RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 RUNX1Q01196 453 aa8.6□□□□□ -1.03
HDAC9-210ENST00000428307 CT45A1Q5HYN5 189 aa8.6□□□□□ -1.03
HDAC9-210ENST00000428307 SPANXN5Q5MJ07 72 aa8.6□□□□□ -1.03
HDAC9-210ENST00000428307 TMEM182Q6ZP80 229 aaPredicted RBP8.6□□□□□ -1.03
HDAC9-210ENST00000428307 SSX9Q7RTT3 188 aa8.6□□□□□ -1.03
HDAC9-210ENST00000428307 STX12Q86Y82 276 aa8.6□□□□□ -1.03
HDAC9-210ENST00000428307 CT45A3Q8NHU0 189 aa8.6□□□□□ -1.03
HDAC9-210ENST00000428307 IFI27L2Q9H2X8 130 aa8.6□□□□□ -1.03
HDAC9-210ENST00000428307 MMP26Q9NRE1 261 aa8.6□□□□□ -1.03
HDAC9-210ENST00000428307 FAM96BQ9Y3D0 163 aa8.6□□□□□ -1.03
HDAC9-210ENST00000428307 PPIAL4AQ9Y536 164 aa8.6□□□□□ -1.03
HDAC9-210ENST00000428307 A0A1B0GV50 99 aa8.59□□□□□ -1.03
HDAC9-210ENST00000428307 DANCRP0C864 163 aa8.59□□□□□ -1.03
HDAC9-210ENST00000428307 APOBEC3AP31941 199 aaPredicted RBP8.59□□□□□ -1.03
HDAC9-210ENST00000428307 GNG10P50151 68 aa8.59□□□□□ -1.03
HDAC9-210ENST00000428307 BLOC1S1P78537 153 aa8.59□□□□□ -1.03
HDAC9-210ENST00000428307 DEFA5Q01523 94 aa8.59□□□□□ -1.03
HDAC9-210ENST00000428307 BAXQ07812 192 aa8.59□□□□□ -1.03
HDAC9-210ENST00000428307 PJVKQ0ZLH3 352 aa8.59□□□□□ -1.03
HDAC9-210ENST00000428307 MSMO1Q15800 293 aa8.59□□□□□ -1.03
HDAC9-210ENST00000428307 SPINK9Q5DT21 86 aa8.59□□□□□ -1.03
HDAC9-210ENST00000428307 H2BFWTQ7Z2G1 175 aa8.59□□□□□ -1.03
HDAC9-210ENST00000428307 VKORC1L1Q8N0U8 176 aa8.59□□□□□ -1.03
HDAC9-210ENST00000428307 OR2G3Q8NGZ4 309 aa8.59□□□□□ -1.03
HDAC9-210ENST00000428307 ZCCHC14Q8WYQ9 949 aaKnown RBP8.59□□□□□ -1.03
HDAC9-210ENST00000428307 ABHD14AQ9BUJ0 271 aa8.59□□□□□ -1.03
HDAC9-210ENST00000428307 MS4A5Q9H3V2 200 aa8.59□□□□□ -1.03
HDAC9-210ENST00000428307 TREM1Q9NP99 234 aa8.59□□□□□ -1.03
HDAC9-210ENST00000428307 TMEM106BQ9NUM4 274 aa8.59□□□□□ -1.03
HDAC9-210ENST00000428307 GFOD1Q9NXC2 390 aa8.59□□□□□ -1.03
HDAC9-210ENST00000428307 SLC25A10Q9UBX3 287 aaPredicted RBP8.59□□□□□ -1.03
HDAC9-210ENST00000428307 MARCH11A6NNE9 402 aa8.59□□□□□ -1.03
HDAC9-210ENST00000428307 SIAH2O43255 324 aa8.59□□□□□ -1.03
HDAC9-210ENST00000428307 SULT1A1P50225 295 aa8.59□□□□□ -1.03
HDAC9-210ENST00000428307 TNFRSF9Q07011 255 aa8.59□□□□□ -1.03
HDAC9-210ENST00000428307 BTNL8Q6UX41 500 aa8.59□□□□□ -1.03
HDAC9-210ENST00000428307 LYPD2Q6UXB3 125 aa8.59□□□□□ -1.03
HDAC9-210ENST00000428307 UNQ6494/PRO21346Q6UXR6 183 aa8.59□□□□□ -1.03
HDAC9-210ENST00000428307 C1orf87Q8N0U7 546 aa8.59□□□□□ -1.03
HDAC9-210ENST00000428307 PARP11Q9NR21 331 aa8.59□□□□□ -1.03
HDAC9-210ENST00000428307 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.59□□□□□ -1.03
HDAC9-210ENST00000428307 ZNRD1Q9P1U0 126 aa8.59□□□□□ -1.03
HDAC9-210ENST00000428307 CACFD1Q9UGQ2 172 aa8.59□□□□□ -1.03
HDAC9-210ENST00000428307 NUP50Q9UKX7 468 aa8.59□□□□□ -1.03
HDAC9-210ENST00000428307 SPTBN1Q01082 2364 aaKnown RBP8.59□□□□□ -1.04
HDAC9-210ENST00000428307 TMEM218A2RU14 115 aa8.58□□□□□ -1.04
HDAC9-210ENST00000428307 NKX6-3A6NJ46 265 aa8.58□□□□□ -1.04
HDAC9-210ENST00000428307 ATG12O94817 140 aa8.58□□□□□ -1.04
HDAC9-210ENST00000428307 CAMLGP49069 296 aa8.58□□□□□ -1.04
HDAC9-210ENST00000428307 RPL31P62899 125 aaKnown RBP8.58□□□□□ -1.04
HDAC9-210ENST00000428307 ARL16Q0P5N6 197 aa8.58□□□□□ -1.04
HDAC9-210ENST00000428307 BTN1A1Q13410 526 aa8.58□□□□□ -1.04
HDAC9-210ENST00000428307 MIDNQ504T8 468 aa8.58□□□□□ -1.04
HDAC9-210ENST00000428307 PRAMEF5Q5TYX0 476 aa8.58□□□□□ -1.04
HDAC9-210ENST00000428307 UQCC3Q6UW78 93 aa8.58□□□□□ -1.04
HDAC9-210ENST00000428307 LYG1Q8N1E2 194 aa8.58□□□□□ -1.04
HDAC9-210ENST00000428307 RBKSQ9H477 322 aa8.58□□□□□ -1.04
HDAC9-210ENST00000428307 C19orf12Q9NSK7 152 aa8.58□□□□□ -1.04
HDAC9-210ENST00000428307 COA4Q9NYJ1 87 aa8.58□□□□□ -1.04
HDAC9-210ENST00000428307 hADV38S2A0JD32 116 aa8.58□□□□□ -1.04
HDAC9-210ENST00000428307 LYNX1G3V0Z9 82 aa8.58□□□□□ -1.04
HDAC9-210ENST00000428307 FCN3O75636 299 aa8.58□□□□□ -1.04
HDAC9-210ENST00000428307 P0C879 139 aa8.58□□□□□ -1.04
HDAC9-210ENST00000428307 LYNX1P0DP58 116 aa8.58□□□□□ -1.04
HDAC9-210ENST00000428307 F2RL1P55085 397 aa8.58□□□□□ -1.04
HDAC9-210ENST00000428307 RPS16P62249 146 aaKnown RBP8.58□□□□□ -1.04
HDAC9-210ENST00000428307 ZNF273Q14593 569 aa8.58□□□□□ -1.04
HDAC9-210ENST00000428307 OR8G2PQ6IF36 304 aa8.58□□□□□ -1.04
HDAC9-210ENST00000428307 SLC25A24Q6NUK1 477 aa8.58□□□□□ -1.04
HDAC9-210ENST00000428307 ATRAIDQ6UW56 229 aa8.58□□□□□ -1.04
HDAC9-210ENST00000428307 IL34Q6ZMJ4 242 aa8.58□□□□□ -1.04
HDAC9-210ENST00000428307 FAM213BQ8TBF2 198 aa8.58□□□□□ -1.04
HDAC9-210ENST00000428307 H1FXQ92522 213 aaKnown RBP8.58□□□□□ -1.04
HDAC9-210ENST00000428307 ZDHHC16Q969W1 377 aa8.58□□□□□ -1.04
HDAC9-210ENST00000428307 R3HDM4Q96D70 268 aa8.58□□□□□ -1.04
HDAC9-210ENST00000428307 ATP5SQ99766 215 aa8.58□□□□□ -1.04
HDAC9-210ENST00000428307 NCOR1P1Q9H4R4 102 aa8.58□□□□□ -1.04
HDAC9-210ENST00000428307 SAA2-SAA4A0A096LPE2 208 aa8.57□□□□□ -1.04
HDAC9-210ENST00000428307 B9A039 149 aa8.57□□□□□ -1.04
HDAC9-210ENST00000428307 TSPAN15O95858 294 aa8.57□□□□□ -1.04
HDAC9-210ENST00000428307 SAA2P0DJI9 122 aaPredicted RBP8.57□□□□□ -1.04
HDAC9-210ENST00000428307 CCL3L1P16619 93 aa8.57□□□□□ -1.04
HDAC9-210ENST00000428307 HNF4GQ14541 408 aa8.57□□□□□ -1.04
HDAC9-210ENST00000428307 FBXL19-AS1Q494R0 122 aa8.57□□□□□ -1.04
HDAC9-210ENST00000428307 MUC15Q8N387 334 aa8.57□□□□□ -1.04
HDAC9-210ENST00000428307 TCTEX1D1Q8N7M0 179 aa8.57□□□□□ -1.04
HDAC9-210ENST00000428307 CD300LFQ8TDQ1 290 aa8.57□□□□□ -1.04
HDAC9-210ENST00000428307 S1PR3Q99500 378 aa8.57□□□□□ -1.04
HDAC9-210ENST00000428307 RAB9BQ9NP90 201 aa8.57□□□□□ -1.04
HDAC9-210ENST00000428307 IDI2-AS1Q9NZ38 188 aa8.57□□□□□ -1.04
HDAC9-210ENST00000428307 HSPB7Q9UBY9 170 aa8.57□□□□□ -1.04
HDAC9-210ENST00000428307 LAMP3Q9UQV4 416 aa8.57□□□□□ -1.04
HDAC9-210ENST00000428307 ZNF729A6NN14 1252 aaPredicted RBP8.57□□□□□ -1.04
HDAC9-210ENST00000428307 RAB29O14966 203 aa8.57□□□□□ -1.04
HDAC9-210ENST00000428307 NUPL2O15504 423 aaKnown RBP8.57□□□□□ -1.04
HDAC9-210ENST00000428307 ZG16O60844 167 aa8.57□□□□□ -1.04
HDAC9-210ENST00000428307 HPRT1P00492 218 aa8.57□□□□□ -1.04
HDAC9-210ENST00000428307 OR9G9P0C7N8 305 aa8.57□□□□□ -1.04
HDAC9-210ENST00000428307 RAB7AP51149 207 aa8.57□□□□□ -1.04
HDAC9-210ENST00000428307 OR2B8PP59922 312 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms