RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 ANKUB1A6NFN9 424 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 IFNL4K9M1U5 179 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 ZNF324O75467 553 aaPredicted RBP4.35□□□□□ -1.71
RIF1-203ENST00000428287 GYPAP02724 150 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 OR1L1Q8NH94 360 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 NUDT11Q96G61 164 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 SFXN3Q9BWM7 321 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 SMPXQ9UHP9 88 aa4.35□□□□□ -1.71
RIF1-203ENST00000428287 A0A1W2PRS3 328 aa4.34□□□□□ -1.71
RIF1-203ENST00000428287 LILRA5A6NI73 299 aa4.34□□□□□ -1.71
RIF1-203ENST00000428287 H3BP45 60 aa4.34□□□□□ -1.71
RIF1-203ENST00000428287 CCL16O15467 120 aa4.34□□□□□ -1.71
RIF1-203ENST00000428287 IFNA5P01569 189 aa4.34□□□□□ -1.71
RIF1-203ENST00000428287 RBM11P57052 281 aaKnown RBP4.34□□□□□ -1.71
RIF1-203ENST00000428287 ZNF154Q13106 437 aa4.34□□□□□ -1.71
RIF1-203ENST00000428287 ACSM6Q6P461 480 aa4.34□□□□□ -1.71
RIF1-203ENST00000428287 C17orf78Q8N4C9 275 aa4.34□□□□□ -1.71
RIF1-203ENST00000428287 OR1L6Q8NGR2 347 aa4.34□□□□□ -1.71
RIF1-203ENST00000428287 DEGS1O15121 323 aa4.34□□□□□ -1.71
RIF1-203ENST00000428287 IGLV2-14P01704 120 aa4.34□□□□□ -1.71
RIF1-203ENST00000428287 CEBPGP53567 150 aa4.34□□□□□ -1.71
RIF1-203ENST00000428287 CARD18P57730 90 aa4.34□□□□□ -1.71
RIF1-203ENST00000428287 TPPP2P59282 170 aa4.34□□□□□ -1.71
RIF1-203ENST00000428287 WDR74Q6RFH5 385 aaPredicted RBP4.34□□□□□ -1.71
RIF1-203ENST00000428287 CD207Q9UJ71 328 aa4.34□□□□□ -1.71
RIF1-203ENST00000428287 UBE2J1Q9Y385 318 aaPredicted RBP4.34□□□□□ -1.71
RIF1-203ENST00000428287 IGKV1-39P01597 117 aa4.34□□□□□ -1.71
RIF1-203ENST00000428287 IGKV1D-39P04432 117 aa4.34□□□□□ -1.71
RIF1-203ENST00000428287 THEGLP0DJG4 465 aa4.34□□□□□ -1.71
RIF1-203ENST00000428287 MALLQ13021 153 aa4.34□□□□□ -1.71
RIF1-203ENST00000428287 SHBQ15464 509 aa4.34□□□□□ -1.71
RIF1-203ENST00000428287 TMEM150CB9EJG8 249 aa4.34□□□□□ -1.71
RIF1-203ENST00000428287 CORTO00230 105 aa4.34□□□□□ -1.71
RIF1-203ENST00000428287 IL11P20809 199 aa4.34□□□□□ -1.71
RIF1-203ENST00000428287 CDKN1AP38936 164 aa4.34□□□□□ -1.71
RIF1-203ENST00000428287 LGALS4P56470 323 aa4.34□□□□□ -1.71
RIF1-203ENST00000428287 OR10J3Q5JRS4 329 aa4.34□□□□□ -1.71
RIF1-203ENST00000428287 MEX3BQ6ZN04 569 aaKnown RBP4.34□□□□□ -1.71
RIF1-203ENST00000428287 ZNF818PQ6ZRF7 136 aa4.34□□□□□ -1.71
RIF1-203ENST00000428287 ZNF695Q8IW36 515 aa4.34□□□□□ -1.71
RIF1-203ENST00000428287 NRN1Q9NPD7 142 aa4.34□□□□□ -1.71
RIF1-203ENST00000428287 RNF114Q9Y508 228 aa4.34□□□□□ -1.71
RIF1-203ENST00000428287 TMEM189A5PLL7 270 aa4.34□□□□□ -1.72
RIF1-203ENST00000428287 C2orf70A6NJV1 201 aa4.34□□□□□ -1.72
RIF1-203ENST00000428287 GDF1P27539 372 aa4.34□□□□□ -1.72
RIF1-203ENST00000428287 ASCL1P50553 236 aa4.34□□□□□ -1.72
RIF1-203ENST00000428287 GFRA1P56159 465 aa4.34□□□□□ -1.72
RIF1-203ENST00000428287 FXYD4P59646 89 aa4.34□□□□□ -1.72
RIF1-203ENST00000428287 MSMO1Q15800 293 aa4.34□□□□□ -1.72
RIF1-203ENST00000428287 RASL11AQ6T310 242 aa4.34□□□□□ -1.72
RIF1-203ENST00000428287 FBXL7Q9UJT9 491 aa4.34□□□□□ -1.72
RIF1-203ENST00000428287 PRKNO60260 465 aaPredicted RBP4.34□□□□□ -1.72
RIF1-203ENST00000428287 AMTP48728 403 aa4.34□□□□□ -1.72
RIF1-203ENST00000428287 RHOBP62745 196 aa4.34□□□□□ -1.72
RIF1-203ENST00000428287 SPIN3Q5JUX0 258 aa4.34□□□□□ -1.72
RIF1-203ENST00000428287 ZNF705AQ6ZN79 300 aaPredicted RBP4.34□□□□□ -1.72
RIF1-203ENST00000428287 MMABQ96EY8 250 aaPredicted RBP4.34□□□□□ -1.72
RIF1-203ENST00000428287 CCDC74BQ96LY2 380 aa4.34□□□□□ -1.72
RIF1-203ENST00000428287 NXT1Q9UKK6 140 aaKnown RBP4.34□□□□□ -1.72
RIF1-203ENST00000428287 WDR83OSQ9Y284 106 aa4.34□□□□□ -1.72
RIF1-203ENST00000428287 TRAPPC1Q9Y5R8 145 aa4.34□□□□□ -1.72
RIF1-203ENST00000428287 A0A0U1RQK1 487 aa4.33□□□□□ -1.72
RIF1-203ENST00000428287 ZNF320A2RRD8 509 aa4.33□□□□□ -1.72
RIF1-203ENST00000428287 CBLN1P23435 193 aa4.33□□□□□ -1.72
RIF1-203ENST00000428287 FGF12P61328 243 aa4.33□□□□□ -1.72
RIF1-203ENST00000428287 LRP5LA4QPB2 252 aa4.33□□□□□ -1.72
RIF1-203ENST00000428287 BMPR1BO00238 502 aa4.33□□□□□ -1.72
RIF1-203ENST00000428287 TLX3O43711 291 aaPredicted RBP4.33□□□□□ -1.72
RIF1-203ENST00000428287 NEGR1Q7Z3B1 354 aa4.33□□□□□ -1.72
RIF1-203ENST00000428287 LHFPL4Q7Z7J7 247 aa4.33□□□□□ -1.72
RIF1-203ENST00000428287 ZNF114Q8NC26 417 aa4.33□□□□□ -1.72
RIF1-203ENST00000428287 APH1AQ96BI3 265 aa4.33□□□□□ -1.72
RIF1-203ENST00000428287 OXGR1Q96P68 337 aa4.33□□□□□ -1.72
RIF1-203ENST00000428287 QTRT1Q9BXR0 403 aaKnown RBP4.33□□□□□ -1.72
RIF1-203ENST00000428287 OR2W1Q9Y3N9 320 aa4.33□□□□□ -1.72
RIF1-203ENST00000428287 GAGE12BA1L429 117 aa4.33□□□□□ -1.72
RIF1-203ENST00000428287 RPL31P62899 125 aaKnown RBP4.33□□□□□ -1.72
RIF1-203ENST00000428287 RPL19P84098 196 aaKnown RBP4.33□□□□□ -1.72
RIF1-203ENST00000428287 FBLN7Q53RD9 439 aa4.33□□□□□ -1.72
RIF1-203ENST00000428287 KLHDC7BQ96G42 594 aa4.33□□□□□ -1.72
RIF1-203ENST00000428287 VSIRQ9H7M9 311 aa4.33□□□□□ -1.72
RIF1-203ENST00000428287 ST20Q9HBF5 79 aa4.33□□□□□ -1.72
RIF1-203ENST00000428287 ITPR3Q14573 2671 aa4.33□□□□□ -1.72
RIF1-203ENST00000428287 hCG_38984A0A1B0GV85 526 aa4.33□□□□□ -1.72
RIF1-203ENST00000428287 C9orf172C9J069 976 aa4.33□□□□□ -1.72
RIF1-203ENST00000428287 ANGPTL7O43827 346 aa4.33□□□□□ -1.72
RIF1-203ENST00000428287 OR7C1O76099 320 aaPredicted RBP4.33□□□□□ -1.72
RIF1-203ENST00000428287 ONECUT2O95948 504 aa4.33□□□□□ -1.72
RIF1-203ENST00000428287 IGLV3-19P01714 112 aa4.33□□□□□ -1.72
RIF1-203ENST00000428287 MSR1P21757 451 aa4.33□□□□□ -1.72
RIF1-203ENST00000428287 RUNX3Q13761 415 aa4.33□□□□□ -1.72
RIF1-203ENST00000428287 PDLIM3Q53GG5 364 aaPredicted RBP4.33□□□□□ -1.72
RIF1-203ENST00000428287 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.33□□□□□ -1.72
RIF1-203ENST00000428287 C12orf76Q8N812 135 aaPredicted RBP4.33□□□□□ -1.72
RIF1-203ENST00000428287 HOXC12P31275 282 aa4.33□□□□□ -1.72
RIF1-203ENST00000428287 FUT6P51993 359 aa4.33□□□□□ -1.72
RIF1-203ENST00000428287 TESK1Q15569 626 aa4.33□□□□□ -1.72
RIF1-203ENST00000428287 TBR1Q16650 682 aa4.33□□□□□ -1.72
RIF1-203ENST00000428287 NRN1LQ496H8 165 aa4.33□□□□□ -1.72
RIF1-203ENST00000428287 LDLRAD2Q5SZI1 272 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms