RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 RTL8BQ17RB0 113 aa12.15□□□□□ -0.46
VARS2-203ENST00000428017 C16orf82Q7Z2V1 217 aa12.15□□□□□ -0.46
VARS2-203ENST00000428017 SLC38A6Q8IZM9 456 aa12.15□□□□□ -0.46
VARS2-203ENST00000428017 OR5AN1Q8NGI8 311 aa12.15□□□□□ -0.46
VARS2-203ENST00000428017 TERB2Q8NHR7 220 aa12.15□□□□□ -0.46
VARS2-203ENST00000428017 HSD17B10Q99714 261 aaKnown RBP12.15□□□□□ -0.46
VARS2-203ENST00000428017 CCDC32Q9BV29 185 aa12.15□□□□□ -0.46
VARS2-203ENST00000428017 FXYD6Q9H0Q3 95 aa12.15□□□□□ -0.46
VARS2-203ENST00000428017 PRELID3BQ9Y3B1 194 aa12.15□□□□□ -0.46
VARS2-203ENST00000428017 FAM181BA6NEQ2 426 aa12.14□□□□□ -0.47
VARS2-203ENST00000428017 CENPXA8MT69 81 aa12.14□□□□□ -0.47
VARS2-203ENST00000428017 H0YJW9 148 aa12.14□□□□□ -0.47
VARS2-203ENST00000428017 GPR31O00270 319 aa12.14□□□□□ -0.47
VARS2-203ENST00000428017 TNFSF12O43508 249 aa12.14□□□□□ -0.47
VARS2-203ENST00000428017 PROP1O75360 226 aa12.14□□□□□ -0.47
VARS2-203ENST00000428017 RRASP10301 218 aa12.14□□□□□ -0.47
VARS2-203ENST00000428017 IL7P13232 177 aa12.14□□□□□ -0.47
VARS2-203ENST00000428017 CD40LGP29965 261 aa12.14□□□□□ -0.47
VARS2-203ENST00000428017 DUTP33316 252 aaKnown RBP12.14□□□□□ -0.47
VARS2-203ENST00000428017 RPL15P61313 204 aaKnown RBP12.14□□□□□ -0.47
VARS2-203ENST00000428017 CATR1Q13166 79 aa12.14□□□□□ -0.47
VARS2-203ENST00000428017 ABCA11PQ4W5N1 156 aa12.14□□□□□ -0.47
VARS2-203ENST00000428017 ZNF66Q6ZN08 573 aa12.14□□□□□ -0.47
VARS2-203ENST00000428017 ZNF818PQ6ZRF7 136 aa12.14□□□□□ -0.47
VARS2-203ENST00000428017 KCTD9Q7L273 389 aa12.14□□□□□ -0.47
VARS2-203ENST00000428017 ZNF383Q8NA42 475 aa12.14□□□□□ -0.47
VARS2-203ENST00000428017 OR51S1Q8NGJ8 323 aa12.14□□□□□ -0.47
VARS2-203ENST00000428017 TCTEX1D2Q8WW35 142 aa12.14□□□□□ -0.47
VARS2-203ENST00000428017 C5orf30Q96GV9 206 aa12.14□□□□□ -0.47
VARS2-203ENST00000428017 EAF1Q96JC9 268 aaPredicted RBP12.14□□□□□ -0.47
VARS2-203ENST00000428017 SLC25A33Q9BSK2 321 aa12.14□□□□□ -0.47
VARS2-203ENST00000428017 HRASLSQ9HDD0 168 aa12.14□□□□□ -0.47
VARS2-203ENST00000428017 SLC35D1Q9NTN3 355 aa12.14□□□□□ -0.47
VARS2-203ENST00000428017 LINC00854A0A1B0GVQ3 168 aa12.13□□□□□ -0.47
VARS2-203ENST00000428017 NCBP2LA6PVI3 153 aaKnown RBP12.13□□□□□ -0.47
VARS2-203ENST00000428017 RNF212BA8MTL3 300 aa12.13□□□□□ -0.47
VARS2-203ENST00000428017 M0QZK8 103 aa12.13□□□□□ -0.47
VARS2-203ENST00000428017 OR2F2O95006 317 aa12.13□□□□□ -0.47
VARS2-203ENST00000428017 IGLV2-14P01704 120 aa12.13□□□□□ -0.47
VARS2-203ENST00000428017 GNRHRP30968 328 aa12.13□□□□□ -0.47
VARS2-203ENST00000428017 UCP3P55916 312 aa12.13□□□□□ -0.47
VARS2-203ENST00000428017 AADACL3Q5VUY0 350 aa12.13□□□□□ -0.47
VARS2-203ENST00000428017 CCBE1Q6UXH8 406 aaPredicted RBP12.13□□□□□ -0.47
VARS2-203ENST00000428017 IDO2Q6ZQW0 420 aa12.13□□□□□ -0.47
VARS2-203ENST00000428017 PDPNQ86YL7 162 aa12.13□□□□□ -0.47
VARS2-203ENST00000428017 POC5Q8NA72 575 aa12.13□□□□□ -0.47
VARS2-203ENST00000428017 BVESQ8NE79 360 aa12.13□□□□□ -0.47
VARS2-203ENST00000428017 OR8H1Q8NGG4 311 aa12.13□□□□□ -0.47
VARS2-203ENST00000428017 ZFAND1Q8TCF1 268 aa12.13□□□□□ -0.47
VARS2-203ENST00000428017 RBM14Q96PK6 669 aaKnown RBP12.13□□□□□ -0.47
VARS2-203ENST00000428017 SDHCQ99643 169 aaPredicted RBP12.13□□□□□ -0.47
VARS2-203ENST00000428017 NPFFR1Q9GZQ6 430 aa12.13□□□□□ -0.47
VARS2-203ENST00000428017 C1RLQ9NZP8 487 aa12.13□□□□□ -0.47
VARS2-203ENST00000428017 MOB4Q9Y3A3 225 aa12.13□□□□□ -0.47
VARS2-203ENST00000428017 CHST1O43916 411 aa12.12□□□□□ -0.47
VARS2-203ENST00000428017 ZNF735P0CB33 412 aa12.12□□□□□ -0.47
VARS2-203ENST00000428017 LINC00205P59089 165 aa12.12□□□□□ -0.47
VARS2-203ENST00000428017 EBI3Q14213 229 aa12.12□□□□□ -0.47
VARS2-203ENST00000428017 PHLDA2Q53GA4 152 aa12.12□□□□□ -0.47
VARS2-203ENST00000428017 LHFPL1Q86WI0 220 aa12.12□□□□□ -0.47
VARS2-203ENST00000428017 OR4C13Q8NGP0 309 aa12.12□□□□□ -0.47
VARS2-203ENST00000428017 FLYWCH2Q96CP2 140 aaKnown RBP12.12□□□□□ -0.47
VARS2-203ENST00000428017 SCGB3A2Q96PL1 93 aa12.12□□□□□ -0.47
VARS2-203ENST00000428017 SLC2A8Q9NY64 477 aa12.12□□□□□ -0.47
VARS2-203ENST00000428017 C14orf166Q9Y224 244 aaKnown RBP12.12□□□□□ -0.47
VARS2-203ENST00000428017 NAP1L6A6NFF2 107 aa12.11□□□□□ -0.47
VARS2-203ENST00000428017 LINC00473A8K010 186 aa12.11□□□□□ -0.47
VARS2-203ENST00000428017 FCGR3BO75015 233 aa12.11□□□□□ -0.47
VARS2-203ENST00000428017 RLN1P04808 185 aa12.11□□□□□ -0.47
VARS2-203ENST00000428017 KIR2DS2P43631 304 aa12.11□□□□□ -0.47
VARS2-203ENST00000428017 RPS16P62249 146 aaKnown RBP12.11□□□□□ -0.47
VARS2-203ENST00000428017 SURF2Q15527 256 aaPredicted RBP12.11□□□□□ -0.47
VARS2-203ENST00000428017 MMDQ15546 238 aa12.11□□□□□ -0.47
VARS2-203ENST00000428017 OR2B11Q5JQS5 317 aa12.11□□□□□ -0.47
VARS2-203ENST00000428017 OR51H1Q8NH63 302 aa12.11□□□□□ -0.47
VARS2-203ENST00000428017 MARCH1Q8TCQ1 289 aa12.11□□□□□ -0.47
VARS2-203ENST00000428017 TMEM158Q8WZ71 300 aa12.11□□□□□ -0.47
VARS2-203ENST00000428017 ZNF486Q96H40 463 aaPredicted RBP12.11□□□□□ -0.47
VARS2-203ENST00000428017 TSNAXQ99598 290 aaKnown RBP12.11□□□□□ -0.47
VARS2-203ENST00000428017 RNF5Q99942 180 aa12.11□□□□□ -0.47
VARS2-203ENST00000428017 C7orf50Q9BRJ6 194 aaKnown RBP12.11□□□□□ -0.47
VARS2-203ENST00000428017 RSRP1Q9BUV0 290 aa12.11□□□□□ -0.47
VARS2-203ENST00000428017 KIAA1456Q9P272 454 aa12.11□□□□□ -0.47
VARS2-203ENST00000428017 JMJD1CQ15652 2540 aa12.1□□□□□ -0.47
VARS2-203ENST00000428017 SETD2Q9BYW2 2564 aaPredicted RBP12.1□□□□□ -0.47
VARS2-203ENST00000428017 MXRA5Q9NR99 2828 aa12.1□□□□□ -0.47
VARS2-203ENST00000428017 PEX14O75381 377 aa12.1□□□□□ -0.47
VARS2-203ENST00000428017 PGLYRP1O75594 196 aaPredicted RBP12.1□□□□□ -0.47
VARS2-203ENST00000428017 RPL30P62888 115 aaKnown RBP12.1□□□□□ -0.47
VARS2-203ENST00000428017 ARSJQ5FYB0 599 aaPredicted RBP12.1□□□□□ -0.47
VARS2-203ENST00000428017 CCDC71LQ8N9Z2 235 aa12.1□□□□□ -0.47
VARS2-203ENST00000428017 OR13C8Q8NGS7 320 aa12.1□□□□□ -0.47
VARS2-203ENST00000428017 OR4S2Q8NH73 311 aa12.1□□□□□ -0.47
VARS2-203ENST00000428017 GPHA2Q96T91 129 aa12.1□□□□□ -0.47
VARS2-203ENST00000428017 LIN7CQ9NUP9 197 aaKnown RBP12.1□□□□□ -0.47
VARS2-203ENST00000428017 COPZ2Q9P299 210 aa12.1□□□□□ -0.47
VARS2-203ENST00000428017 NIPBLQ6KC79 2804 aaeCLIP12.1□□□□□ -0.47
VARS2-203ENST00000428017 SHOXO15266 292 aa12.09□□□□□ -0.47
VARS2-203ENST00000428017 NBR2O15453 112 aa12.09□□□□□ -0.47
VARS2-203ENST00000428017 FGF16O43320 207 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms