1.72□□□□□ -2.13
HMGB1P9-201ENST00000429856 MOBPQ13875 183 aa1.72□□□□□ -2.13
HMGB1P9-201ENST00000429856 MMDQ15546 238 aa1.72□□□□□ -2.13
HMGB1P9-201ENST00000429856 KCNJ8Q15842 424 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms