RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 IAH1Q2TAA2 248 aaPredicted RBP7.11□□□□□ -1.27
HDAC1-202ENST00000428704 LRRC37A5PQ49AS3 106 aa7.11□□□□□ -1.27
HDAC1-202ENST00000428704 TMEM155Q4W5P6 130 aa7.11□□□□□ -1.27
HDAC1-202ENST00000428704 PAN3Q58A45 887 aaKnown RBP7.11□□□□□ -1.27
HDAC1-202ENST00000428704 C6orf183Q5T699 404 aa7.11□□□□□ -1.27
HDAC1-202ENST00000428704 FAM90A1Q86YD7 464 aa7.11□□□□□ -1.27
HDAC1-202ENST00000428704 PDZD9Q8IXQ8 264 aa7.11□□□□□ -1.27
HDAC1-202ENST00000428704 H1FOOQ8IZA3 346 aaPredicted RBP7.11□□□□□ -1.27
HDAC1-202ENST00000428704 BVESQ8NE79 360 aa7.11□□□□□ -1.27
HDAC1-202ENST00000428704 TOMM40LQ969M1 308 aa7.11□□□□□ -1.27
HDAC1-202ENST00000428704 ABHD14BQ96IU4 210 aa7.11□□□□□ -1.27
HDAC1-202ENST00000428704 AKR1E2Q96JD6 320 aa7.11□□□□□ -1.27
HDAC1-202ENST00000428704 ZNF488Q96MN9 340 aa7.11□□□□□ -1.27
HDAC1-202ENST00000428704 PLEKHA2Q9HB19 425 aa7.11□□□□□ -1.27
HDAC1-202ENST00000428704 CYTL1Q9NRR1 136 aa7.11□□□□□ -1.27
HDAC1-202ENST00000428704 IL36RNQ9UBH0 155 aa7.11□□□□□ -1.27
HDAC1-202ENST00000428704 DUX4Q9UBX2 424 aa7.11□□□□□ -1.27
HDAC1-202ENST00000428704 GLS2Q9UI32 602 aa7.11□□□□□ -1.27
HDAC1-202ENST00000428704 OR2W1Q9Y3N9 320 aa7.11□□□□□ -1.27
HDAC1-202ENST00000428704 A8MXK9 166 aa7.1□□□□□ -1.27
HDAC1-202ENST00000428704 DEDDO75618 318 aa7.1□□□□□ -1.27
HDAC1-202ENST00000428704 ZNF205O95201 554 aa7.1□□□□□ -1.27
HDAC1-202ENST00000428704 TPT1P13693 172 aaKnown RBP7.1□□□□□ -1.27
HDAC1-202ENST00000428704 ZNF44P15621 663 aa7.1□□□□□ -1.27
HDAC1-202ENST00000428704 UCP1P25874 307 aa7.1□□□□□ -1.27
HDAC1-202ENST00000428704 DUSP1P28562 367 aa7.1□□□□□ -1.27
HDAC1-202ENST00000428704 P2RX3P56373 397 aa7.1□□□□□ -1.27
HDAC1-202ENST00000428704 FXYD4P59646 89 aa7.1□□□□□ -1.27
HDAC1-202ENST00000428704 HMGN3Q15651 99 aa7.1□□□□□ -1.27
HDAC1-202ENST00000428704 MSMO1Q15800 293 aa7.1□□□□□ -1.27
HDAC1-202ENST00000428704 AANATQ16613 207 aa7.1□□□□□ -1.27
HDAC1-202ENST00000428704 FAM201AQ5SY85 155 aa7.1□□□□□ -1.27
HDAC1-202ENST00000428704 GPR157Q5UAW9 335 aa7.1□□□□□ -1.27
HDAC1-202ENST00000428704 PRAMEF6Q5VXH4 476 aa7.1□□□□□ -1.27
HDAC1-202ENST00000428704 SLC35E4Q6ICL7 350 aa7.1□□□□□ -1.27
HDAC1-202ENST00000428704 ALKAL2Q6UX46 152 aa7.1□□□□□ -1.27
HDAC1-202ENST00000428704 HSD17B13Q7Z5P4 300 aaPredicted RBP7.1□□□□□ -1.27
HDAC1-202ENST00000428704 MOGAT3Q86VF5 341 aa7.1□□□□□ -1.27
HDAC1-202ENST00000428704 BAP18Q8IXM2 172 aa7.1□□□□□ -1.27
HDAC1-202ENST00000428704 ZNF565Q8N9K5 539 aa7.1□□□□□ -1.27
HDAC1-202ENST00000428704 OR10Z1Q8NGY1 313 aa7.1□□□□□ -1.27
HDAC1-202ENST00000428704 OR1S1Q8NH92 325 aa7.1□□□□□ -1.27
HDAC1-202ENST00000428704 NEK7Q8TDX7 302 aa7.1□□□□□ -1.27
HDAC1-202ENST00000428704 DCUN1D4Q92564 292 aa7.1□□□□□ -1.27
HDAC1-202ENST00000428704 RRNAD1Q96FB5 475 aaKnown RBP7.1□□□□□ -1.27
HDAC1-202ENST00000428704 SLC5A7Q9GZV3 580 aa7.1□□□□□ -1.27
HDAC1-202ENST00000428704 TMEM222Q9H0R3 208 aa7.1□□□□□ -1.27
HDAC1-202ENST00000428704 PATZ1Q9HBE1 687 aaKnown RBP7.1□□□□□ -1.27
HDAC1-202ENST00000428704 WNK2Q9Y3S1 2297 aa7.1□□□□□ -1.27
HDAC1-202ENST00000428704 DNAH9Q9NYC9 4486 aa7.09□□□□□ -1.27
HDAC1-202ENST00000428704 SCO2A0A1W2PP80 73 aa7.09□□□□□ -1.27
HDAC1-202ENST00000428704 hCG_1807616A0A1W2PRN6 198 aa7.09□□□□□ -1.27
HDAC1-202ENST00000428704 MFSD2BA6NFX1 497 aa7.09□□□□□ -1.27
HDAC1-202ENST00000428704 E5RGE8 158 aa7.09□□□□□ -1.27
HDAC1-202ENST00000428704 CLDN34H7C241 214 aa7.09□□□□□ -1.27
HDAC1-202ENST00000428704 FGF16O43320 207 aa7.09□□□□□ -1.27
HDAC1-202ENST00000428704 NXPH2O95156 264 aa7.09□□□□□ -1.27
HDAC1-202ENST00000428704 SPDEFO95238 335 aa7.09□□□□□ -1.27
HDAC1-202ENST00000428704 FSTL3O95633 263 aa7.09□□□□□ -1.27
HDAC1-202ENST00000428704 FSHBP01225 129 aa7.09□□□□□ -1.27
HDAC1-202ENST00000428704 GAPDHP04406 335 aaKnown RBP7.09□□□□□ -1.27
HDAC1-202ENST00000428704 SLC25A6P12236 298 aa7.09□□□□□ -1.27
HDAC1-202ENST00000428704 S100GP29377 79 aa7.09□□□□□ -1.27
HDAC1-202ENST00000428704 LCN2P80188 198 aa7.09□□□□□ -1.27
HDAC1-202ENST00000428704 SMCO1Q147U7 214 aa7.09□□□□□ -1.27
HDAC1-202ENST00000428704 KPRPQ5T749 579 aaPredicted RBP7.09□□□□□ -1.27
HDAC1-202ENST00000428704 RUSC1-AS1Q66K80 236 aa7.09□□□□□ -1.27
HDAC1-202ENST00000428704 WDR82Q6UXN9 313 aa7.09□□□□□ -1.27
HDAC1-202ENST00000428704 ACP7Q6ZNF0 438 aa7.09□□□□□ -1.27
HDAC1-202ENST00000428704 LYZL2Q7Z4W2 148 aa7.09□□□□□ -1.27
HDAC1-202ENST00000428704 COMMD7Q86VX2 200 aa7.09□□□□□ -1.27
HDAC1-202ENST00000428704 CMTM1Q8IZ96 169 aa7.09□□□□□ -1.27
HDAC1-202ENST00000428704 FAM71E2Q8N5Q1 922 aa7.09□□□□□ -1.27
HDAC1-202ENST00000428704 ZBTB34Q8NCN2 500 aa7.09□□□□□ -1.27
HDAC1-202ENST00000428704 DEFB108BQ8NET1 73 aa7.09□□□□□ -1.27
HDAC1-202ENST00000428704 OR5T2Q8NGG2 359 aa7.09□□□□□ -1.27
HDAC1-202ENST00000428704 OR4D5Q8NGN0 318 aa7.09□□□□□ -1.27
HDAC1-202ENST00000428704 OR4F5Q8NH21 305 aa7.09□□□□□ -1.27
HDAC1-202ENST00000428704 OR10J5Q8NHC4 309 aa7.09□□□□□ -1.27
HDAC1-202ENST00000428704 Q8TCH9 128 aa7.09□□□□□ -1.27
HDAC1-202ENST00000428704 RBPMSQ93062 196 aaKnown RBP7.09□□□□□ -1.27
HDAC1-202ENST00000428704 KIRREL1Q96J84 757 aa7.09□□□□□ -1.27
HDAC1-202ENST00000428704 WWC2-AS2Q96NR7 200 aa7.09□□□□□ -1.27
HDAC1-202ENST00000428704 SPIN2AQ99865 258 aa7.09□□□□□ -1.27
HDAC1-202ENST00000428704 SPIN2BQ9BPZ2 258 aa7.09□□□□□ -1.27
HDAC1-202ENST00000428704 ZNF471Q9BX82 626 aaPredicted RBP7.09□□□□□ -1.27
HDAC1-202ENST00000428704 NCOR1P1Q9H4R4 102 aa7.09□□□□□ -1.27
HDAC1-202ENST00000428704 MMP26Q9NRE1 261 aa7.09□□□□□ -1.27
HDAC1-202ENST00000428704 PRR13Q9NZ81 148 aa7.09□□□□□ -1.27
HDAC1-202ENST00000428704 OR5AC2Q9NZP5 309 aa7.09□□□□□ -1.27
HDAC1-202ENST00000428704 GSKIPQ9P0R6 139 aa7.09□□□□□ -1.27
HDAC1-202ENST00000428704 PFDN2Q9UHV9 154 aa7.09□□□□□ -1.27
HDAC1-202ENST00000428704 POLR3KQ9Y2Y1 108 aaPredicted RBP7.09□□□□□ -1.27
HDAC1-202ENST00000428704 NSG2Q9Y328 171 aa7.09□□□□□ -1.27
HDAC1-202ENST00000428704 HYDINQ4G0P3 5121 aa7.09□□□□□ -1.27
HDAC1-202ENST00000428704 DOCK11Q5JSL3 2073 aa7.08□□□□□ -1.28
HDAC1-202ENST00000428704 PPIAL4EA0A075B759 164 aa7.08□□□□□ -1.28
HDAC1-202ENST00000428704 PPIAL4CA0A0B4J2A2 164 aa7.08□□□□□ -1.28
HDAC1-202ENST00000428704 IGKV1D-13A0A0B4J2D9 117 aa7.08□□□□□ -1.28
HDAC1-202ENST00000428704 NUDT19A8MXV4 375 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms