RNA–Protein interactions for RNA: ENST00000428956.6

C4A-243, Transcript of complement C4A (Rodgers blood group), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C4A, Length 5,460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-243ENST00000428956 HOXA4Q00056 320 aaPredicted RBP13.53□□□□□ -0.24
C4A-243ENST00000428956 PCOLCEQ15113 449 aa13.53□□□□□ -0.24
C4A-243ENST00000428956 RBPMS2Q6ZRY4 209 aaKnown RBP13.53□□□□□ -0.24
C4A-243ENST00000428956 STARD6P59095 220 aa13.53□□□□□ -0.24
C4A-243ENST00000428956 RPL24P83731 157 aaKnown RBP13.53□□□□□ -0.24
C4A-243ENST00000428956 NRN1LQ496H8 165 aa13.53□□□□□ -0.24
C4A-243ENST00000428956 SAP25Q8TEE9 199 aa13.53□□□□□ -0.24
C4A-243ENST00000428956 MRPL32Q9BYC8 188 aaKnown RBP13.53□□□□□ -0.24
C4A-243ENST00000428956 K7ERU9 68 aa13.53□□□□□ -0.24
C4A-243ENST00000428956 C8orf88P0DMB2 117 aa13.53□□□□□ -0.24
C4A-243ENST00000428956 UNC119Q13432 240 aa13.53□□□□□ -0.24
C4A-243ENST00000428956 DCAF16Q9NXF7 216 aa13.53□□□□□ -0.24
C4A-243ENST00000428956 CALYQ9NYX4 217 aa13.53□□□□□ -0.24
C4A-243ENST00000428956 TNS1Q9HBL0 1735 aaKnown RBP13.53□□□□□ -0.24
C4A-243ENST00000428956 PATE3B3GLJ2 98 aa13.53□□□□□ -0.24
C4A-243ENST00000428956 CELA2AP08217 269 aa13.53□□□□□ -0.24
C4A-243ENST00000428956 ID1P41134 155 aa13.53□□□□□ -0.24
C4A-243ENST00000428956 RPS20P60866 119 aaKnown RBP13.53□□□□□ -0.24
C4A-243ENST00000428956 ZNF738Q8NE65 137 aa13.53□□□□□ -0.24
C4A-243ENST00000428956 FAM216AQ8WUB2 273 aa13.53□□□□□ -0.24
C4A-243ENST00000428956 TMEM189A5PLL7 270 aa13.53□□□□□ -0.24
C4A-243ENST00000428956 OR8A1Q8NGG7 326 aa13.53□□□□□ -0.24
C4A-243ENST00000428956 DPF1Q92782 380 aa13.53□□□□□ -0.24
C4A-243ENST00000428956 TMEM140Q9NV12 185 aa13.53□□□□□ -0.24
C4A-243ENST00000428956 ASPHD2Q6ICH7 369 aa13.52□□□□□ -0.24
C4A-243ENST00000428956 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.52□□□□□ -0.24
C4A-243ENST00000428956 C12orf54Q6X4T0 127 aa13.52□□□□□ -0.24
C4A-243ENST00000428956 PRNTQ86SH4 94 aa13.52□□□□□ -0.24
C4A-243ENST00000428956 TMEM208Q9BTX3 173 aa13.52□□□□□ -0.24
C4A-243ENST00000428956 QTRT1Q9BXR0 403 aaKnown RBP13.52□□□□□ -0.24
C4A-243ENST00000428956 PLSCR2Q9NRY7 297 aa13.52□□□□□ -0.24
C4A-243ENST00000428956 UQCR10Q9UDW1 63 aa13.52□□□□□ -0.24
C4A-243ENST00000428956 MARCH11A6NNE9 402 aa13.52□□□□□ -0.24
C4A-243ENST00000428956 TREM2Q9NZC2 230 aa13.52□□□□□ -0.24
C4A-243ENST00000428956 KIR2DL2P43627 348 aaPredicted RBP13.52□□□□□ -0.25
C4A-243ENST00000428956 PSMB2P49721 201 aa13.52□□□□□ -0.25
C4A-243ENST00000428956 RTP5Q14D33 572 aa13.52□□□□□ -0.25
C4A-243ENST00000428956 ZNF818PQ6ZRF7 136 aa13.52□□□□□ -0.25
C4A-243ENST00000428956 CCL13Q99616 98 aa13.52□□□□□ -0.25
C4A-243ENST00000428956 XIRP1Q702N8 1843 aaKnown RBP13.52□□□□□ -0.25
C4A-243ENST00000428956 STPG1Q5TH74 334 aa13.52□□□□□ -0.25
C4A-243ENST00000428956 SLC35E4Q6ICL7 350 aa13.52□□□□□ -0.25
C4A-243ENST00000428956 MRPL18Q9H0U6 180 aaKnown RBP13.52□□□□□ -0.25
C4A-243ENST00000428956 IL17BQ9UHF5 180 aa13.52□□□□□ -0.25
C4A-243ENST00000428956 TRAV30A0A087WSZ9 112 aa13.51□□□□□ -0.25
C4A-243ENST00000428956 TGIF2-C20orf24A0A0A6YYL0 155 aa13.51□□□□□ -0.25
C4A-243ENST00000428956 A0A1W2PR77 199 aa13.51□□□□□ -0.25
C4A-243ENST00000428956 DDTP30046 118 aa13.51□□□□□ -0.25
C4A-243ENST00000428956 SMAGPQ0VAQ4 97 aa13.51□□□□□ -0.25
C4A-243ENST00000428956 MIC13Q5XKP0 118 aa13.51□□□□□ -0.25
C4A-243ENST00000428956 ZNF385CQ66K41 422 aaPredicted RBP13.51□□□□□ -0.25
C4A-243ENST00000428956 DNAJC4Q9NNZ3 241 aa13.51□□□□□ -0.25
C4A-243ENST00000428956 TAF1LQ8IZX4 1826 aa13.51□□□□□ -0.25
C4A-243ENST00000428956 C5orf52A6NGY3 159 aa13.51□□□□□ -0.25
C4A-243ENST00000428956 RECKO95980 971 aa13.51□□□□□ -0.25
C4A-243ENST00000428956 AREGP15514 252 aa13.51□□□□□ -0.25
C4A-243ENST00000428956 SHISA5Q8N114 240 aa13.51□□□□□ -0.25
C4A-243ENST00000428956 RARRES2Q99969 163 aa13.51□□□□□ -0.25
C4A-243ENST00000428956 AP5S1Q9NUS5 200 aa13.51□□□□□ -0.25
C4A-243ENST00000428956 A0A1W2PPE3 182 aa13.51□□□□□ -0.25
C4A-243ENST00000428956 IZUMO4Q1ZYL8 232 aa13.51□□□□□ -0.25
C4A-243ENST00000428956 C2orf68Q2NKX9 166 aa13.51□□□□□ -0.25
C4A-243ENST00000428956 GGACTQ9BVM4 153 aa13.51□□□□□ -0.25
C4A-243ENST00000428956 ZNF729A6NN14 1252 aaPredicted RBP13.51□□□□□ -0.25
C4A-243ENST00000428956 DLX1P56177 255 aa13.51□□□□□ -0.25
C4A-243ENST00000428956 SRSF9Q13242 221 aaKnown RBP eCLIP13.51□□□□□ -0.25
C4A-243ENST00000428956 LAMTOR1Q6IAA8 161 aa13.51□□□□□ -0.25
C4A-243ENST00000428956 ZNF71Q9NQZ8 489 aaPredicted RBP13.51□□□□□ -0.25
C4A-243ENST00000428956 FBLN5Q9UBX5 448 aa13.51□□□□□ -0.25
C4A-243ENST00000428956 RHBDL1O75783 438 aa13.5□□□□□ -0.25
C4A-243ENST00000428956 ZNF137PP52743 207 aa13.5□□□□□ -0.25
C4A-243ENST00000428956 ZNF146Q15072 292 aa13.5□□□□□ -0.25
C4A-243ENST00000428956 TPRX1Q8N7U7 411 aa13.5□□□□□ -0.25
C4A-243ENST00000428956 SPSB2Q99619 263 aa13.5□□□□□ -0.25
C4A-243ENST00000428956 SOSTQ9BQB4 213 aa13.5□□□□□ -0.25
C4A-243ENST00000428956 IGKV3D-11A0A0A0MRZ8 115 aa13.5□□□□□ -0.25
C4A-243ENST00000428956 ITLN1Q8WWA0 313 aa13.5□□□□□ -0.25
C4A-243ENST00000428956 OR5P3Q8WZ94 311 aa13.5□□□□□ -0.25
C4A-243ENST00000428956 SRXN1Q9BYN0 137 aa13.5□□□□□ -0.25
C4A-243ENST00000428956 SH3BGRL3Q9H299 93 aa13.5□□□□□ -0.25
C4A-243ENST00000428956 GCSHP23434 173 aa13.5□□□□□ -0.25
C4A-243ENST00000428956 SPANXN1Q5VSR9 72 aa13.5□□□□□ -0.25
C4A-243ENST00000428956 OR4A5Q8NH83 315 aa13.5□□□□□ -0.25
C4A-243ENST00000428956 ASCC3Q8N3C0 2202 aaKnown RBP13.5□□□□□ -0.25
C4A-243ENST00000428956 EFNB1P98172 346 aa13.5□□□□□ -0.25
C4A-243ENST00000428956 PARLQ9H300 379 aa13.5□□□□□ -0.25
C4A-243ENST00000428956 A0A0B4J293 547 aa13.49□□□□□ -0.25
C4A-243ENST00000428956 LCN2P80188 198 aa13.49□□□□□ -0.25
C4A-243ENST00000428956 STPG3Q8N7X2 389 aa13.49□□□□□ -0.25
C4A-243ENST00000428956 PILRBQ9UKJ0 227 aa13.49□□□□□ -0.25
C4A-243ENST00000428956 TCF19Q9Y242 345 aa13.49□□□□□ -0.25
C4A-243ENST00000428956 WNK3Q9BYP7 1800 aa13.49□□□□□ -0.25
C4A-243ENST00000428956 A0A1W2PRD5 423 aa13.49□□□□□ -0.25
C4A-243ENST00000428956 A0A1W2PRF3 423 aa13.49□□□□□ -0.25
C4A-243ENST00000428956 A0A1W2PRM7 423 aa13.49□□□□□ -0.25
C4A-243ENST00000428956 CDK2AP1O14519 115 aa13.49□□□□□ -0.25
C4A-243ENST00000428956 EIF3GO75821 320 aaKnown RBP eCLIP13.49□□□□□ -0.25
C4A-243ENST00000428956 MDKP21741 143 aaPredicted RBP13.49□□□□□ -0.25
C4A-243ENST00000428956 CA7P43166 264 aa13.49□□□□□ -0.25
C4A-243ENST00000428956 FOXL2P58012 376 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms